tRNA genes clustered and arranged according to each identical group

viral fraction from Bay of British Colombia

Anticodon = CAG

HIT: 1 Group(s).
Download Sequence Representative sequence of each cluster
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Sort by Identical group No. Sort by the number of tRNAs in the Identical group
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Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.185812 (62 seq.)
>W1710864442 LMFW01000001 Alphaproteobacteria Mesorhizobium sp. Root1471 [LMFW] 2944832 2944748 - Leu CAG [ENA] ¡û
>W1710864648 LMGA01000001 Alphaproteobacteria Mesorhizobium sp. Root554 [LMGA] 2944190 2944106 - Leu CAG [ENA] ¡û
>W1711224166 LXTV01000097 Alphaproteobacteria Hyphomonas sp. ND6WE1B [LXTV] 11969 12053 + Leu CAG [ENA] ¡û
>W1711357147 MDHA01000065 Alphaproteobacteria Thioclava sp. SK-1 [MDHA] 36147 36063 - Leu CAG [ENA] ¡û
>W1711505945 MKVZ01000003 Alphaproteobacteria Rhizobiales bacterium 63-22 [MKVZ] 21842 21926 + Leu CAG [ENA] ¡û
>W131224025 AUCM01000008 Alphaproteobacteria Gemmobacter nectariphilus DSM 15620 [AUCM] 110455 110539 + Leu CAG [ENA] ¡û
>W131224026 AUCM01000008 Alphaproteobacteria Gemmobacter nectariphilus DSM 15620 [AUCM] 110672 110756 + Leu CAG [ENA] ¡û
>W131242040 CAAF010000008 Alphaproteobacteria Mesorhizobium sp. STM 4661 [CAAF] 63244 63328 + Leu CAG [ENA] ¡û
>W131250130 CAUM01000027 Alphaproteobacteria Mesorhizobium metallidurans STM 2683 [CAUM] 22345 22429 + Leu CAG [ENA] ¡û
>WENV180282436 OBIC01000001 [OBIC] beach sand metagenome; beach sand 139658 139574 - Leu CAG [ENA] ¢þ
>WENV180293500 OBIY01000001 [OBIY] beach sand metagenome; beach sand 60048 59964 - Leu CAG [ENA] ¢þ
>WENV180309270 OBJS01000007 [OBJS] beach sand metagenome; beach sand 39947 40031 + Leu CAG [ENA] ¢þ
>W141066774 ARYH01000001 Alphaproteobacteria Hyphomonas adhaerens MHS-3 [ARYH] 1228264 1228180 - Leu CAG [ENA] ¡û
>W141066856 ARYJ01000005 Alphaproteobacteria Hyphomonas jannaschiana VP2 [ARYJ] 233373 233289 - Leu CAG [ENA] ¡û
>W141136047 AWFD01000001 Alphaproteobacteria Hyphomonas sp. CY54-11-8 [AWFD] 590516 590432 - Leu CAG [ENA] ¡û
>W141150776 AXAQ01000006 Cyanobacteriota Mastigocoleus testarum BC008 [AXAQ] 220587 220671 + Leu CAG [ENA] ¡û
>W141237275 BBJC01000001 Alphaproteobacteria Falsirhodobacter sp. alg1 [BBJC] 595949 596033 + Leu CAG [ENA] ¡û
>WENV182400532 OIEQ01000587 [OIEQ] human gut metagenome; human gut 16944 16860 - Leu CAG [ENA] ¢þ
>WENV182400792 OIER01000030 [OIER] human gut metagenome; human gut 26916 27000 + Leu CAG [ENA] ¢þ
>WENV182947098 OKVL01001232 [OKVL] human gut metagenome; human gut 4982 4898 - Leu CAG [ENA] ¢þ
>WENV182948058 OKVN01001477 [OKVN] human gut metagenome; human gut 2712 2628 - Leu CAG [ENA] ¢þ
>ENV08000183 ABLX01245021 viral fraction from Bay of British Colombia 86 2 - Leu CAG [ENA] ¡û
>ENV08002585 ABPY01002868 microbial mat metagenome; Guerrero Negro Hypersaline Mat 10; altitude 310m AMSL; sample depth 1m below water level, 34-49mm depth into the mat 447 531 + Leu CAG [ENA] ¡û
>WENV170229012 CEQG01063987 [CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 24379 24463 + Leu CAG [ENA] ¢þ
>WENV170528704 CEWJ01066119 [CEWJ] marine metagenome genome assembly TARA_128_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 8430 8514 + Leu CAG [ENA] ¢þ
>WENV170779537 LZQP01000546 [LZQP] oil field metagenome; sample BH-FW-16 from oil reservoir 1833 1749 - Leu CAG [ENA] ¢þ
>WENV170813623 MDSW01203614 [MDSW] marine metagenome; seawater 7451 7367 - Leu CAG [ENA] ¢þ
>WENV170878514 MDTC01078184 [MDTC] marine metagenome; seawater 2126 2210 + Leu CAG [ENA] ¢þ
>WENV170900538 MDTD01155766 [MDTD] marine metagenome; seawater 28718 28802 + Leu CAG [ENA] ¢þ
>WENV170934104 MDTG01232489 [MDTG] marine metagenome; seawater 4376 4460 + Leu CAG [ENA] ¢þ
>WENV170940654 MDTG01346867 [MDTG] marine metagenome; seawater 1 85 + Leu CAG [ENA] ¢þ
>WENV170942699 MDTG01382761 [MDTG] marine metagenome; seawater 8051 8135 + Leu CAG [ENA] ¢þ
>WENV170962130 MRWF01006625 [MRWF] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 62135 62051 - Leu CAG [ENA] ¢þ
>WENV170963413 MRWG01000167 [MRWG] biofilm metagenome; microbial consortium enriched at the cathode of a solar microbial fuel cell 63791 63707 - Leu CAG [ENA] ¢þ
>W141485027 JFZB01000005 Alphaproteobacteria Paenirhodobacter enshiensis [JFZB] 144534 144618 + Leu CAG [ENA] ¡û
>C181029159 CP017940 Alphaproteobacteria Phyllobacterium zundukense Tri-48; RCAM 03910 [CP017940] 3699872 3699956 + Leu CAG - ¡û
>W141702373 JMLL01000010 Alphaproteobacteria Phyllobacterium sp. UNC302MFCol5.2 [JMLL] 1289270 1289354 + Leu CAG [ENA] ¡û
>W1910004728 AWFE01000082 Alphaproteobacteria Hyphomonas sp. GM-8P [AWFE] 9100 9016 - Leu CAG [ENA] ¡û
>W1910443007 FWFS01000001 Alphaproteobacteria Aquimixticola soesokkakensis CECT 8620 [FWFS] 45404 45488 + Leu CAG [ENA] ¡û
>W1910547063 FZNM01000003 Alphaproteobacteria Paracoccus sediminis DSM 26170 [FZNM] 419982 420066 + Leu CAG [ENA] ¡û
>W1910574822 JQHS01000001 Alphaproteobacteria Falsirhodobacter deserti W402 [JQHS] 68031 67947 - Leu CAG [ENA] ¡û
>W1910839903 MZMT01000049 Alphaproteobacteria Phyllobacterium zundukense Tri-38 [MZMT] 23533 23449 - Leu CAG [ENA] ¡û
>W1911397906 NWMQ01000006 Alphaproteobacteria Paracoccus sp. SY [NWMQ] 66231 66315 + Leu CAG [ENA] ¡û
>W1911405024 NWQG01000120 Alphaproteobacteria Mesorhizobium sanjuanii BSA136 [NWQG] 36247 36163 - Leu CAG [ENA] ¡û
>W1911495377 OBMT01000016 Alphaproteobacteria Rhodobacter maris JA276 [OBMT] 36465 36549 + Leu CAG [ENA] ¡û
>W1810090779 PGGM01000001 Alphaproteobacteria Phyllobacterium sophorae CCBAU 03422 [PGGM] 442666 442582 - Leu CAG [ENA] ¡û
>W1810090823 PGGN01000001 Alphaproteobacteria Phyllobacterium endophyticum PEPV15 [PGGN] 427586 427670 + Leu CAG [ENA] ¡û
>W1810090899 PGGO01000014 Alphaproteobacteria Phyllobacterium brassicacearum STM 196 [PGGO] 4740 4656 - Leu CAG [ENA] ¡û
>W1810346631 PVBT01000003 Alphaproteobacteria Phyllobacterium myrsinacearum DSM 5892 [PVBT] 202226 202310 + Leu CAG [ENA] ¡û
>W1810444871 PZJX01000047 Alphaproteobacteria Mesorhizobium helmanticense CSLC115N [PZJX] 65527 65611 + Leu CAG [ENA] ¡û
>W1810489515 QBBV01000003 Alphaproteobacteria Acuticoccus kandeliae J103 [QBBV] 579873 579789 - Leu CAG [ENA] ¡û
>W1810608828 QGTP01000003 Alphaproteobacteria Phyllobacterium myrsinacearum IAM 13584 [QGTP] 274315 274231 - Leu CAG [ENA] ¡û
>W1810692932 QLKY01000002 Alphaproteobacteria Phyllobacterium myrsinacearum HAMBI_1992 [QLKY] 408204 408120 - Leu CAG [ENA] ¡û
>W1810759528 QPJM01000004 Alphaproteobacteria Phyllobacterium bourgognense 31-25a [QPJM] 239797 239713 - Leu CAG [ENA] ¡û
>W121085132 AKIZ01000035 Alphaproteobacteria Phyllobacterium sp. YR531 [AKIZ] 214715 214631 - Leu CAG [ENA] ¡û
>W1610726788 LMFW01000001 Alphaproteobacteria Mesorhizobium sp. Root1471 [LMFW] 2944832 2944748 - Leu CAG [ENA] ¡û
>W1610726994 LMGA01000001 Alphaproteobacteria Mesorhizobium sp. Root554 [LMGA] 2944190 2944106 - Leu CAG [ENA] ¡û
>W1611008537 LXTV01000097 Alphaproteobacteria Hyphomonas sp. ND6WE1B [LXTV] 11969 12053 + Leu CAG [ENA] ¡û
>W1710524718 FNIY01000002 Alphaproteobacteria Phyllobacterium sp. OV277 [FNIY] 523515 523599 + Leu CAG [ENA] ¡û
>W1710525506 FNJP01000002 Alphaproteobacteria Phyllobacterium sp. YR620 [FNJP] 342636 342720 + Leu CAG [ENA] ¡û
>W1710565639 FORJ01000001 Alphaproteobacteria Phyllobacterium sp. CL33Tsu [FORJ] 1364200 1364284 + Leu CAG [ENA] ¡û
>W1710608924 FXBL01000004 Alphaproteobacteria Mesorhizobium australicum [FXBL] 868073 867989 - Leu CAG [ENA] ¡û
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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