tRNA genes clustered and arranged according to each identical group

Anticodon = CTC

HIT: 14 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.462875 (17 seq.)
>WENV170659611 JXWR01014323 [JXWR] soil metagenome; rice field; ambient CO2 73 145 + Glu CTC [ENA]
>R05100003 AP008207 Plant Oryza sativa Japonica Group 415058 415133 + Glu CTC [RAP-DB]
>R05100008 AP008207 Plant Oryza sativa Japonica Group 5768841 5768918 + Glu CTC [RAP-DB]
>R05100009 AP008207 Plant Oryza sativa Japonica Group 7433983 7434058 + Glu CTC [RAP-DB]
>R05100057 AP008207 Plant Oryza sativa Japonica Group 37531266 37531191 - Glu CTC [RAP-DB]
>R05100194 AP008208 Plant Oryza sativa Japonica Group 34479016 34478941 - Glu CTC [RAP-DB]
>R05100224 AP008208 Plant Oryza sativa Japonica Group 5215283 5215208 - Glu CTC [RAP-DB]
>R05100226 AP008208 Plant Oryza sativa Japonica Group 4371948 4371873 - Glu CTC [RAP-DB]
>R05100276 AP008209 Plant Oryza sativa Japonica Group 11597714 11597639 - Glu CTC [RAP-DB]
>R05100398 AP008211 Plant Oryza sativa Japonica Group 27721921 27721846 - Glu CTC [RAP-DB]
>R05100411 AP008211 Plant Oryza sativa Japonica Group 19532532 19532457 - Glu CTC [RAP-DB]
>R05100414 AP008211 Plant Oryza sativa Japonica Group 17755202 17755127 - Glu CTC [RAP-DB]
>R05100422 AP008211 Plant Oryza sativa Japonica Group 935413 935338 - Glu CTC [RAP-DB]
>R05100486 AP008213 Plant Oryza sativa Japonica Group 8234922 8234847 - Glu CTC [RAP-DB]
>R05100510 AP008214 Plant Oryza sativa Japonica Group 26040494 26040569 + Glu CTC [RAP-DB]
>R05100515 AP008214 Plant Oryza sativa Japonica Group 27919299 27919374 + Glu CTC [RAP-DB]
>R05100529 AP008215 Plant Oryza sativa Japonica Group 1167276 1167351 + Glu CTC [RAP-DB]
Identical group No.510286 (1 seq.)
>R05100255 AP008209 Plant Oryza sativa Japonica Group 35957822 35957897 + Glu CTC [RAP-DB]
Identical group No.510287 (1 seq.)
>R05100263 AP008209 Plant Oryza sativa Japonica Group 35281032 35280957 - Glu CTC [RAP-DB]
Identical group No.541260 (1 seq.)
>R05100058 AP008207 Plant Oryza sativa Japonica Group 37528206 37528131 - Glu CTC [RAP-DB]
Identical group No.541262 (1 seq.)
>R05300003 AP008207 Plant Oryza sativa Japonica Group 29860073 29860148 + Glu CTC [RAP-DB]
Identical group No.541263 (2 seq.)
>AD01000297 NC_003074 Plant Arabidopsis thaliana 18997715 18997642 - Glu CTC [TAIR]
>AD01000324 NC_003075 Plant Arabidopsis thaliana 7814202 7814274 + Glu CTC [TAIR]
Identical group No.541265 (1 seq.)
>AD01000330 NC_003075 Plant Arabidopsis thaliana 10302001 10302073 + Glu CTC [TAIR]
Identical group No.541269 (9 seq.)
>AD01000051 NC_003070 Plant Arabidopsis thaliana 10756722 10756794 + Glu CTC [TAIR]
>AD01000099 NC_003070 Plant Arabidopsis thaliana 28407984 28408056 + Glu CTC [TAIR]
>AD01000112 NC_003070 Plant Arabidopsis thaliana 28373561 28373489 - Glu CTC [TAIR]
>AD01000133 NC_003070 Plant Arabidopsis thaliana 10207378 10207306 - Glu CTC [TAIR]
>AD01000203 NC_003071 Plant Arabidopsis thaliana 18956641 18956713 + Glu CTC [TAIR]
>AD01000281 NC_003074 Plant Arabidopsis thaliana 22775922 22775994 + Glu CTC [TAIR]
>AD01000345 NC_003075 Plant Arabidopsis thaliana 16556623 16556695 + Glu CTC [TAIR]
>AD01000347 NC_003075 Plant Arabidopsis thaliana 17130052 17130124 + Glu CTC [TAIR]
>AD01000468 NC_003076 Plant Arabidopsis thaliana 3030889 3030817 - Glu CTC [TAIR]
Identical group No.564776 (1 seq.)
>R05100433 AP008212 Plant Oryza sativa Japonica Group 27587612 27587687 + Glu CTC [RAP-DB]
Identical group No.587034 (1 seq.)
>AD01000197 NC_003071 Plant Arabidopsis thaliana 15916817 15916889 + Glu CTC [TAIR]
Identical group No.604549 (1 seq.)
>R05100337 AP008210 Plant Oryza sativa Japonica Group 28170963 28170888 - Glu CTC [RAP-DB]
Identical group No.622085 (1 seq.)
>R05100405 AP008211 Plant Oryza sativa Japonica Group 22953824 22953747 - Glu CTC [RAP-DB]
Identical group No.648343 (1 seq.)
>R05100196 AP008208 Plant Oryza sativa Japonica Group 27532896 27532821 - Glu CTC [RAP-DB]
Identical group No.776276 (1 seq.)
>R05300078 AP008215 Plant Oryza sativa Japonica Group 1179632 1179706 + Glu CTC [RAP-DB]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK