tRNA genes clustered and arranged according to each identical group

Anticodon = CTT

HIT: 6 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.462872 (20 seq.)
>WENV181314477 OFJK01003625 [OFJK] marine metagenome; seawater 315 388 + Lys CTT [ENA]
>WENV170659731 JXWR01056084 [JXWR] soil metagenome; rice field; ambient CO2 73 1 - Lys CTT [ENA]
>WENV170659812 JXWR01136597 [JXWR] soil metagenome; rice field; ambient CO2 346 418 + Lys CTT [ENA]
>WENV170659955 JXWS01055810 [JXWS] soil metagenome; rice field; elevated CO2 256 330 + Lys CTT [ENA]
>R05100021 AP008207 Plant Oryza sativa Japonica Group 31952926 31953001 + Lys CTT [RAP-DB]
>R05100034 AP008207 Plant Oryza sativa Japonica Group 37844893 37844968 + Lys CTT [RAP-DB]
>R05100044 AP008207 Plant Oryza sativa Japonica Group 44968283 44968360 + Lys CTT [RAP-DB]
>R05100099 AP008217 Plant Oryza sativa Japonica Group 31024107 31024182 + Lys CTT [RAP-DB]
>R05100144 AP008218 Plant Oryza sativa Japonica Group 23972021 23971946 - Lys CTT [RAP-DB]
>R05100241 AP008209 Plant Oryza sativa Japonica Group 17510980 17511055 + Lys CTT [RAP-DB]
>R05100400 AP008211 Plant Oryza sativa Japonica Group 26510265 26510190 - Lys CTT [RAP-DB]
>R05100401 AP008211 Plant Oryza sativa Japonica Group 26012851 26012776 - Lys CTT [RAP-DB]
>R05100415 AP008211 Plant Oryza sativa Japonica Group 16377382 16377307 - Lys CTT [RAP-DB]
>R05100504 AP008214 Plant Oryza sativa Japonica Group 19723672 19723747 + Lys CTT [RAP-DB]
>R05100505 AP008214 Plant Oryza sativa Japonica Group 19734548 19734623 + Lys CTT [RAP-DB]
>R05100506 AP008214 Plant Oryza sativa Japonica Group 19966037 19966112 + Lys CTT [RAP-DB]
>R05100535 AP008215 Plant Oryza sativa Japonica Group 13406475 13406550 + Lys CTT [RAP-DB]
>R05100555 AP008215 Plant Oryza sativa Japonica Group 11490408 11490333 - Lys CTT [RAP-DB]
>R05100587 AP008216 Plant Oryza sativa Japonica Group 21626237 21626162 - Lys CTT [RAP-DB]
>R05100594 AP008216 Plant Oryza sativa Japonica Group 17261396 17261321 - Lys CTT [RAP-DB]
Identical group No.530767 (2 seq.)
>WENV180798249 ODJB01376837 [ODJB] human metagenome; G_DNA_Supragingival plaque 151 223 + Lys CTT [ENA]
>AD01000252 NC_003074 Plant Arabidopsis thaliana 5632852 5632925 + Lys CTT [TAIR]
Identical group No.536281 (20 seq.)
>WENV181320279 OFKG01006291 [OFKG] marine metagenome; seawater 724 650 - Lys CTT [ENA]
>WENV170481693 CEVL01319056 [CEVL] marine metagenome genome assembly TARA_146_SRF_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 795 723 - Lys CTT [ENA]
>WENV170501464 CEVU01122068 [CEVU] marine metagenome genome assembly TARA_151_DCM_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx) 666 592 - Lys CTT [ENA]
>WENV170660068 JXWS01127334 [JXWS] soil metagenome; rice field; elevated CO2 111 39 - Lys CTT [ENA]
>AD01000003 NC_003070 Plant Arabidopsis thaliana 604402 604474 + Lys CTT [TAIR]
>AD01000023 NC_003070 Plant Arabidopsis thaliana 7016516 7016589 + Lys CTT [TAIR]
>AD01000061 NC_003070 Plant Arabidopsis thaliana 17731840 17731914 + Lys CTT [TAIR]
>AD01000142 NC_003070 Plant Arabidopsis thaliana 5518134 5518062 - Lys CTT [TAIR]
>AD01000155 NC_003070 Plant Arabidopsis thaliana 309347 309275 - Lys CTT [TAIR]
>AD01000202 NC_003071 Plant Arabidopsis thaliana 18703678 18703750 + Lys CTT [TAIR]
>AD01000260 NC_003074 Plant Arabidopsis thaliana 11959167 11959240 + Lys CTT [TAIR]
>AD01000290 NC_003074 Plant Arabidopsis thaliana 22470313 22470241 - Lys CTT [TAIR]
>AD01000293 NC_003074 Plant Arabidopsis thaliana 20813589 20813517 - Lys CTT [TAIR]
>AD01000315 NC_003075 Plant Arabidopsis thaliana 33800 33872 + Lys CTT [TAIR]
>AD01000322 NC_003075 Plant Arabidopsis thaliana 7256415 7256487 + Lys CTT [TAIR]
>AD01000325 NC_003075 Plant Arabidopsis thaliana 8979656 8979729 + Lys CTT [TAIR]
>AD01000366 NC_003075 Plant Arabidopsis thaliana 11954813 11954741 - Lys CTT [TAIR]
>AD01000392 NC_003076 Plant Arabidopsis thaliana 4530474 4530546 + Lys CTT [TAIR]
>AD01000478 NC_003076 Plant Arabidopsis thaliana 508502 508430 - Lys CTT [TAIR]
>WENV032577 AACY021455279 Marine microbial communities from Global Ocean Sampling (GOS) 590 515 - Lys CTT [ENA]
Identical group No.541271 (1 seq.)
>AD01000364 NC_003075 Plant Arabidopsis thaliana 13006306 13006234 - Lys CTT [TAIR]
Identical group No.604542 (1 seq.)
>R05100136 AP008218 Plant Oryza sativa Japonica Group 23647958 23648033 + Lys CTT [RAP-DB]
Identical group No.641891 (1 seq.)
>R05100588 AP008216 Plant Oryza sativa Japonica Group 21626004 21625929 - Lys CTT [RAP-DB]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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