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tRNA genes clustered and arranged according to each identical group

Anticodon = GCA

HIT: 17 Group(s).

Download Sequence	Representative sequence of each cluster
View ClustalW result

Sort by Identical group No.

Sort by the number of tRNAs in the Identical group

Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.687900 (3 seq.)
	>R05100081	AP008207	Plant	Oryza sativa Japonica Group	3515760	3515686	-	Cys	GCA	[RAP-DB]	○
	>R05100252	AP008209	Plant	Oryza sativa Japonica Group	33687925	33688001	+	Cys	GCA	[RAP-DB]	○
	>AD01000412	NC_003076	Plant	Arabidopsis thaliana	18907523	18907594	+	Cys	GCA	[TAIR]	○
Identical group No.706787 (3 seq.)
	>R05100046	AP008207	Plant	Oryza sativa Japonica Group	44403254	44403178	-	Cys	GCA	[RAP-DB]	○
	>R05100192	AP008208	Plant	Oryza sativa Japonica Group	36269374	36269298	-	Cys	GCA	[RAP-DB]	○
	>R05100372	AP008211	Plant	Oryza sativa Japonica Group	419842	419916	+	Cys	GCA	[RAP-DB]	○
Identical group No.706801 (2 seq.)
	>AD03000043	NC_003075	Plant	Arabidopsis thaliana	9978177	9978106	-	Cys	GCA	[TAIR]	○
	>AD03000059	NC_003076	Plant	Arabidopsis thaliana	7074015	7073942	-	Cys	GCA	[TAIR]	○
Identical group No.735130 (2 seq.)
	>AD01000127	NC_003070	Plant	Arabidopsis thaliana	19925911	19925838	-	Cys	GCA	[TAIR]	○
	>AD01000178	NC_003071	Plant	Arabidopsis thaliana	12329002	12329075	+	Cys	GCA	[TAIR]	○
Identical group No.735134 (2 seq.)
	>AD01000198	NC_003071	Plant	Arabidopsis thaliana	16518768	16518841	+	Cys	GCA	[TAIR]	○
	>AD01000210	NC_003071	Plant	Arabidopsis thaliana	16518636	16518563	-	Cys	GCA	[TAIR]	○
Identical group No.735140 (1 seq.)
	>AD01000250	NC_003074	Plant	Arabidopsis thaliana	4998140	4998214	+	Cys	GCA	[TAIR]	○
Identical group No.735145 (2 seq.)
	>R05100325	AP008210	Plant	Oryza sativa Japonica Group	28355678	28355752	+	Cys	GCA	[RAP-DB]	○
	>AD01000294	NC_003074	Plant	Arabidopsis thaliana	19409439	19409367	-	Cys	GCA	[TAIR]	○
Identical group No.741476 (1 seq.)
	>AD01000453	NC_003076	Plant	Arabidopsis thaliana	16507604	16507533	-	Cys	GCA	[TAIR]	○
Identical group No.741477 (1 seq.)
	>AD01000460	NC_003076	Plant	Arabidopsis thaliana	7074844	7074771	-	Cys	GCA	[TAIR]	○
Identical group No.741478 (1 seq.)
	>AD01000461	NC_003076	Plant	Arabidopsis thaliana	7073602	7073529	-	Cys	GCA	[TAIR]	○
Identical group No.745892 (2 seq.)
	>R05100206	AP008208	Plant	Oryza sativa Japonica Group	20467144	20467068	-	Cys	GCA	[RAP-DB]	○
	>R05100348	AP008210	Plant	Oryza sativa Japonica Group	20613274	20613200	-	Cys	GCA	[RAP-DB]	○
Identical group No.762166 (1 seq.)
	>R05100457	AP008213	Plant	Oryza sativa Japonica Group	3300319	3300395	+	Cys	GCA	[RAP-DB]	○
Identical group No.772288 (1 seq.)
	>AD01000118	NC_003070	Plant	Arabidopsis thaliana	23559259	23559186	-	Cys	GCA	[TAIR]	○
Identical group No.782068 (127 seq.)
	>WENV181241079	OFFE01061494	[OFFE] mouse gut metagenome; faeces		368	298	-	Cys	GCA	[ENA]	◯
	>WENV170659216	JXWR01001627	[JXWR] soil metagenome; rice field; ambient CO2		904	974	+	Cys	GCA	[ENA]	◯
	>WENV170659296	JXWR01003111	[JXWR] soil metagenome; rice field; ambient CO2		18426	18496	+	Cys	GCA	[ENA]	◯
	>CHL1810000268	AM777385	Viridiplantae	Lolium perenne (AM777385)	18086	18015	-	Cys	GCA	[ENA]	○
	>CHL1810001686	FJ466687	Viridiplantae	Festuca arundinacea (FJ466687)	18100	18029	-	Cys	GCA	[ENA]	○
	>CHL1810001990	FJ970915	Viridiplantae	Bambusa oldhamii (FJ970915)	20011	19941	-	Cys	GCA	[ENA]	○
	>CHL1810002019	FJ970916	Viridiplantae	Dendrocalamus latiflorus (FJ970916)	20173	20103	-	Cys	GCA	[ENA]	○
	>CHL1810003426	HQ154129	Viridiplantae	Phyllostachys nigra var. henonis (HQ154129)	20482	20412	-	Cys	GCA	[ENA]	○
	>CHL1810003791	HQ337793	Viridiplantae	Acidosasa purpurea (HQ337793)	20517	20447	-	Cys	GCA	[ENA]	○
	>CHL1810003820	HQ337796	Viridiplantae	Phyllostachys edulis (HQ337796)	20501	20431	-	Cys	GCA	[ENA]	○
	>CHL1810003849	HQ337797	Viridiplantae	Bambusa emeiensis (HQ337797)	20096	20026	-	Cys	GCA	[ENA]	○
	>CHL1810004480	JN005831	Viridiplantae	Oryza meridionalis (JN005831)	18130	18060	-	Cys	GCA	[ENA]	○
	>CHL1810004509	JN005832	Viridiplantae	Oryza rufipogon (JN005832)	18125	18055	-	Cys	GCA	[ENA]	○
	>CHL1810004677	JN032131	Viridiplantae	Pharus latifolius (JN032131)	20358	20288	-	Cys	GCA	[ENA]	○
	>CHL1810004870	JN415113	Viridiplantae	Phyllostachys propinqua (JN415113)	20490	20420	-	Cys	GCA	[ENA]	○
	>CHL1810005466	JQ740834	Viridiplantae	Aegilops speltoides (JQ740834)	18489	18419	-	Cys	GCA	[ENA]	○
	>CHL1810005515	JQ754651	Viridiplantae	Aegilops tauschii (JQ754651)	18528	18458	-	Cys	GCA	[ENA]	○
	>CHL1810005627	JX235347	Viridiplantae	Arundinaria gigantea (JX235347)	20470	20400	-	Cys	GCA	[ENA]	○
	>CHL1810006213	JX513413	Viridiplantae	Arundinaria fargesii (JX513413)	20482	20412	-	Cys	GCA	[ENA]	○
	>CHL1810006242	JX513414	Viridiplantae	Sarocalamus faberi (JX513414)	20486	20416	-	Cys	GCA	[ENA]	○
	>CHL1810006271	JX513415	Viridiplantae	Chimonocalamus longiusculus (JX513415)	20522	20452	-	Cys	GCA	[ENA]	○
	>CHL1810006300	JX513416	Viridiplantae	Fargesia nitida (JX513416)	20427	20357	-	Cys	GCA	[ENA]	○
	>CHL1810006329	JX513417	Viridiplantae	Fargesia spathacea (JX513417)	20561	20491	-	Cys	GCA	[ENA]	○
	>CHL1810006358	JX513418	Viridiplantae	Fargesia yunnanensis (JX513418)	20493	20423	-	Cys	GCA	[ENA]	○
	>CHL1810006387	JX513419	Viridiplantae	Gaoligongshania megalothyrsa (JX513419)	20659	20589	-	Cys	GCA	[ENA]	○
	>CHL1810006415	JX513420	Viridiplantae	Gelidocalamus tessellatus (JX513420)	20502	20432	-	Cys	GCA	[ENA]	○
	>CHL1810006444	JX513421	Viridiplantae	Indocalamus wilsonii (JX513421)	20623	20553	-	Cys	GCA	[ENA]	○
	>CHL1810006473	JX513422	Viridiplantae	Indosasa sinica (JX513422)	20524	20454	-	Cys	GCA	[ENA]	○
	>CHL1810006502	JX513423	Viridiplantae	Oligostachyum shiuyingianum (JX513423)	20513	20443	-	Cys	GCA	[ENA]	○
	>CHL1810006531	JX513424	Viridiplantae	Pleioblastus maculatus (JX513424)	20525	20455	-	Cys	GCA	[ENA]	○
	>CHL1810006560	JX513425	Viridiplantae	Thamnocalamus spathiflorus (JX513425)	20552	20482	-	Cys	GCA	[ENA]	○
	>CHL1810006589	JX513426	Viridiplantae	Yushania levigata (JX513426)	20482	20412	-	Cys	GCA	[ENA]	○
	>CHL1810008928	KC817462	Viridiplantae	Arundinaria appalachiana (KC817462)	20473	20403	-	Cys	GCA	[ENA]	○
	>CHL1810008957	KC817463	Viridiplantae	Arundinaria tecta (KC817463)	20463	20393	-	Cys	GCA	[ENA]	○
	>CHL1810009346	KC912690	Viridiplantae	Triticum monococcum (KC912690)	18486	18416	-	Cys	GCA	[ENA]	○
	>CHL1810009369	KC912691	Viridiplantae	Secale cereale (KC912691)	18510	18440	-	Cys	GCA	[ENA]	○
	>CHL1810009392	KC912693	Viridiplantae	Triticum urartu (KC912693)	18476	18406	-	Cys	GCA	[ENA]	○
	>CHL1810009943	KF359911	Viridiplantae	Oryza rhizomatis (KF359911)	18439	18369	-	Cys	GCA	[ENA]	○
	>CHL1810009972	KF359912	Viridiplantae	Oryza eichingeri (KF359912)	18441	18371	-	Cys	GCA	[ENA]	○
	>CHL1810010001	KF359913	Viridiplantae	Oryza alta (KF359913)	18443	18373	-	Cys	GCA	[ENA]	○
	>CHL1810010030	KF359914	Viridiplantae	Oryza grandiglumis (KF359914)	18420	18350	-	Cys	GCA	[ENA]	○
	>CHL1810010059	KF359915	Viridiplantae	Oryza latifolia (KF359915)	18418	18348	-	Cys	GCA	[ENA]	○
	>CHL1810010088	KF359918	Viridiplantae	Oryza longiglumis (KF359918)	19333	19263	-	Cys	GCA	[ENA]	○
	>CHL1810010117	KF359919	Viridiplantae	Oryza ridleyi (KF359919)	19327	19257	-	Cys	GCA	[ENA]	○
	>CHL1810010146	KF359921	Viridiplantae	Oryza meyeriana (KF359921)	19371	19301	-	Cys	GCA	[ENA]	○
	>CHL1810010420	KF534489	Viridiplantae	Aegilops cylindrica (KF534489)	18480	18410	-	Cys	GCA	[ENA]	○
	>CHL1810010443	KF534490	Viridiplantae	Aegilops geniculata (KF534490)	18462	18392	-	Cys	GCA	[ENA]	○
	>CHL1810012148	KJ614397	Viridiplantae	Triticum turgidum (KJ614397)	18362	18292	-	Cys	GCA	[ENA]	○
	>CHL1810012177	KJ614410	Viridiplantae	Triticum timopheevii (KJ614410)	18501	18431	-	Cys	GCA	[ENA]	○
	>CHL1810012206	KJ614414	Viridiplantae	Aegilops searsii (KJ614414)	18476	18406	-	Cys	GCA	[ENA]	○
	>CHL1810012235	KJ614416	Viridiplantae	Aegilops longissima (KJ614416)	18480	18410	-	Cys	GCA	[ENA]	○
	>CHL1810012264	KJ614418	Viridiplantae	Aegilops bicornis (KJ614418)	18483	18413	-	Cys	GCA	[ENA]	○
	>CHL1810012293	KJ614419	Viridiplantae	Aegilops sharonensis (KJ614419)	18483	18413	-	Cys	GCA	[ENA]	○
	>CHL1810012322	KJ614420	Viridiplantae	Aegilops kotschyi (KJ614420)	18483	18413	-	Cys	GCA	[ENA]	○
	>CHL1810012685	KJ722536	Viridiplantae	Bambusa multiplex (KJ722536)	20053	19983	-	Cys	GCA	[ENA]	○
	>CHL1810012714	KJ722540	Viridiplantae	Phyllostachys sulphurea (KJ722540)	20476	20406	-	Cys	GCA	[ENA]	○
	>CHL1810013285	KJ819549	Viridiplantae	Sartidia perrieri (KJ819549)	18607	18537	-	Cys	GCA	[ENA]	○
	>CHL1810013314	KJ819550	Viridiplantae	Sartidia dewinteri (KJ819550)	18245	18175	-	Cys	GCA	[ENA]	○
	>CHL1810013343	KJ830774	Viridiplantae	Oryza australiensis (KJ830774)	18331	18261	-	Cys	GCA	[ENA]	○
	>CHL1810014091	KM103369	Viridiplantae	Oryza sativa (KM103369)	18090	18020	-	Cys	GCA	[ENA]	○
	>CHL1810014120	KM103375	Viridiplantae	Oryza punctata (KM103375)	17950	17880	-	Cys	GCA	[ENA]	○
	>CHL1810014398	KM365071	Viridiplantae	Guadua angustifolia (KM365071)	20228	20158	-	Cys	GCA	[ENA]	○
	>CHL1810015943	KM881634	Viridiplantae	Oryza barthii (KM881634)	18151	18081	-	Cys	GCA	[ENA]	○
	>CHL1810015972	KM881640	Viridiplantae	Oryza glumipatula (KM881640)	18143	18073	-	Cys	GCA	[ENA]	○
	>CHL1810016001	KM881641	Viridiplantae	Oryza longistaminata (KM881641)	18120	18050	-	Cys	GCA	[ENA]	○
	>CHL1810016030	KM881643	Viridiplantae	Oryza officinalis (KM881643)	18214	18144	-	Cys	GCA	[ENA]	○
	>CHL1810016673	KP176438	Viridiplantae	Sporobolus maritimus (KP176438)	18759	18689	-	Cys	GCA	[ENA]	○
	>CHL1810018555	KR078265	Viridiplantae	Chikusichloa aquatica (KR078265)	19424	19354	-	Cys	GCA	[ENA]	○
	>CHL1810020964	KT373814	Viridiplantae	Guadua chacoensis (KT373814)	20570	20500	-	Cys	GCA	[ENA]	○
	>CHL1810021241	KT428377	Viridiplantae	Pseudosasa japonica (KT428377)	20150	20080	-	Cys	GCA	[ENA]	○
	>CHL1810021976	KT692644	Viridiplantae	Stipa lipskyi (KT692644)	110426	110356	-	Cys	GCA	[ENA]	○
	>CHL1810024009	KT983629	Viridiplantae	Stipa purpurea (KT983629)	18802	18732	-	Cys	GCA	[ENA]	○
	>CHL1810024066	KT992850	Viridiplantae	Oryza brachyantha (KT992850)	18600	18530	-	Cys	GCA	[ENA]	○
	>CHL1810024434	KU179220	Viridiplantae	Oryza minuta (KU179220)	18206	18136	-	Cys	GCA	[ENA]	○
	>CHL1810027149	KU666544	Viridiplantae	Streptochaeta spicata (KU666544)	21178	21108	-	Cys	GCA	[ENA]	○
	>CHL1810027178	KU666545	Viridiplantae	Leptaspis banksii (KU666545)	20174	20104	-	Cys	GCA	[ENA]	○
	>CHL1810027207	KU666546	Viridiplantae	Leptaspis zeylanica (KU666546)	20286	20216	-	Cys	GCA	[ENA]	○
	>CHL1810028551	KX035098	Viridiplantae	Joinvillea ascendens (KX035098)	45645	45715	+	Cys	GCA	[ENA]	○
	>CHL1810030921	KX109945	Viridiplantae	Arundo donax (KX109945)	19743	19673	-	Cys	GCA	[ENA]	○
	>CHL1810030950	KX109946	Viridiplantae	Arundo plinii (KX109946)	19762	19692	-	Cys	GCA	[ENA]	○
	>CHL1810033284	KX372537	Viridiplantae	Ampelocalamus naibunensis (KX372537)	20522	20452	-	Cys	GCA	[ENA]	○
	>CHL1810035189	KX756180	Viridiplantae	Avena sterilis (KX756180)	18082	18012	-	Cys	GCA	[ENA]	○
	>CHL1810037889	KX904877	Viridiplantae	Fargesia denudata (KX904877)	18743	18673	-	Cys	GCA	[ENA]	○
	>CHL1810041904	KY432778	Viridiplantae	Gastridium ventricosum (KY432778)	18175	18105	-	Cys	GCA	[ENA]	○
	>CHL1810041991	KY432781	Viridiplantae	Holcus lanatus (KY432781)	18161	18091	-	Cys	GCA	[ENA]	○
	>CHL1810042047	KY432783	Viridiplantae	Humbertochloa bambusiuscula (KY432783)	18929	18859	-	Cys	GCA	[ENA]	○
	>CHL1810042105	KY432785	Viridiplantae	Lygeum spartum (KY432785)	18943	18873	-	Cys	GCA	[ENA]	○
	>CHL1810042163	KY432787	Viridiplantae	Nardus stricta (KY432787)	18394	18324	-	Cys	GCA	[ENA]	○
	>CHL1810042192	KY432788	Viridiplantae	Nassella hyalina (KY432788)	19052	18982	-	Cys	GCA	[ENA]	○
	>CHL1810042250	KY432790	Viridiplantae	Phyllorachis sagittata (KY432790)	18630	18560	-	Cys	GCA	[ENA]	○
	>CHL1810042279	KY432791	Viridiplantae	Piptatherum songaricum (KY432791)	18397	18327	-	Cys	GCA	[ENA]	○
	>CHL1810042308	KY432792	Viridiplantae	Rhipidocladum pittieri (KY432792)	19940	19870	-	Cys	GCA	[ENA]	○
	>CHL1810042626	KY432804	Viridiplantae	Catapodium rigidum (KY432804)	16868	16798	-	Cys	GCA	[ENA]	○
	>CHL1810042684	KY432806	Viridiplantae	Cynosurus cristatus (KY432806)	16985	16915	-	Cys	GCA	[ENA]	○
	>CHL1810042742	KY432808	Viridiplantae	Ehrharta bulbosa (KY432808)	18455	18385	-	Cys	GCA	[ENA]	○
	>CHL1810042828	KY432812	Viridiplantae	Streptogyna americana (KY432812)	19638	19568	-	Cys	GCA	[ENA]	○
	>CHL1810046762	LC005978	Viridiplantae	Triticum macha (LC005978)	18406	18336	-	Cys	GCA	[ENA]	○
	>CHL1810049201	MF035969	Viridiplantae	Amphipogon caricinus (MF035969)	19699	19629	-	Cys	GCA	[ENA]	○
	>CHL1810049404	MF035979	Viridiplantae	Dregeochloa pumilla (MF035979)	19741	19671	-	Cys	GCA	[ENA]	○
	>CHL1810049491	MF035983	Viridiplantae	Eriachne mucronata (MF035983)	18531	18461	-	Cys	GCA	[ENA]	○
	>CHL1810049636	MF035994	Viridiplantae	Pheidochloa gracilis (MF035994)	18500	18430	-	Cys	GCA	[ENA]	○
	>CHL1810052599	MF460974	Viridiplantae	Taeniatherum caput-medusae (MF460974)	18451	18381	-	Cys	GCA	[ENA]	○
	>CHL1810052657	MF460976	Viridiplantae	Agrostis gigantea (MF460976)	18225	18155	-	Cys	GCA	[ENA]	○
	>CHL1810052686	MF460977	Viridiplantae	Alopecurus arundinaceus (MF460977)	18270	18200	-	Cys	GCA	[ENA]	○
	>CHL1810052715	MF460978	Viridiplantae	Aristida ternipes (MF460978)	18571	18501	-	Cys	GCA	[ENA]	○
	>CHL1810052744	MF460979	Viridiplantae	Connorochloa tenuis (MF460979)	18207	18137	-	Cys	GCA	[ENA]	○
	>CHL1810052802	MF460981	Viridiplantae	Drepanostachyum falcatum (MF460981)	20484	20414	-	Cys	GCA	[ENA]	○
	>CHL1810052831	MF460982	Viridiplantae	Lamarckia aurea (MF460982)	17913	17843	-	Cys	GCA	[ENA]	○
	>CHL1810052889	MF460984	Viridiplantae	Zingeria biebersteiniana (MF460984)	18157	18086	-	Cys	GCA	[ENA]	○
	>CHL1810053166	MF563365	Viridiplantae	Stipagrostis hirtigluma (MF563365)	18202	18132	-	Cys	GCA	[ENA]	○
	>CHL1810053311	MF563370	Viridiplantae	Sartidia isaloensis (MF563370)	18656	18586	-	Cys	GCA	[ENA]	○
	>CHL1810053688	MF563384	Viridiplantae	Aristida rufescens (MF563384)	17990	17920	-	Cys	GCA	[ENA]	○
	>CHL1810054108	MF614917	Viridiplantae	Littledalea racemosa (MF614917)	18731	18661	-	Cys	GCA	[ENA]	○
	>CHL1810057360	MG383937	Viridiplantae	Oryza coarctata (MG383937)	18354	18284	-	Cys	GCA	[ENA]	○
	>CHL1810057734	MG463107	Viridiplantae	Littledalea przevalskyi (MG463107)	18726	18656	-	Cys	GCA	[ENA]	○
	>CHL1810058149	MG570144	Viridiplantae	Littledalea alaica (MG570144)	18719	18649	-	Cys	GCA	[ENA]	○
	>R05100177	AP008208	Plant	Oryza sativa Japonica Group	15026426	15026499	+	Cys	GCA	[RAP-DB]	○
	>R05100353	AP008210	Plant	Oryza sativa Japonica Group	9420114	9420041	-	Cys	GCA	[RAP-DB]	○
	>R05100359	AP008210	Plant	Oryza sativa Japonica Group	9233212	9233139	-	Cys	GCA	[RAP-DB]	○
	>R05100606	AP008216	Plant	Oryza sativa Japonica Group	11223437	11223364	-	Cys	GCA	[RAP-DB]	○
	>CHL090100086	AB042240	Viridiplantae	Triticum aestivum	18751	18681	-	Cys	GCA	[ENA]	○
	>CHL090100920	AP006728	Viridiplantae	Oryza nivara	18064	17994	-	Cys	GCA	[ENA]	○
	>CHL090101481	AY522329	Viridiplantae	Oryza sativa Indica Group	18090	18020	-	Cys	GCA	[ENA]	○
	>CHL090101510	AY522331	Viridiplantae	Oryza sativa (japonica cultivar-group) isolate PA64S	18132	18062	-	Cys	GCA	[ENA]	○
	>CHL090102798	EF115541	Viridiplantae	Hordeum vulgare subsp. vulgare	18921	18851	-	Cys	GCA	[ENA]	○
	>CHL090102856	EF115543	Viridiplantae	Agrostis stolonifera	18706	18636	-	Cys	GCA	[ENA]	○
	>CHL090103259	X15901	Viridiplantae	Oryza sativa Japonica Group	18129	18059	-	Cys	GCA	[ENA]	○
Identical group No.816420 (1 seq.)
	>AD01000166	NC_003071	Plant	Arabidopsis thaliana	3495442	3495512	+	Cys	GCA	[TAIR]	○
Identical group No.821289 (1 seq.)
	>R05300052	AP008210	Plant	Oryza sativa Japonica Group	11303515	11303588	+	Cys	GCA	[RAP-DB]	○
Identical group No.834065 (1 seq.)
	>R05300086	AP008216	Plant	Oryza sativa Japonica Group	16779249	16779176	-	Cys	GCA	[RAP-DB]	○
Select	Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision

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