tRNA genes clustered and arranged according to each identical group

Anticodon = GCC

HIT: 13 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.691867 (3 seq.)
>WENV180889294 ODMN01026473 [ODMN] human metagenome; G_DNA_Supragingival plaque 708 781 + Gly GCC [ENA]
>WENV181446363 OGDT01001687 [OGDT] metagenome; Human gut stool 2627 2554 - Gly GCC [ENA]
>AD01000224 NC_003071 Plant Arabidopsis thaliana 3444434 3444361 - Gly GCC [TAIR]
Identical group No.782067 (98 seq.)
>WENV170659483 JXWR01006722 [JXWR] soil metagenome; rice field; ambient CO2 2569 2499 - Gly GCC [ENA]
>CHL1810000244 AM777385 Viridiplantae Lolium perenne (AM777385) 12282 12353 + Gly GCC [ENA]
>CHL1810001260 EU325680 Viridiplantae Brachypodium distachyon (EU325680) 12088 12159 + Gly GCC [ENA]
>CHL1810001670 FJ466687 Viridiplantae Festuca arundinacea (FJ466687) 12250 12321 + Gly GCC [ENA]
>CHL1810001970 FJ970915 Viridiplantae Bambusa oldhamii (FJ970915) 12459 12529 + Gly GCC [ENA]
>CHL1810001995 FJ970916 Viridiplantae Dendrocalamus latiflorus (FJ970916) 12490 12560 + Gly GCC [ENA]
>CHL1810003402 HQ154129 Viridiplantae Phyllostachys nigra var. henonis (HQ154129) 12924 12994 + Gly GCC [ENA]
>CHL1810003767 HQ337793 Viridiplantae Acidosasa purpurea (HQ337793) 12941 13011 + Gly GCC [ENA]
>CHL1810003796 HQ337796 Viridiplantae Phyllostachys edulis (HQ337796) 12931 13001 + Gly GCC [ENA]
>CHL1810003825 HQ337797 Viridiplantae Bambusa emeiensis (HQ337797) 12478 12548 + Gly GCC [ENA]
>CHL1810004456 JN005831 Viridiplantae Oryza meridionalis (JN005831) 12336 12406 + Gly GCC [ENA]
>CHL1810004485 JN005832 Viridiplantae Oryza rufipogon (JN005832) 12334 12404 + Gly GCC [ENA]
>CHL1810004847 JN415113 Viridiplantae Phyllostachys propinqua (JN415113) 12925 12995 + Gly GCC [ENA]
>CHL1810005603 JX235347 Viridiplantae Arundinaria gigantea (JX235347) 12919 12989 + Gly GCC [ENA]
>CHL1810006189 JX513413 Viridiplantae Arundinaria fargesii (JX513413) 12925 12995 + Gly GCC [ENA]
>CHL1810006218 JX513414 Viridiplantae Sarocalamus faberi (JX513414) 12926 12996 + Gly GCC [ENA]
>CHL1810006247 JX513415 Viridiplantae Chimonocalamus longiusculus (JX513415) 12947 13017 + Gly GCC [ENA]
>CHL1810006276 JX513416 Viridiplantae Fargesia nitida (JX513416) 12865 12935 + Gly GCC [ENA]
>CHL1810006305 JX513417 Viridiplantae Fargesia spathacea (JX513417) 12924 12994 + Gly GCC [ENA]
>CHL1810006334 JX513418 Viridiplantae Fargesia yunnanensis (JX513418) 12925 12995 + Gly GCC [ENA]
>CHL1810006392 JX513420 Viridiplantae Gelidocalamus tessellatus (JX513420) 12939 13009 + Gly GCC [ENA]
>CHL1810006420 JX513421 Viridiplantae Indocalamus wilsonii (JX513421) 12977 13047 + Gly GCC [ENA]
>CHL1810006449 JX513422 Viridiplantae Indosasa sinica (JX513422) 12941 13011 + Gly GCC [ENA]
>CHL1810006478 JX513423 Viridiplantae Oligostachyum shiuyingianum (JX513423) 12936 13006 + Gly GCC [ENA]
>CHL1810006507 JX513424 Viridiplantae Pleioblastus maculatus (JX513424) 12950 13020 + Gly GCC [ENA]
>CHL1810006536 JX513425 Viridiplantae Thamnocalamus spathiflorus (JX513425) 12941 13011 + Gly GCC [ENA]
>CHL1810006565 JX513426 Viridiplantae Yushania levigata (JX513426) 12926 12996 + Gly GCC [ENA]
>CHL1810008429 KC534841 Viridiplantae Puelia olyriformis (KC534841) 12940 13010 + Gly GCC [ENA]
>CHL1810008904 KC817462 Viridiplantae Arundinaria appalachiana (KC817462) 12923 12993 + Gly GCC [ENA]
>CHL1810008933 KC817463 Viridiplantae Arundinaria tecta (KC817463) 12914 12984 + Gly GCC [ENA]
>CHL1810009919 KF359911 Viridiplantae Oryza rhizomatis (KF359911) 12420 12490 + Gly GCC [ENA]
>CHL1810009948 KF359912 Viridiplantae Oryza eichingeri (KF359912) 12419 12489 + Gly GCC [ENA]
>CHL1810009977 KF359913 Viridiplantae Oryza alta (KF359913) 12419 12489 + Gly GCC [ENA]
>CHL1810010006 KF359914 Viridiplantae Oryza grandiglumis (KF359914) 12420 12490 + Gly GCC [ENA]
>CHL1810010035 KF359915 Viridiplantae Oryza latifolia (KF359915) 12416 12486 + Gly GCC [ENA]
>CHL1810010064 KF359918 Viridiplantae Oryza longiglumis (KF359918) 12357 12427 + Gly GCC [ENA]
>CHL1810010093 KF359919 Viridiplantae Oryza ridleyi (KF359919) 12357 12427 + Gly GCC [ENA]
>CHL1810010122 KF359921 Viridiplantae Oryza meyeriana (KF359921) 12350 12420 + Gly GCC [ENA]
>CHL1810010151 KF359922 Viridiplantae Leersia japonica (KF359922) 11904 11974 + Gly GCC [ENA]
>CHL1810010589 KF730315 Viridiplantae Phragmites australis (KF730315) 12791 12861 + Gly GCC [ENA]
>CHL1810012661 KJ722536 Viridiplantae Bambusa multiplex (KJ722536) 12463 12533 + Gly GCC [ENA]
>CHL1810012690 KJ722540 Viridiplantae Phyllostachys sulphurea (KJ722540) 12919 12989 + Gly GCC [ENA]
>CHL1810013319 KJ830774 Viridiplantae Oryza australiensis (KJ830774) 12352 12422 + Gly GCC [ENA]
>CHL1810014067 KM103369 Viridiplantae Oryza sativa (KM103369) 12270 12340 + Gly GCC [ENA]
>CHL1810014096 KM103375 Viridiplantae Oryza punctata (KM103375) 11917 11987 + Gly GCC [ENA]
>CHL1810015919 KM881634 Viridiplantae Oryza barthii (KM881634) 12341 12411 + Gly GCC [ENA]
>CHL1810015948 KM881640 Viridiplantae Oryza glumipatula (KM881640) 12328 12398 + Gly GCC [ENA]
>CHL1810015977 KM881641 Viridiplantae Oryza longistaminata (KM881641) 12328 12398 + Gly GCC [ENA]
>CHL1810016006 KM881643 Viridiplantae Oryza officinalis (KM881643) 12420 12490 + Gly GCC [ENA]
>CHL1810019808 KT161956 Viridiplantae Zizania latifolia (KT161956) 12071 12141 + Gly GCC [ENA]
>CHL1810021217 KT428377 Viridiplantae Pseudosasa japonica (KT428377) 12504 12574 + Gly GCC [ENA]
>CHL1810021970 KT692644 Viridiplantae Stipa lipskyi (KT692644) 103410 103481 + Gly GCC [ENA]
>CHL1810023985 KT983629 Viridiplantae Stipa purpurea (KT983629) 12225 12296 + Gly GCC [ENA]
>CHL1810024042 KT992850 Viridiplantae Oryza brachyantha (KT992850) 12231 12301 + Gly GCC [ENA]
>CHL1810024410 KU179220 Viridiplantae Oryza minuta (KU179220) 12217 12287 + Gly GCC [ENA]
>CHL1810030897 KX109945 Viridiplantae Arundo donax (KX109945) 12622 12692 + Gly GCC [ENA]
>CHL1810030926 KX109946 Viridiplantae Arundo plinii (KX109946) 12632 12702 + Gly GCC [ENA]
>CHL1810033260 KX372537 Viridiplantae Ampelocalamus naibunensis (KX372537) 12950 13020 + Gly GCC [ENA]
>CHL1810035165 KX756180 Viridiplantae Avena sterilis (KX756180) 12172 12244 + Gly GCC [ENA]
>CHL1810037866 KX904877 Viridiplantae Fargesia denudata (KX904877) 11973 12043 + Gly GCC [ENA]
>CHL1810041880 KY432778 Viridiplantae Gastridium ventricosum (KY432778) 12143 12215 + Gly GCC [ENA]
>CHL1810041967 KY432781 Viridiplantae Holcus lanatus (KY432781) 12151 12222 + Gly GCC [ENA]
>CHL1810042081 KY432785 Viridiplantae Lygeum spartum (KY432785) 12117 12187 + Gly GCC [ENA]
>CHL1810042168 KY432788 Viridiplantae Nassella hyalina (KY432788) 12121 12192 + Gly GCC [ENA]
>CHL1810042313 KY432793 Viridiplantae Rytidosperma semiannulare (KY432793) 11851 11921 + Gly GCC [ENA]
>CHL1810042370 KY432795 Viridiplantae Schismus arabicus (KY432795) 12066 12136 + Gly GCC [ENA]
>CHL1810042428 KY432798 Viridiplantae Tribolium hispidum (KY432798) 12052 12122 + Gly GCC [ENA]
>CHL1810042602 KY432804 Viridiplantae Catapodium rigidum (KY432804) 11783 11854 + Gly GCC [ENA]
>CHL1810042660 KY432806 Viridiplantae Cynosurus cristatus (KY432806) 11955 12026 + Gly GCC [ENA]
>CHL1810049177 MF035969 Viridiplantae Amphipogon caricinus (MF035969) 12472 12542 + Gly GCC [ENA]
>CHL1810049206 MF035970 Viridiplantae Amphipogon turbinatus (MF035970) 12149 12219 + Gly GCC [ENA]
>CHL1810049293 MF035975 Viridiplantae Crinipes abyssinicus (MF035975) 12886 12956 + Gly GCC [ENA]
>CHL1810049322 MF035976 Viridiplantae Crinipes longifolius (MF035976) 12875 12945 + Gly GCC [ENA]
>CHL1810049380 MF035979 Viridiplantae Dregeochloa pumilla (MF035979) 12661 12731 + Gly GCC [ENA]
>CHL1810049583 MF035993 Viridiplantae Phaenanthoecium koestlinii (MF035993) 12266 12337 + Gly GCC [ENA]
>CHL1810049641 MF035997 Viridiplantae Styppeiochloa gynoglossa (MF035997) 12908 12978 + Gly GCC [ENA]
>CHL1810052546 MF460972 Viridiplantae Prosphytochloa prehensilis (MF460972) 12336 12406 + Gly GCC [ENA]
>CHL1810052633 MF460976 Viridiplantae Agrostis gigantea (MF460976) 12167 12239 + Gly GCC [ENA]
>CHL1810052720 MF460979 Viridiplantae Connorochloa tenuis (MF460979) 12094 12165 + Gly GCC [ENA]
>CHL1810052749 MF460980 Viridiplantae Rytidosperma pallidum (MF460980) 12275 12345 + Gly GCC [ENA]
>CHL1810052778 MF460981 Viridiplantae Drepanostachyum falcatum (MF460981) 12921 12991 + Gly GCC [ENA]
>CHL1810052807 MF460982 Viridiplantae Lamarckia aurea (MF460982) 12153 12224 + Gly GCC [ENA]
>CHL1810052865 MF460984 Viridiplantae Zingeria biebersteiniana (MF460984) 12181 12252 + Gly GCC [ENA]
>CHL1810053432 MF563375 Viridiplantae Merxmuellera tsaratananensis (MF563375) 12529 12599 + Gly GCC [ENA]
>CHL1810054084 MF614917 Viridiplantae Littledalea racemosa (MF614917) 12117 12188 + Gly GCC [ENA]
>CHL1810057336 MG383937 Viridiplantae Oryza coarctata (MG383937) 12556 12626 + Gly GCC [ENA]
>CHL1810057710 MG463107 Viridiplantae Littledalea przevalskyi (MG463107) 12105 12176 + Gly GCC [ENA]
>CHL1810058125 MG570144 Viridiplantae Littledalea alaica (MG570144) 12105 12176 + Gly GCC [ENA]
>R05100029 AP008207 Plant Oryza sativa Japonica Group 35300771 35300844 + Gly GCC [RAP-DB]
>R05100297 AP008210 Plant Oryza sativa Japonica Group 9227394 9227467 + Gly GCC [RAP-DB]
>R05100303 AP008210 Plant Oryza sativa Japonica Group 9414296 9414369 + Gly GCC [RAP-DB]
>R05100565 AP008216 Plant Oryza sativa Japonica Group 11217613 11217686 + Gly GCC [RAP-DB]
>CHL090100896 AP006728 Viridiplantae Oryza nivara 12273 12343 + Gly GCC [ENA]
>CHL090101457 AY522329 Viridiplantae Oryza sativa Indica Group 12270 12340 + Gly GCC [ENA]
>CHL090101486 AY522331 Viridiplantae Oryza sativa (japonica cultivar-group) isolate PA64S 12333 12403 + Gly GCC [ENA]
>CHL090102775 EF115541 Viridiplantae Hordeum vulgare subsp. vulgare 12647 12718 + Gly GCC [ENA]
>CHL090102833 EF115543 Viridiplantae Agrostis stolonifera 12710 12782 + Gly GCC [ENA]
>CHL090103235 X15901 Viridiplantae Oryza sativa Japonica Group 12331 12401 + Gly GCC [ENA]
Identical group No.782142 (33 seq.)
>WENV180541325 OCHR01097994 [OCHR] human gut metagenome; human gut 267 195 - Gly GCC [ENA]
>WENV170659823 JXWR01148052 [JXWR] soil metagenome; rice field; ambient CO2 2 72 + Gly GCC [ENA]
>R05100017 AP008207 Plant Oryza sativa Japonica Group 26004251 26004324 + Gly GCC [RAP-DB]
>R05100208 AP008208 Plant Oryza sativa Japonica Group 16411447 16411374 - Gly GCC [RAP-DB]
>R05100223 AP008208 Plant Oryza sativa Japonica Group 6184849 6184776 - Gly GCC [RAP-DB]
>R05100229 AP008209 Plant Oryza sativa Japonica Group 2138384 2138457 + Gly GCC [RAP-DB]
>R05100233 AP008209 Plant Oryza sativa Japonica Group 10439334 10439407 + Gly GCC [RAP-DB]
>R05100245 AP008209 Plant Oryza sativa Japonica Group 26430118 26430191 + Gly GCC [RAP-DB]
>R05100253 AP008209 Plant Oryza sativa Japonica Group 33867732 33867805 + Gly GCC [RAP-DB]
>R05100284 AP008209 Plant Oryza sativa Japonica Group 2606689 2606616 - Gly GCC [RAP-DB]
>R05100338 AP008210 Plant Oryza sativa Japonica Group 26072301 26072228 - Gly GCC [RAP-DB]
>R05100384 AP008211 Plant Oryza sativa Japonica Group 24303211 24303284 + Gly GCC [RAP-DB]
>R05100396 AP008211 Plant Oryza sativa Japonica Group 29659773 29659700 - Gly GCC [RAP-DB]
>R05100418 AP008211 Plant Oryza sativa Japonica Group 4884007 4883934 - Gly GCC [RAP-DB]
>R05100426 AP008212 Plant Oryza sativa Japonica Group 2364637 2364710 + Gly GCC [RAP-DB]
>R05100441 AP008212 Plant Oryza sativa Japonica Group 24061359 24061286 - Gly GCC [RAP-DB]
>R05100459 AP008213 Plant Oryza sativa Japonica Group 3692188 3692261 + Gly GCC [RAP-DB]
>R05100523 AP008214 Plant Oryza sativa Japonica Group 19325281 19325208 - Gly GCC [RAP-DB]
>R05100585 AP008216 Plant Oryza sativa Japonica Group 23358198 23358271 + Gly GCC [RAP-DB]
>AD01000122 NC_003070 Plant Arabidopsis thaliana 22394707 22394637 - Gly GCC [TAIR]
>AD01000123 NC_003070 Plant Arabidopsis thaliana 22313484 22313414 - Gly GCC [TAIR]
>AD01000151 NC_003070 Plant Arabidopsis thaliana 2111218 2111148 - Gly GCC [TAIR]
>AD01000152 NC_003070 Plant Arabidopsis thaliana 2107468 2107398 - Gly GCC [TAIR]
>AD01000179 NC_003071 Plant Arabidopsis thaliana 12881591 12881662 + Gly GCC [TAIR]
>AD01000180 NC_003071 Plant Arabidopsis thaliana 12882734 12882804 + Gly GCC [TAIR]
>AD01000213 NC_003071 Plant Arabidopsis thaliana 12976018 12975948 - Gly GCC [TAIR]
>AD01000276 NC_003074 Plant Arabidopsis thaliana 19984941 19985011 + Gly GCC [TAIR]
>AD01000278 NC_003074 Plant Arabidopsis thaliana 21542282 21542352 + Gly GCC [TAIR]
>AD01000282 NC_003074 Plant Arabidopsis thaliana 22842522 22842592 + Gly GCC [TAIR]
>AD01000342 NC_003075 Plant Arabidopsis thaliana 15671393 15671463 + Gly GCC [TAIR]
>AD01000400 NC_003076 Plant Arabidopsis thaliana 6401239 6401309 + Gly GCC [TAIR]
>AD01000435 NC_003076 Plant Arabidopsis thaliana 26682778 26682708 - Gly GCC [TAIR]
>AD01000471 NC_003076 Plant Arabidopsis thaliana 2212748 2212678 - Gly GCC [TAIR]
Identical group No.816421 (2 seq.)
>AD01000086 NC_003070 Plant Arabidopsis thaliana 22428167 22428237 + Gly GCC [TAIR]
>AD01000199 NC_003071 Plant Arabidopsis thaliana 17660778 17660848 + Gly GCC [TAIR]
Identical group No.816422 (1 seq.)
>AD01000312 NC_003074 Plant Arabidopsis thaliana 1843394 1843324 - Gly GCC [TAIR]
Identical group No.819386 (2 seq.)
>AD01000094 NC_003070 Plant Arabidopsis thaliana 26973389 26973459 + Gly GCC [TAIR]
>AD01000452 NC_003076 Plant Arabidopsis thaliana 17495611 17495540 - Gly GCC [TAIR]
Identical group No.819387 (1 seq.)
>AD01000479 NC_003076 Plant Arabidopsis thaliana 389963 389893 - Gly GCC [TAIR]
Identical group No.821288 (1 seq.)
>R05100156 AP008218 Plant Oryza sativa Japonica Group 19445679 19445606 - Gly GCC [RAP-DB]
Identical group No.828724 (1 seq.)
>R05100460 AP008213 Plant Oryza sativa Japonica Group 3697977 3698050 + Gly GCC [RAP-DB]
Identical group No.828725 (1 seq.)
>R05100472 AP008213 Plant Oryza sativa Japonica Group 30135856 30135783 - Gly GCC [RAP-DB]
Identical group No.834066 (1 seq.)
>AD01000121 NC_003070 Plant Arabidopsis thaliana 22397662 22397592 - Gly GCC [TAIR]
Identical group No.835769 (1 seq.)
>R05100199 AP008208 Plant Oryza sativa Japonica Group 25544723 25544650 - Gly GCC [RAP-DB]
Identical group No.835770 (1 seq.)
>R05100209 AP008208 Plant Oryza sativa Japonica Group 15032200 15032127 - Gly GCC [RAP-DB]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

BACK