tRNA genes clustered and arranged according to each identical group

Anticodon = GCT

HIT: 14 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.9311 (1 seq.)
>R05100102 AP008217 Plant Oryza sativa Japonica Group 25871931 25871838 - Ser GCT [RAP-DB]
Identical group No.12665 (15 seq.)
>R05100180 AP008208 Plant Oryza sativa Japonica Group 15036617 15036709 + Ser GCT [RAP-DB]
>R05100189 AP008208 Plant Oryza sativa Japonica Group 29930167 29930259 + Ser GCT [RAP-DB]
>R05100356 AP008210 Plant Oryza sativa Japonica Group 9409947 9409855 - Ser GCT [RAP-DB]
>R05100362 AP008210 Plant Oryza sativa Japonica Group 9223041 9222949 - Ser GCT [RAP-DB]
>R05100583 AP008216 Plant Oryza sativa Japonica Group 22945348 22945440 + Ser GCT [RAP-DB]
>R05100609 AP008216 Plant Oryza sativa Japonica Group 11213267 11213175 - Ser GCT [RAP-DB]
>CHL090100233 AE009947 Viridiplantae Saccharum hybrid cultivar SP-80-3280 70074 69982 - Ser GCT [ENA]
>CHL090100860 AP006714 Viridiplantae Saccharum officinarum 8448 8356 - Ser GCT [ENA]
>CHL090100923 AP006728 Viridiplantae Oryza nivara 7921 7829 - Ser GCT [ENA]
>CHL090101484 AY522329 Viridiplantae Oryza sativa Indica Group 7923 7831 - Ser GCT [ENA]
>CHL090101513 AY522331 Viridiplantae Oryza sativa (japonica cultivar-group) isolate PA64S 7917 7825 - Ser GCT [ENA]
>CHL090101707 AY928077 Viridiplantae Zea mays cultivar B73 8094 8002 - Ser GCT [ENA]
>CHL090102830 EF115542 Viridiplantae Sorghum bicolor 8944 8852 - Ser GCT [ENA]
>CHL090103262 X15901 Viridiplantae Oryza sativa Japonica Group 7916 7824 - Ser GCT [ENA]
>CHL090103320 X86563 Viridiplantae Zea mays 8099 8007 - Ser GCT [ENA]
Identical group No.31854 (8 seq.)
>WENV181574728 OGJT01007231 [OGJT] metagenome; Human gut stool 89 179 + Ser GCT [ENA]
>WENV181597778 OGKZ01023539 [OGKZ] metagenome; Human gut stool 426 336 - Ser GCT [ENA]
>WENV181609439 OGLN01032556 [OGLN] metagenome; Human gut stool 425 335 - Ser GCT [ENA]
>WENV181634926 OGMW01048311 [OGMW] metagenome; Human gut stool 287 377 + Ser GCT [ENA]
>WENV181981965 OHAG01012350 [OHAG] human gut metagenome; faeces 1339 1249 - Ser GCT [ENA]
>WENV182642184 OJLL01004272 [OJLL] metagenome; surface 1348 1438 + Ser GCT [ENA]
>WENV170659087 JXWR01000009 [JXWR] soil metagenome; rice field; ambient CO2 32682 32773 + Ser GCT [ENA]
>R05100127 AP008218 Plant Oryza sativa Japonica Group 20613271 20613363 + Ser GCT [RAP-DB]
Identical group No.40764 (4 seq.)
>WENV180881090 ODLZ01150888 [ODLZ] human metagenome; G_DNA_Tongue dorsum 109 19 - Ser GCT [ENA]
>WENV182640138 OJLB01000438 [OJLB] metagenome; surface 5834 5744 - Ser GCT [ENA]
>AD01000164 NC_003071 Plant Arabidopsis thaliana 3494381 3494471 + Ser GCT [TAIR]
>AD01000226 NC_003071 Plant Arabidopsis thaliana 3303823 3303733 - Ser GCT [TAIR]
Identical group No.45271 (1 seq.)
>R05100531 AP008215 Plant Oryza sativa Japonica Group 5315502 5315594 + Ser GCT [RAP-DB]
Identical group No.181955 (10 seq.)
>WENV170659702 JXWR01035174 [JXWR] soil metagenome; rice field; ambient CO2 404 487 + Ser GCT [ENA]
>R05100096 AP008217 Plant Oryza sativa Japonica Group 26396882 26396968 + Ser GCT [RAP-DB]
>R05100171 AP008208 Plant Oryza sativa Japonica Group 1079702 1079788 + Ser GCT [RAP-DB]
>R05100227 AP008208 Plant Oryza sativa Japonica Group 1480638 1480552 - Ser GCT [RAP-DB]
>R05100449 AP008212 Plant Oryza sativa Japonica Group 5428152 5428066 - Ser GCT [RAP-DB]
>R05100452 AP008212 Plant Oryza sativa Japonica Group 166313 166227 - Ser GCT [RAP-DB]
>R05100463 AP008213 Plant Oryza sativa Japonica Group 13978480 13978566 + Ser GCT [RAP-DB]
>R05100467 AP008213 Plant Oryza sativa Japonica Group 25883344 25883430 + Ser GCT [RAP-DB]
>R05100468 AP008213 Plant Oryza sativa Japonica Group 25885551 25885637 + Ser GCT [RAP-DB]
>R05100520 AP008214 Plant Oryza sativa Japonica Group 22882762 22882676 - Ser GCT [RAP-DB]
Identical group No.196785 (2 seq.)
>AD01000109 NC_003070 Plant Arabidopsis thaliana 29002286 29002205 - Ser GCT [TAIR]
>AD01000334 NC_003075 Plant Arabidopsis thaliana 12686139 12686220 + Ser GCT [TAIR]
Identical group No.196786 (3 seq.)
>AD01000206 NC_003071 Plant Arabidopsis thaliana 18310058 18309977 - Ser GCT [TAIR]
>AD01000337 NC_003075 Plant Arabidopsis thaliana 14267281 14267362 + Ser GCT [TAIR]
>AD01000466 NC_003076 Plant Arabidopsis thaliana 3287634 3287553 - Ser GCT [TAIR]
Identical group No.205484 (2 seq.)
>AD01000208 NC_003071 Plant Arabidopsis thaliana 17538785 17538702 - Ser GCT [TAIR]
>AD01000472 NC_003076 Plant Arabidopsis thaliana 2060235 2060152 - Ser GCT [TAIR]
Identical group No.205486 (1 seq.)
>AD01000277 NC_003074 Plant Arabidopsis thaliana 21487317 21487398 + Ser GCT [TAIR]
Identical group No.205487 (1 seq.)
>AD01000291 NC_003074 Plant Arabidopsis thaliana 22186916 22186835 - Ser GCT [TAIR]
Identical group No.205488 (1 seq.)
>AD01000302 NC_003074 Plant Arabidopsis thaliana 7319658 7319577 - Ser GCT [TAIR]
Identical group No.207306 (1 seq.)
>AD01000439 NC_003076 Plant Arabidopsis thaliana 26157270 26157189 - Ser GCT [TAIR]
Identical group No.213543 (1 seq.)
>R05100477 AP008213 Plant Oryza sativa Japonica Group 25884595 25884511 - Ser GCT [RAP-DB]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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