tRNA genes clustered and arranged according to each identical group

Anticodon = AAG

HIT: 4 Group(s).
Download Sequence Representative sequence of each cluster
View ClustalW result
Sort by Identical group No. Sort by the number of tRNAs in the Identical group
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Identical group No.87609 (142 seq.)
>W1710782879 LJFJ01000004 Firmicutes Lactobacillus fermentum (LJFJ) 386611 386524 - Leu AAG [ENA]
>W1710782900 LJFJ01000006 Firmicutes Lactobacillus fermentum (LJFJ) 91803 91890 + Leu AAG [ENA]
>W1710801584 LJWZ01000032 Firmicutes Lactobacillus fermentum (LJWZ) 100337 100250 - Leu AAG [ENA]
>W1710801591 LJWZ01000073 Firmicutes Lactobacillus fermentum (LJWZ) 4543 4456 - Leu AAG [ENA]
>W1711185538 LWNM01000066 Firmicutes Lactobacillus sp. HMSC24D01 (LWNM) 2017 2104 + Leu AAG [ENA]
>W1711185554 LWNM01000112 Firmicutes Lactobacillus sp. HMSC24D01 (LWNM) 64341 64254 - Leu AAG [ENA]
>W1711487614 MKGE01000011 Firmicutes Lactobacillus fermentum (MKGE) 13520 13607 + Leu AAG [ENA]
>W1711487635 MKGE01000045 Firmicutes Lactobacillus fermentum (MKGE) 10179 10266 + Leu AAG [ENA]
>W1712106889 NIWV01000002 Firmicutes Lactobacillus fermentum (NIWV) 3663 3750 + Leu AAG [ENA]
>W1712106925 NIWV01000020 Firmicutes Lactobacillus fermentum (NIWV) 21485 21398 - Leu AAG [ENA]
>C171057893 CP017151 Firmicutes Lactobacillus fermentum NCC2970 (CP017151) 1195069 1195156 + Leu AAG -
>C171088285 CP019030 Firmicutes Lactobacillus fermentum SNUV175 (CP019030) 1985913 1985826 - Leu AAG -
>C171088296 CP019030 Firmicutes Lactobacillus fermentum SNUV175 (CP019030) 718562 718475 - Leu AAG -
>C171115619 CP021104 Firmicutes Lactobacillus fermentum FTDC 8312 (CP021104) 327253 327340 + Leu AAG -
>C171115643 CP021104 Firmicutes Lactobacillus fermentum FTDC 8312 (CP021104) 1226062 1226149 + Leu AAG -
>C171123264 CP021790 Firmicutes Lactobacillus fermentum LAC FRN-92 (CP021790) 511801 511888 + Leu AAG -
>C171123285 CP021790 Firmicutes Lactobacillus fermentum LAC FRN-92 (CP021790) 1915632 1915719 + Leu AAG -
>C171123291 CP021790 Firmicutes Lactobacillus fermentum LAC FRN-92 (CP021790) 2058948 2058861 - Leu AAG -
>WENV180334144 OBLF01005635 [OBLF] metagenome; feces 2561 2646 + Leu AAG [ENA]
>WENV180410620 OBUX01000553 [OBUX] human gut metagenome; faeces 10265 10350 + Leu AAG [ENA]
>WENV180442327 OBWW01042425 [OBWW] human gut metagenome; faeces 12 97 + Leu AAG [ENA]
>W141092471 AVAB01000001 Firmicutes Lactobacillus fermentum MTCC 8711 [AVAB] 313972 314059 + Leu AAG [ENA]
>W141094654 AVCT01000225 Firmicutes Lactobacillus fermentum 3872 [AVCT] 9945 9858 - Leu AAG [ENA]
>W141094657 AVCT01000231 Firmicutes Lactobacillus fermentum 3872 [AVCT] 356 269 - Leu AAG [ENA]
>WENV181458399 OGEJ01013784 [OGEJ] metagenome; Human gut stool 669 754 + Leu AAG [ENA]
>WENV181469091 OGES01051600 [OGES] metagenome; Human gut stool 197 282 + Leu AAG [ENA]
>WENV181473738 OGFC01000144 [OGFC] metagenome; Human gut stool 13661 13746 + Leu AAG [ENA]
>WENV181474196 OGFC01002986 [OGFC] metagenome; Human gut stool 2223 2308 + Leu AAG [ENA]
>W141148179 AWXS01000040 Firmicutes Lactobacillus fermentum Lf1 [AWXS] 10108 10195 + Leu AAG [ENA]
>W141148204 AWXS01000131 Firmicutes Lactobacillus fermentum Lf1 [AWXS] 1684 1771 + Leu AAG [ENA]
>WENV181505966 OGGM01000012 [OGGM] metagenome; Human gut stool 181374 181289 - Leu AAG [ENA]
>WENV181506402 OGGM01001664 [OGGM] metagenome; Human gut stool 4373 4288 - Leu AAG [ENA]
>WENV181519119 OGHB01006862 [OGHB] metagenome; Human gut stool 1425 1510 + Leu AAG [ENA]
>WENV181553182 OGIQ01005815 [OGIQ] metagenome; Human gut stool 2366 2281 - Leu AAG [ENA]
>WENV181555763 OGIU01000158 [OGIU] metagenome; Human gut stool 26820 26735 - Leu AAG [ENA]
>WENV181564623 OGJH01014072 [OGJH] metagenome; Human gut stool 901 816 - Leu AAG [ENA]
>WENV181573643 OGJR01032162 [OGJR] metagenome; Human gut stool 29 114 + Leu AAG [ENA]
>WENV181588087 OGKH01000570 [OGKH] metagenome; Human gut stool 19839 19754 - Leu AAG [ENA]
>WENV181588212 OGKH01001629 [OGKH] metagenome; Human gut stool 4442 4357 - Leu AAG [ENA]
>WENV181590057 OGKM01003149 [OGKM] metagenome; Human gut stool 2959 3044 + Leu AAG [ENA]
>WENV182404081 OIEU01002414 [OIEU] human gut metagenome; human gut 4417 4502 + Leu AAG [ENA]
>WENV182404198 OIEU01005006 [OIEU] human gut metagenome; human gut 1390 1305 - Leu AAG [ENA]
>C08006041 AP008937 Firmicutes Lactobacillus fermentum IFO 3956 313718 313805 + Leu AAG [Ensembl]
>C08006065 AP008937 Firmicutes Lactobacillus fermentum IFO 3956 1167384 1167471 + Leu AAG [Ensembl]
>WENV183182557 OLPK01000489 [OLPK] human gut metagenome; faeces 33488 33403 - Leu AAG [ENA]
>WENV183217438 OLQI01000320 [OLQI] human gut metagenome; faeces 25673 25588 - Leu AAG [ENA]
>WENV183217559 OLQI01000658 [OLQI] human gut metagenome; faeces 19512 19427 - Leu AAG [ENA]
>WENV183307269 OLTD01010208 [OLTD] human gut metagenome; faeces 444 529 + Leu AAG [ENA]
>PL191001235 CP033373 Firmicutes Lactobacillus fermentum DR9 plasmid:unnamed2 (CP033373) 186049 186134 + Leu AAG [ENA]
>C181004014 AP017973 Firmicutes Lactobacillus fermentum MTCC 25067 (AP017973) 306619 306704 + Leu AAG -
>C181004038 AP017973 Firmicutes Lactobacillus fermentum MTCC 25067 (AP017973) 1055222 1055307 + Leu AAG -
>C181054745 CP021964 Firmicutes Lactobacillus fermentum CBA7106 (CP021964) 300030 300115 + Leu AAG -
>C181054769 CP021964 Firmicutes Lactobacillus fermentum CBA7106 (CP021964) 1069512 1069597 + Leu AAG -
>C181196707 CP031195 Firmicutes Lactobacillus fermentum LDTM 7301 (CP031195) 602429 602514 + Leu AAG -
>C181196718 CP031195 Firmicutes Lactobacillus fermentum LDTM 7301 (CP031195) 1847182 1847267 + Leu AAG -
>C181226918 LT906621 Firmicutes Lactobacillus fermentum IMDO 130101 (LT906621) 315800 315885 + Leu AAG -
>C181226942 LT906621 Firmicutes Lactobacillus fermentum IMDO 130101 (LT906621) 1056750 1056835 + Leu AAG -
>C191012476 CP016803 Firmicutes Lactobacillus fermentum SK152 (CP016803) 911546 911461 - Leu AAG -
>C191012500 CP016803 Firmicutes Lactobacillus fermentum SK152 (CP016803) 48967 48882 - Leu AAG -
>C191105227 CP033371 Firmicutes Lactobacillus fermentum DR9 (CP033371) 676166 676081 - Leu AAG -
>C191119238 CP034099 Firmicutes Lactobacillus fermentum LMT2-75 (CP034099) 1916613 1916528 - Leu AAG -
>C191119249 CP034099 Firmicutes Lactobacillus fermentum LMT2-75 (CP034099) 457592 457507 - Leu AAG -
>C191121344 CP034193 Firmicutes Lactobacillus fermentum YL-11 (CP034193) 278744 278829 + Leu AAG -
>C191121368 CP034193 Firmicutes Lactobacillus fermentum YL-11 (CP034193) 1027476 1027561 + Leu AAG -
>C191134215 CP035054 Firmicutes Lactobacillus fermentum SRCM103285 (CP035054) 1855835 1855750 - Leu AAG -
>C191134239 CP035054 Firmicutes Lactobacillus fermentum SRCM103285 (CP035054) 1004831 1004746 - Leu AAG -
>C191134272 CP035055 Firmicutes Lactobacillus fermentum SRCM 103290 (CP035055) 1126469 1126384 - Leu AAG -
>C191134296 CP035055 Firmicutes Lactobacillus fermentum SRCM 103290 (CP035055) 363435 363350 - Leu AAG -
>W09122622 ACGI01000010 Firmicutes Lactobacillus fermentum ATCC 14931 [ACGI] 12591 12678 + Leu AAG [ENA]
>W09122653 ACGI01000093 Firmicutes Lactobacillus fermentum ATCC 14931 [ACGI] 117 30 - Leu AAG [ENA]
>W141805367 JPKN01000263 Firmicutes Lactobacillus casei [JPKN] 374 287 - Leu AAG [ENA]
>W141805397 JPKN01000388 Firmicutes Lactobacillus casei [JPKN] 4372 4459 + Leu AAG [ENA]
>W1910374044 FUHY01000025 Firmicutes Lactobacillus fermentum S13 (FUHY) 5857 5942 + Leu AAG [ENA]
>W1910374070 FUHY01000058 Firmicutes Lactobacillus fermentum S13 (FUHY) 10698 10783 + Leu AAG [ENA]
>W1910374089 FUHZ01000013 Firmicutes Lactobacillus fermentum S6 (FUHZ) 5857 5942 + Leu AAG [ENA]
>W1910374090 FUHZ01000014 Firmicutes Lactobacillus fermentum S6 (FUHZ) 10698 10783 + Leu AAG [ENA]
>W1910954286 NJPQ01000004 Firmicutes Lactobacillus fermentum SHI-2 (NJPQ) 5878 5963 + Leu AAG [ENA]
>W1910954314 NJPQ01000015 Firmicutes Lactobacillus fermentum SHI-2 (NJPQ) 4462 4547 + Leu AAG [ENA]
>W1911533689 OKQY01000002 Firmicutes Lactobacillus fermentum CECT 9269 (OKQY) 12683 12768 + Leu AAG [ENA]
>W1911533698 OKQY01000013 Firmicutes Lactobacillus fermentum CECT 9269 (OKQY) 44582 44667 + Leu AAG [ENA]
>W1810058962 PDKX01000015 Firmicutes Lactobacillus fermentum NCDC 400 (PDKX) 2104 2019 - Leu AAG [ENA]
>W1810058966 PDKX01000018 Firmicutes Lactobacillus fermentum NCDC 400 (PDKX) 21857 21772 - Leu AAG [ENA]
>W1810090564 PGGE01000001 Firmicutes Lactobacillus fermentum 103 (PGGE) 125117 125032 - Leu AAG [ENA]
>W1810090601 PGGE01000028 Firmicutes Lactobacillus fermentum 103 (PGGE) 10002 10087 + Leu AAG [ENA]
>W1810090620 PGGI01000004 Firmicutes Lactobacillus fermentum 279 (PGGI) 100299 100214 - Leu AAG [ENA]
>W1810090656 PGGI01000055 Firmicutes Lactobacillus fermentum 279 (PGGI) 2295 2380 + Leu AAG [ENA]
>W1810090674 PGGJ01000014 Firmicutes Lactobacillus fermentum 311 (PGGJ) 44867 44952 + Leu AAG [ENA]
>W1810090688 PGGJ01000033 Firmicutes Lactobacillus fermentum 311 (PGGJ) 12712 12797 + Leu AAG [ENA]
>W1810190822 PKKD01000013 Firmicutes Lactobacillus fermentum UMB0187 (PKKD) 43952 44037 + Leu AAG [ENA]
>W1810190829 PKKD01000041 Firmicutes Lactobacillus fermentum UMB0187 (PKKD) 3529 3444 - Leu AAG [ENA]
>W1810196545 PNBB01000032 Firmicutes Lactobacillus fermentum LfU21 (PNBB) 14580 14665 + Leu AAG [ENA]
>W1810196548 PNBB01000048 Firmicutes Lactobacillus fermentum LfU21 (PNBB) 911 996 + Leu AAG [ENA]
>W1810223757 POTQ01000002 Firmicutes Lactobacillus fermentum CRL1446 (POTQ) 65782 65867 + Leu AAG [ENA]
>W1810223778 POTQ01000019 Firmicutes Lactobacillus fermentum CRL1446 (POTQ) 802 717 - Leu AAG [ENA]
>W1810297053 PTLW01000023 Firmicutes Lactobacillus fermentum MD IIE-4657 (PTLW) 6467 6382 - Leu AAG [ENA]
>W1810297054 PTLW01000037 Firmicutes Lactobacillus fermentum MD IIE-4657 (PTLW) 10472 10557 + Leu AAG [ENA]
>W1810473344 QAHK01000029 Firmicutes Lactobacillus fermentum DS13_7 (QAHK) 13273 13188 - Leu AAG [ENA]
>W1810473347 QAHK01000046 Firmicutes Lactobacillus fermentum DS13_7 (QAHK) 9156 9071 - Leu AAG [ENA]
>W1810489173 QAZV01000026 Firmicutes Lactobacillus fermentum DS19_7 (QAZV) 10546 10631 + Leu AAG [ENA]
>W1810489174 QAZV01000038 Firmicutes Lactobacillus fermentum DS19_7 (QAZV) 9154 9069 - Leu AAG [ENA]
>W1810695483 QLNN01000022 Firmicutes Lactobacillus fermentum LF2 (QLNN) 12645 12730 + Leu AAG [ENA]
>W1810695508 QLNN01000046 Firmicutes Lactobacillus fermentum LF2 (QLNN) 30827 30912 + Leu AAG [ENA]
>W1810705621 QMJL01000033 Firmicutes Lactobacillus fermentum KMB_612 (QMJL) 9062 8977 - Leu AAG [ENA]
>W1810705624 QMJL01000049 Firmicutes Lactobacillus fermentum KMB_612 (QMJL) 9820 9735 - Leu AAG [ENA]
>W1810705648 QMJM01000018 Firmicutes Lactobacillus fermentum KMB_613 (QMJM) 12589 12674 + Leu AAG [ENA]
>W1810705652 QMJM01000022 Firmicutes Lactobacillus fermentum KMB_613 (QMJM) 30858 30943 + Leu AAG [ENA]
>W1810811217 QRYA01000035 Firmicutes Lactobacillus fermentum AF16-22LB (QRYA) 12604 12689 + Leu AAG [ENA]
>W1810811821 QRYM01000001 Firmicutes Lactobacillus fermentum AF15-40LB (QRYM) 19324 19409 + Leu AAG [ENA]
>W1810811846 QRYM01000012 Firmicutes Lactobacillus fermentum AF15-40LB (QRYM) 4446 4361 - Leu AAG [ENA]
>W1810814646 QSAL01000003 Firmicutes Lactobacillus fermentum AF11-4-H (QSAL) 15448 15533 + Leu AAG [ENA]
>W1810814652 QSAL01000015 Firmicutes Lactobacillus fermentum AF11-4-H (QSAL) 38623 38708 + Leu AAG [ENA]
>C151084238 CP011536 Firmicutes Lactobacillus fermentum 3872 320381 320468 + Leu AAG -
>C151084262 CP011536 Firmicutes Lactobacillus fermentum 3872 1282899 1282986 + Leu AAG -
>W10103370 ACQG01000001 Firmicutes Lactobacillus fermentum 28-3-CHN [ACQG] 4693 4606 - Leu AAG [ENA]
>W10103384 ACQG01000056 Firmicutes Lactobacillus fermentum 28-3-CHN [ACQG] 123961 123874 - Leu AAG [ENA]
>W1510022526 CBZV010000004 Firmicutes Lactobacillus fermentum 222 [CBZV] 96830 96743 - Leu AAG [ENA]
>W1510022535 CBZV010000010 Firmicutes Lactobacillus fermentum 222 [CBZV] 10389 10476 + Leu AAG [ENA]
>C10108341 CP002033 Firmicutes Lactobacillus fermentum CECT 5716 314215 314302 + Leu AAG [Ensembl]
>C10108365 CP002033 Firmicutes Lactobacillus fermentum CECT 5716 1168259 1168346 + Leu AAG [Ensembl]
>W11103526 ACQG01000001 Firmicutes Lactobacillus fermentum 28-3-CHN [ACQG] 4693 4606 - Leu AAG [ENA]
>W11103540 ACQG01000056 Firmicutes Lactobacillus fermentum 28-3-CHN [ACQG] 123961 123874 - Leu AAG [ENA]
>W1511567826 LAIK01000005 Firmicutes Lactobacillus fermentum LfQi6 [LAIK] 233856 233769 - Leu AAG [ENA]
>W1511567829 LAIK01000006 Firmicutes Lactobacillus fermentum LfQi6 [LAIK] 179466 179379 - Leu AAG [ENA]
>W1511589480 LBDG01000005 Firmicutes Lactobacillus fermentum 39 [LBDG] 1436 1523 + Leu AAG [ENA]
>W1511589492 LBDG01000017 Firmicutes Lactobacillus fermentum 39 [LBDG] 12693 12606 - Leu AAG [ENA]
>W1511589541 LBDH01000021 Firmicutes Lactobacillus fermentum 90 TC-4 [LBDH] 12005 12092 + Leu AAG [ENA]
>C161077708 CP014787 Firmicutes Lactobacillus oris J-1 2800383 2800296 - Leu AAG -
>C161077719 CP014787 Firmicutes Lactobacillus oris J-1 1608420 1608333 - Leu AAG -
>W1610083172 CBUR010000030 Firmicutes Lactobacillus fermentum L930BB (CBUR) 10447 10534 + Leu AAG [ENA]
>W1610083200 CBUR010000058 Firmicutes Lactobacillus fermentum L930BB (CBUR) 6134 6047 - Leu AAG [ENA]
>C131016161 CP005958 Firmicutes Lactobacillus fermentum F-6 300823 300910 + Leu AAG [Ensembl]
>C131016185 CP005958 Firmicutes Lactobacillus fermentum F-6 1130395 1130482 + Leu AAG [Ensembl]
>W1610527923 JQAU01000023 Firmicutes Lactobacillus fermentum (JQAU) 24043 24130 + Leu AAG [ENA]
>W1610527924 JQAU01000034 Firmicutes Lactobacillus fermentum (JQAU) 10818 10905 + Leu AAG [ENA]
>W1610647387 LJFJ01000004 Firmicutes Lactobacillus fermentum (LJFJ) 386611 386524 - Leu AAG [ENA]
>W1610647408 LJFJ01000006 Firmicutes Lactobacillus fermentum (LJFJ) 91803 91890 + Leu AAG [ENA]
>W1610665541 LJWZ01000032 Firmicutes Lactobacillus fermentum (LJWZ) 100337 100250 - Leu AAG [ENA]
>W1610665548 LJWZ01000073 Firmicutes Lactobacillus fermentum (LJWZ) 4543 4456 - Leu AAG [ENA]
>W1710088292 CBUR010000030 Firmicutes Lactobacillus fermentum L930BB (CBUR) 10447 10534 + Leu AAG [ENA]
>W1710088320 CBUR010000058 Firmicutes Lactobacillus fermentum L930BB (CBUR) 6134 6047 - Leu AAG [ENA]
>W1710629554 JQAU01000023 Firmicutes Lactobacillus fermentum (JQAU) 24043 24130 + Leu AAG [ENA]
>W1710629555 JQAU01000034 Firmicutes Lactobacillus fermentum (JQAU) 10818 10905 + Leu AAG [ENA]
Identical group No.181974 (7 seq.)
>PL191001760 LR214965 Tenericutes Mycoplasma fermentans NCTC10117 plasmid:11 (LR214965) 90334 90250 - Leu AAG [ENA]
>PL191001811 LR214999 Tenericutes Mycoplasma conjunctivae NCTC10147 plasmid:3 (LR214999) 100742 100658 - Leu AAG [ENA]
>W1910002643 ATFG01000030 Tenericutes Mycoplasma fermentans MF-I1 (ATFG) 78641 78557 - Leu AAG [ENA]
>W1910002678 ATFH01000026 Tenericutes Mycoplasma fermentans MF-I2 (ATFH) 18812 18728 - Leu AAG [ENA]
>C09107672 AP009608 Tenericutes Mycoplasma fermentans PG18 539164 539080 - Leu AAG [Ensembl]
>C11114258 CP001995 Tenericutes Mycoplasma fermentans JER 532699 532615 - Leu AAG [Ensembl]
>C11114293 CP002458 Tenericutes Mycoplasma fermentans M64 615823 615739 - Leu AAG [Ensembl]
Identical group No.185513 (13 seq.)
>PL191001771 LR214986 Tenericutes Mycoplasma cynos NCTC10142 plasmid:13 (LR214986) 575069 575153 + Leu AAG [ENA]
>C191218103 LR214950 Tenericutes Mycoplasma gallinaceum NCTC10183 (LR214950) 253254 253170 - Leu AAG -
>C191218457 LR215024 Tenericutes Mycoplasma glycophilum NCTC10194 (LR215024) 461609 461525 - Leu AAG -
>C191218495 LR215031 Tenericutes Mycoplasma gallopavonis NCTC10186 (LR215031) 316238 316322 + Leu AAG -
>C191218577 LR215036 Tenericutes Mycoplasma citelli NCTC10181 (LR215036) 66093 66009 - Leu AAG -
>C191218611 LR215039 Tenericutes Mycoplasma columborale NCTC10179 (LR215039) 222795 222879 + Leu AAG -
>W141561108 JHYE01000004 Tenericutes Mycoplasma glycophilum ATCC 35277 [JHYE] 16430 16346 - Leu AAG [ENA]
>W141731297 JNIZ01000002 Tenericutes Mycoplasma sturni DSM 22021 [JNIZ] 243000 243084 + Leu AAG [ENA]
>W141732358 JNJZ01000007 Tenericutes Mycoplasma columborale ATCC 29258 [JNJZ] 1129 1213 + Leu AAG [ENA]
>W141807425 JPOK01000004 Tenericutes Mycoplasma buteonis [JPOK] 3236 3320 + Leu AAG [ENA]
>W1911768471 QXGN01000041 Tenericutes Mycoplasma gallopavonis WR1 (QXGN) 1528 1444 - Leu AAG [ENA]
>C151075549 CP011021 Tenericutes Mycoplasma gallinaceum B2096 8B 694501 694585 + Leu AAG [Ensembl]
>C151099837 HF559394 Tenericutes Mycoplasma cynos C142 550808 550892 + Leu AAG [Ensembl]
Identical group No.372729 (1 seq.)
>PL171000372 CP002214 Firmicutes Paenibacillus polymyxa SC2 plasmid:pSC2 5029 5105 + Leu AAG [ENA]
Select
Sequence ID Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species Start End Direction AA Anticodon Genome/Seq. Info. Decision
Download Sequence Representative sequence of each cluster
View ClustalW result

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