tRNA genes clustered and arranged according to each identical group

Anticodon = TGC

HIT: 3 Group(s).

Sequence ID	Genome ID (or Accession No.)	Phylum/Class (Sample source for ENV)	Species	Start	End	Direction	AA	Anticodon	Genome/Seq. Info.	Decision
Identical group No.456368 (120 seq.)
>W1710860585	LMCZ01000040	Alphaproteobacteria	Rhizobium sp. Root1204 [LMCZ]	470777	470702	-	Ala	TGC	[ENA]	○
>W1710863224	LMEY01000001	Alphaproteobacteria	Rhizobium sp. Root1334 [LMEY]	1531105	1531030	-	Ala	TGC	[ENA]	○
>W1710863379	LMFB01000027	Alphaproteobacteria	Rhizobium sp. Root483D2 [LMFB]	2400	2475	+	Ala	TGC	[ENA]	○
>W1710867389	LMIF01000029	Alphaproteobacteria	Rhizobium sp. Root73 [LMIF]	4219	4144	-	Ala	TGC	[ENA]	○
>W1710873056	LMMM01000015	Alphaproteobacteria	Rhizobium sp. Leaf262 [LMMM]	4292	4217	-	Ala	TGC	[ENA]	○
>W1710916269	LNUW01000030	Alphaproteobacteria	Agrobacterium bohemicum R89-1 [LNUW]	2252	2327	+	Ala	TGC	[ENA]	○
>W1711022107	LQZT01000024	Alphaproteobacteria	Hoeflea olei [LQZT]	2451	2526	+	Ala	TGC	[ENA]	○
>W1711081112	LSRO01000156	Alphaproteobacteria	Rhizobium sp. 58 [LSRO]	3988	3913	-	Ala	TGC	[ENA]	○
>W1711081158	LSRP01000156	Alphaproteobacteria	Pararhizobium antarcticum 59 [LSRP]	2421	2496	+	Ala	TGC	[ENA]	○
>W1711214026	LXKU01000021	Alphaproteobacteria	Agrobacterium rubi [LXKU]	455	530	+	Ala	TGC	[ENA]	○
>W1711214031	LXKU01000025	Alphaproteobacteria	Agrobacterium rubi [LXKU]	397	472	+	Ala	TGC	[ENA]	○
>W1711489035	MKIM01000009	Alphaproteobacteria	Rhizobium oryziradicis [MKIM]	77	2	-	Ala	TGC	[ENA]	○
>W1711489081	MKIM01000030	Alphaproteobacteria	Rhizobium oryziradicis [MKIM]	875	800	-	Ala	TGC	[ENA]	○
>W131237232	AUNP01000193	Alphaproteobacteria	Rhizobiales bacterium JGI 0001002-O7 [AUNP]	1175	1250	+	Ala	TGC	[ENA]	○
>W131237516	AUOR01000025	Gammaproteobacteria	Xanthomonadaceae bacterium JGI 0001002-D18 [AUOR]	830	755	-	Ala	TGC	[ENA]	○
>W131237547	AUOT01000218	Bacteroidota	Flavobacterium sp. JGI 0001001-D01 [AUOT]	5912	5837	-	Ala	TGC	[ENA]	○
>C171083532	CP018779	Alphaproteobacteria	Brucella pituitosa AA2 [CP018779, CP018780, CP018782]	374590	374665	+	Ala	TGC	-	○
>C171083556	CP018780	Alphaproteobacteria	Brucella pituitosa AA2 [CP018779, CP018780, CP018782]	2060524	2060449	-	Ala	TGC	-	○
>C171083560	CP018780	Alphaproteobacteria	Brucella pituitosa AA2 [CP018779, CP018780, CP018782]	1839430	1839355	-	Ala	TGC	-	○
>C171083577	CP018782	Alphaproteobacteria	Brucella pituitosa AA2 [CP018779, CP018780, CP018782]	1074945	1075020	+	Ala	TGC	-	○
>C171083586	CP018782	Alphaproteobacteria	Brucella pituitosa AA2 [CP018779, CP018780, CP018782]	411395	411320	-	Ala	TGC	-	○
>W141025332	AKVI01000122	Alphaproteobacteria	Ochrobactrum sp. CDB2 [AKVI]	318	243	-	Ala	TGC	[ENA]	○
>W08005569	ABIA02000006	Alphaproteobacteria	Hoeflea phototrophica DFL-43 [ABIA]	105370	105298	-	Ala	TGC	[ENA]	○
>W08005589	ABIA02000018	Alphaproteobacteria	Hoeflea phototrophica DFL-43 [ABIA]	17815	17890	+	Ala	TGC	[ENA]	○
>W141213183	AZRT01000004	Alphaproteobacteria	Brucella rhizosphaerae SJY1 [AZRT]	3756	3681	-	Ala	TGC	[ENA]	○
>W141237988	BBJU01000046	Alphaproteobacteria	Agrobacterium rubi NBRC 13261 [BBJU]	1953	2028	+	Ala	TGC	[ENA]	○
>W141237991	BBJU01000054	Alphaproteobacteria	Agrobacterium rubi NBRC 13261 [BBJU]	340	415	+	Ala	TGC	[ENA]	○
>W141237993	BBJU01000056	Alphaproteobacteria	Agrobacterium rubi NBRC 13261 [BBJU]	262	187	-	Ala	TGC	[ENA]	○
>W141276550	JADW01000071	Alphaproteobacteria	Agrobacterium larrymoorei ATCC 51759 [JADW]	294	219	-	Ala	TGC	[ENA]	○
>WENV183730203	PJTR01004196	[PJTR] soil metagenome; Soil (2) enriched on wood chips: beechwood xylan treatment		163	88	-	Ala	TGC	[ENA]	◯
>WENV183731028	PJTS01004209	[PJTS] soil metagenome; Soil (2) enriched on wood chips: alkali lignin treatment		1630	1555	-	Ala	TGC	[ENA]	◯
>WENV183733567	PJTY01004915	[PJTY] soil metagenome; Soil enriched (2) on filter paper: alkali lignin treatment		755	830	+	Ala	TGC	[ENA]	◯
>VRL0100050	AF191073	Herpesvirales	Stealth virus 1	2292	2217	-	Ala	TGC	[ENA]	○
>C181069672	CP022603	Alphaproteobacteria	[Ochrobactrum] quorumnocens A44 [CP022603, CP022604]	1796056	1796131	+	Ala	TGC	-	○
>C181069676	CP022603	Alphaproteobacteria	[Ochrobactrum] quorumnocens A44 [CP022603, CP022604]	994219	994144	-	Ala	TGC	-	○
>C181069700	CP022604	Alphaproteobacteria	[Ochrobactrum] quorumnocens A44 [CP022603, CP022604]	2238576	2238501	-	Ala	TGC	-	○
>C181069704	CP022604	Alphaproteobacteria	[Ochrobactrum] quorumnocens A44 [CP022603, CP022604]	1904558	1904483	-	Ala	TGC	-	○
>C191170894	CP039691	Alphaproteobacteria	Agrobacterium larrymoorei CFBP5473 [CP039691, CP039692]	567702	567777	+	Ala	TGC	-	○
>C191170930	CP039691	Alphaproteobacteria	Agrobacterium larrymoorei CFBP5473 [CP039691, CP039692]	196428	196353	-	Ala	TGC	-	○
>C191170938	CP039692	Alphaproteobacteria	Agrobacterium larrymoorei CFBP5473 [CP039691, CP039692]	1464360	1464435	+	Ala	TGC	-	○
>C191170942	CP039692	Alphaproteobacteria	Agrobacterium larrymoorei CFBP5473 [CP039691, CP039692]	943595	943520	-	Ala	TGC	-	○
>C191170945	CP039692	Alphaproteobacteria	Agrobacterium larrymoorei CFBP5473 [CP039691, CP039692]	545564	545489	-	Ala	TGC	-	○
>W141816038	JQJO01000031	Alphaproteobacteria	Rhizobium sp. OK665 [JQJO]	2392	2467	+	Ala	TGC	[ENA]	○
>W1910226252	FMUD01000071	Alphaproteobacteria	Agrobacterium sp. DSM 25558 [FMUD]	2028	2103	+	Ala	TGC	[ENA]	○
>W1910226282	FMUE01000005	Alphaproteobacteria	Agrobacterium rosae DSM 25559 [FMUE]	344382	344457	+	Ala	TGC	[ENA]	○
>W1910226300	FMUE01000039	Alphaproteobacteria	Agrobacterium rosae DSM 25559 [FMUE]	662	737	+	Ala	TGC	[ENA]	○
>W1911084348	NNRJ01000011	Alphaproteobacteria	Brucella thiophenivorans DSM 7216 [NNRJ]	3979	3904	-	Ala	TGC	[ENA]	○
>W1911084456	NNRL01000158	Alphaproteobacteria	Brucella grignonensis OgA9a [NNRL]	229742	229667	-	Ala	TGC	[ENA]	○
>W1911084493	NNRM01000012	Alphaproteobacteria	Brucella pseudogrignonensis CCUG 30717 [NNRM]	34194	34119	-	Ala	TGC	[ENA]	○
>W1911422610	NXEJ01000009	Alphaproteobacteria	Agrobacterium rosae NCPPB 1650 [NXEJ]	361500	361575	+	Ala	TGC	[ENA]	○
>W1911422617	NXEJ01000023	Alphaproteobacteria	Agrobacterium rosae NCPPB 1650 [NXEJ]	599	524	-	Ala	TGC	[ENA]	○
>W1911497555	OCPC01000011	Alphaproteobacteria	Hoeflea halophila KCTC 23107 [OCPC]	2509	2584	+	Ala	TGC	[ENA]	○
>W1911565526	PCOC01000001	Alphaproteobacteria	Ochrobactrum vermis MYb71 [PCOC]	2465655	2465580	-	Ala	TGC	[ENA]	○
>W1911565530	PCOC01000001	Alphaproteobacteria	Ochrobactrum vermis MYb71 [PCOC]	2231320	2231245	-	Ala	TGC	[ENA]	○
>W1911565544	PCOC01000002	Alphaproteobacteria	Ochrobactrum vermis MYb71 [PCOC]	634267	634342	+	Ala	TGC	[ENA]	○
>W1911565554	PCOC01000002	Alphaproteobacteria	Ochrobactrum vermis MYb71 [PCOC]	1675020	1674945	-	Ala	TGC	[ENA]	○
>W1911565588	PCOD01000002	Alphaproteobacteria	Brucella pseudogrignonensis MYb70 [PCOD]	29255	29180	-	Ala	TGC	[ENA]	○
>W1911565650	PCOE01000033	Alphaproteobacteria	Ochrobactrum sp. MYb68 [PCOE]	3753	3678	-	Ala	TGC	[ENA]	○
>W1911565713	PCOG01000001	Alphaproteobacteria	Brucella pseudogrignonensis MYb58 [PCOG]	2101550	2101475	-	Ala	TGC	[ENA]	○
>W1911565717	PCOG01000001	Alphaproteobacteria	Brucella pseudogrignonensis MYb58 [PCOG]	1873103	1873028	-	Ala	TGC	[ENA]	○
>W1911565732	PCOG01000002	Alphaproteobacteria	Brucella pseudogrignonensis MYb58 [PCOG]	295545	295620	+	Ala	TGC	[ENA]	○
>W1911565740	PCOG01000002	Alphaproteobacteria	Brucella pseudogrignonensis MYb58 [PCOG]	1397230	1397155	-	Ala	TGC	[ENA]	○
>W1911565748	PCOG01000003	Alphaproteobacteria	Brucella pseudogrignonensis MYb58 [PCOG]	310868	310943	+	Ala	TGC	[ENA]	○
>W1911565899	PCOK01000002	Alphaproteobacteria	Brucella pseudogrignonensis MYb37 [PCOK]	776100	776175	+	Ala	TGC	[ENA]	○
>W1911565965	PCOL01000050	Alphaproteobacteria	Ochrobactrum sp. MYb29 [PCOL]	2497	2572	+	Ala	TGC	[ENA]	○
>W1911566012	PCOM01000017	Alphaproteobacteria	Ochrobactrum sp. MYb19 [PCOM]	3291	3216	-	Ala	TGC	[ENA]	○
>W1911566059	PCON01000019	Alphaproteobacteria	Ochrobactrum sp. MYb18 [PCON]	3291	3216	-	Ala	TGC	[ENA]	○
>W1911566083	PCOO01000001	Alphaproteobacteria	Ochrobactrum sp. MYb15 [PCOO]	2065319	2065244	-	Ala	TGC	[ENA]	○
>W1911566087	PCOO01000001	Alphaproteobacteria	Ochrobactrum sp. MYb15 [PCOO]	1839896	1839821	-	Ala	TGC	[ENA]	○
>W1911566106	PCOO01000002	Alphaproteobacteria	Ochrobactrum sp. MYb15 [PCOO]	1580014	1580089	+	Ala	TGC	[ENA]	○
>W1911566112	PCOO01000002	Alphaproteobacteria	Ochrobactrum sp. MYb15 [PCOO]	999718	999643	-	Ala	TGC	[ENA]	○
>W1911566163	PCOP01000017	Alphaproteobacteria	Ochrobactrum sp. MYb14 [PCOP]	3291	3216	-	Ala	TGC	[ENA]	○
>W1911566237	PCOR01000001	Alphaproteobacteria	Brucella thiophenivorans MYb6 [PCOR]	2065319	2065244	-	Ala	TGC	[ENA]	○
>W1911566241	PCOR01000001	Alphaproteobacteria	Brucella thiophenivorans MYb6 [PCOR]	1839896	1839821	-	Ala	TGC	[ENA]	○
>W1911566255	PCOR01000002	Alphaproteobacteria	Brucella thiophenivorans MYb6 [PCOR]	2527	2602	+	Ala	TGC	[ENA]	○
>W1911566265	PCOR01000002	Alphaproteobacteria	Brucella thiophenivorans MYb6 [PCOR]	1069399	1069324	-	Ala	TGC	[ENA]	○
>W1810084227	PEQT01000022	Alphaproteobacteria	Agrobacterium rosae B20.3 [PEQT]	4059	3984	-	Ala	TGC	[ENA]	○
>W1810089060	PGEL01000020	Alphaproteobacteria	Agrobacterium bohemicum R90 [PGEL]	2252	2327	+	Ala	TGC	[ENA]	○
>W1810119006	PHRE01000004	Alphaproteobacteria	Brucella pituitosa BU72 [PHRE]	487910	487985	+	Ala	TGC	[ENA]	○
>W1810423392	PYSY02000001	Alphaproteobacteria	Brucella pituitosa CCUG 50899 [PYSY]	2273022	2272947	-	Ala	TGC	[ENA]	○
>W1810423396	PYSY02000001	Alphaproteobacteria	Brucella pituitosa CCUG 50899 [PYSY]	2031645	2031570	-	Ala	TGC	[ENA]	○
>W1810423415	PYSY02000002	Alphaproteobacteria	Brucella pituitosa CCUG 50899 [PYSY]	1599785	1599860	+	Ala	TGC	[ENA]	○
>W1810423420	PYSY02000002	Alphaproteobacteria	Brucella pituitosa CCUG 50899 [PYSY]	964815	964740	-	Ala	TGC	[ENA]	○
>SRA1014818	SRR023845.326026	Community proteogenomics reveals insights into the physiology of phyllosphere bacteria (SRP001120)		137	212	+	Ala	TGC	[SRA]
>C151083072	CP011479	Alphaproteobacteria	Hoeflea sp. IMCC20628 [CP011479]	1159	1234	+	Ala	TGC	[Ensembl]	○
>C151083075	CP011479	Alphaproteobacteria	Hoeflea sp. IMCC20628 [CP011479]	140647	140722	+	Ala	TGC	[Ensembl]	○
>W1510591348	CTZA01000868	Bacillota	Staphylococcus aureus DEU37 [CTZA]	200	125	-	Ala	TGC	[ENA]	○
>W1510591434	CTZB01000317	Bacillota	Staphylococcus aureus DEU28 [CTZB]	1029	954	-	Ala	TGC	[ENA]	○
>W1510591572	CTZD01001919	Bacillota	Staphylococcus aureus DEU35 [CTZD]	721	796	+	Ala	TGC	[ENA]	○
>W1510591723	CTZH01000792	Bacillota	Staphylococcus aureus DEU42 [CTZH]	307	232	-	Ala	TGC	[ENA]	○
>W1510593016	CUAH01001379	Bacillota	Staphylococcus aureus DEU50 [CUAH]	192	267	+	Ala	TGC	[ENA]	○
>W1510593259	CUAL01000888	Bacillota	Staphylococcus aureus DEU30 [CUAL]	306	231	-	Ala	TGC	[ENA]	○
>W1510593432	CUAN01001713	Bacillota	Staphylococcus aureus DEU43 [CUAN]	306	231	-	Ala	TGC	[ENA]	○
>W1510593685	CUAQ01015929	Bacillota	Staphylococcus aureus DEU27 [CUAQ]	80	5	-	Ala	TGC	[ENA]	○
>W1510594299	CUBB01000396	Bacillota	Staphylococcus aureus DEU47 [CUBB]	80	5	-	Ala	TGC	[ENA]	○
>W1510595762	CUCA01003536	Bacillota	Staphylococcus aureus DEU36 [CUCA]	143	218	+	Ala	TGC	[ENA]	○
>W1510595797	CUCB01000887	Bacillota	Staphylococcus aureus DEU29 [CUCB]	260	335	+	Ala	TGC	[ENA]	○
>W1510597241	CUDA01002227	Bacillota	Staphylococcus aureus DEU38 [CUDA]	274	349	+	Ala	TGC	[ENA]	○
>W1510597644	CUDH01026423	Bacillota	Staphylococcus aureus DEU49 [CUDH]	1	76	+	Ala	TGC	[ENA]	○
>W1510597802	CUDK01002154	Bacillota	Staphylococcus aureus DEU39 [CUDK]	200	125	-	Ala	TGC	[ENA]	○
>W1510599062	CUEG01035752	Bacillota	Staphylococcus aureus DEU25 [CUEG]	80	5	-	Ala	TGC	[ENA]	○
>W1511480232	JWIT01000061	Alphaproteobacteria	Agrobacterium arsenijevicii KFB 330 [JWIT]	2329	2404	+	Ala	TGC	[ENA]	○
>W1511480725	JWJH01000079	Alphaproteobacteria	Rhizobium nepotum Jul-39 [JWJH]	2334	2409	+	Ala	TGC	[ENA]	○
>W1511509149	JXQV01000002	Alphaproteobacteria	Agrobacterium tumefaciens MEJ076 [JXQV]	635	560	-	Ala	TGC	[ENA]	○
>W1511509160	JXQV01000006	Alphaproteobacteria	Agrobacterium tumefaciens MEJ076 [JXQV]	309	234	-	Ala	TGC	[ENA]	○
>W1511509182	JXQV01000016	Alphaproteobacteria	Agrobacterium tumefaciens MEJ076 [JXQV]	196	121	-	Ala	TGC	[ENA]	○
>W1511509184	JXQV01000020	Alphaproteobacteria	Agrobacterium tumefaciens MEJ076 [JXQV]	1992	2067	+	Ala	TGC	[ENA]	○
>C161090717	CP015775	Alphaproteobacteria	Brucella pseudogrignonensis K8 [CP015775, CP015776]	2520710	2520785	+	Ala	TGC	[Ensembl]	○
>C161090726	CP015775	Alphaproteobacteria	Brucella pseudogrignonensis K8 [CP015775, CP015776]	3559605	3559530	-	Ala	TGC	[Ensembl]	○
>C161090735	CP015775	Alphaproteobacteria	Brucella pseudogrignonensis K8 [CP015775, CP015776]	1977607	1977532	-	Ala	TGC	[Ensembl]	○
>C161090739	CP015775	Alphaproteobacteria	Brucella pseudogrignonensis K8 [CP015775, CP015776]	1753418	1753343	-	Ala	TGC	[Ensembl]	○
>C161090753	CP015776	Alphaproteobacteria	Brucella pseudogrignonensis K8 [CP015775, CP015776]	242127	242052	-	Ala	TGC	-	○
>W1610722931	LMCZ01000040	Alphaproteobacteria	Rhizobium sp. Root1204 [LMCZ]	470777	470702	-	Ala	TGC	[ENA]	○
>W1610725570	LMEY01000001	Alphaproteobacteria	Rhizobium sp. Root1334 [LMEY]	1531105	1531030	-	Ala	TGC	[ENA]	○
>W1610725725	LMFB01000027	Alphaproteobacteria	Rhizobium sp. Root483D2 [LMFB]	2400	2475	+	Ala	TGC	[ENA]	○
>W1610729735	LMIF01000029	Alphaproteobacteria	Rhizobium sp. Root73 [LMIF]	4219	4144	-	Ala	TGC	[ENA]	○
>W1610735402	LMMM01000015	Alphaproteobacteria	Rhizobium sp. Leaf262 [LMMM]	4292	4217	-	Ala	TGC	[ENA]	○
>W1610774508	LNUW01000030	Alphaproteobacteria	Agrobacterium bohemicum R89-1 [LNUW]	2252	2327	+	Ala	TGC	[ENA]	○
>W1611001030	LXKU01000021	Alphaproteobacteria	Agrobacterium rubi [LXKU]	455	530	+	Ala	TGC	[ENA]	○
>W1611001035	LXKU01000025	Alphaproteobacteria	Agrobacterium rubi [LXKU]	397	472	+	Ala	TGC	[ENA]	○
Identical group No.539787 (6 seq.)
>WENV180354931	OBNE01036398	[OBNE] groundwater metagenome; groundwater		338	263	-	Ala	TGC	[ENA]	◯
>WENV183687459	ORMF011148134	[ORMF] groundwater metagenome; groundwater		264	189	-	Ala	TGC	[ENA]	◯
>WENV170227749	CEQF01130296	[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)		333	258	-	Ala	TGC	[ENA]	◯
>WENV170765902	LWDU01039861	[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater		2220	2145	-	Ala	TGC	[ENA]	◯
>WENV170917150	MDTE01188452	[MDTE] marine metagenome; seawater		81	6	-	Ala	TGC	[ENA]	◯
>VRL181000570	KX853510	unclassifiedviruses	Virus Rctr197k (KX853510)	186545	186470	-	Ala	TGC	[ENA]	○
Identical group No.684206 (2 seq.)
>VRL181000639	KY523104	Varidnaviria	Tupanvirus soda lake (KY523104)	143402	143331	-	Ala	TGC	[ENA]	○
>VRL181000706	MF405918	Varidnaviria	Tupanvirus deep ocean (MF405918)	146188	146117	-	Ala	TGC	[ENA]	○