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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170083491
CEAA01035035
176499
Actinomycetota
CAT
Met
>WENV170082674
CEAA01004361
147806
Actinomycetota
TAA
Leu
>WENV170083221
CEAA01026738
280498
Actinomycetota
GTT
Asn
>WENV170083363
CEAA01030203
280498
Actinomycetota
GTT
Asn
>WENV170082904
CEAA01012810
140768
Actinomycetota
TAG
Leu
>WENV170083586
CEAA01038352
175837
Actinomycetota
ACG
Arg
>WENV170083587
CEAA01038352
175837
Actinomycetota
ACG
Arg
>WENV170083588
CEAA01038352
175837
Actinomycetota
ACG
Arg
>WENV170083217
CEAA01026562
280524
Actinomycetota
TGC
Ala
>WENV170083218
CEAA01026562
280523
Actinomycetota
GGC
Ala
>WENV170083993
CEAA01053332
280523
Actinomycetota
GGC
Ala
>WENV170083362
CEAA01030198
280450
Actinomycetota
TTT
Lys
>WENV170083762
CEAA01044393
56166
Actinomycetota
TGA
Ser
>WENV170083222
CEAA01026893
480329
Actinomycetota
CCC
Gly
>WENV170083836
CEAA01047465
175882
Actinomycetota
TGG
Pro
>WENV170083103
CEAA01021188
480319
Actinomycetota
TTG
Gln
>WENV170082984
CEAA01016269
280489
Actinomycetota
CTC
Glu
>WENV170083311
CEAA01029669
280499
Actinomycetota
CCT
Arg
>WENV170082985
CEAA01016269
398853
Actinomycetota
CTG
Gln
>WENV170083854
CEAA01047802
176642
Actinomycetota
CAA
Leu
>WENV170083726
CEAA01043069
237585
Actinomycetota
TAC
Val
>WENV170083581
CEAA01037739
203883
Actinomycetota
TCT
Arg
>WENV170083924
CEAA01050274
46642
Actinomycetota
CGA
Ser
>WENV170083401
CEAA01031399
104211
Actinomycetota
CAG
Leu
>WENV170083482
CEAA01034889
104211
Actinomycetota
CAG
Leu
>WENV170083490
CEAA01035035
117903
Actinomycetota
GTA
Tyr
>WENV170082903
CEAA01012810
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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