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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170103493
CEAX01049935
175883
Actinomycetota
GAT
Ile
>WENV170103220
CEAX01039440
349003
Actinomycetota
CCG
Arg
>WENV170102118
CEAX01002698
147806
Actinomycetota
TAA
Leu
>WENV170102879
CEAX01028139
280498
Actinomycetota
GTT
Asn
>WENV170102880
CEAX01028139
280498
Actinomycetota
GTT
Asn
>WENV170103317
CEAX01044042
280498
Actinomycetota
GTT
Asn
>WENV170102457
CEAX01015691
140768
Actinomycetota
TAG
Leu
>WENV170102595
CEAX01019663
176638
Actinomycetota
GGG
Pro
>WENV170102955
CEAX01030276
280524
Actinomycetota
TGC
Ala
>WENV170102956
CEAX01030276
280523
Actinomycetota
GGC
Ala
>WENV170102512
CEAX01017369
176555
Actinomycetota
CAT
Met
>WENV170102995
CEAX01031484
175926
Actinomycetota
CAT
Met
>WENV170102751
CEAX01024295
280450
Actinomycetota
TTT
Lys
>WENV170103454
CEAX01048463
56166
Actinomycetota
TGA
Ser
>WENV170103040
CEAX01033316
480329
Actinomycetota
CCC
Gly
>WENV170103501
CEAX01050179
175882
Actinomycetota
TGG
Pro
>WENV170103292
CEAX01042931
480319
Actinomycetota
TTG
Gln
>WENV170103335
CEAX01044749
480319
Actinomycetota
TTG
Gln
>WENV170102893
CEAX01028566
280499
Actinomycetota
CCT
Arg
>WENV170102667
CEAX01021896
176642
Actinomycetota
CAA
Leu
>WENV170103433
CEAX01047992
237585
Actinomycetota
TAC
Val
>WENV170103152
CEAX01037845
203883
Actinomycetota
TCT
Arg
>WENV170102246
CEAX01007675
46642
Actinomycetota
CGA
Ser
>WENV170103487
CEAX01049722
117903
Actinomycetota
GTA
Tyr
>WENV170102456
CEAX01015691
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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