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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
126 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170104464
CEAZ01034035
179231
Actinomycetota
TAC
Val
>WENV170104408
CEAZ01032332
176499
Actinomycetota
CAT
Met
>WENV170104604
CEAZ01041425
176499
Actinomycetota
CAT
Met
>WENV170104740
CEAZ01046124
176499
Actinomycetota
CAT
Met
>WENV170104139
CEAZ01022216
175883
Actinomycetota
GAT
Ile
>WENV170104141
CEAZ01022216
175883
Actinomycetota
GAT
Ile
>WENV170104619
CEAZ01041605
175907
Actinomycetota
TAC
Val
>WENV170105038
CEAZ01059029
285746
Actinomycetota
GGC
Ala
>WENV170103704
CEAZ01003004
147806
Actinomycetota
TAA
Leu
>WENV170104044
CEAZ01018216
280498
Actinomycetota
GTT
Asn
>WENV170104212
CEAZ01024900
280498
Actinomycetota
GTT
Asn
>WENV170104221
CEAZ01024900
280498
Actinomycetota
GTT
Asn
>WENV170104491
CEAZ01035640
280498
Actinomycetota
GTT
Asn
>WENV170104492
CEAZ01035640
280498
Actinomycetota
GTT
Asn
>WENV170104493
CEAZ01035640
280498
Actinomycetota
GTT
Asn
>WENV170105054
CEAZ01059877
280498
Actinomycetota
GTT
Asn
>WENV170105105
CEAZ01061464
280503
Actinomycetota
CCT
Arg
>WENV170104463
CEAZ01034009
295964
Actinomycetota
GTT
Asn
>WENV170103808
CEAZ01007639
459899
Actinomycetota
TTC
Glu
>WENV170104198
CEAZ01023925
459899
Actinomycetota
TTC
Glu
>WENV170103763
CEAZ01005717
56083
Actinomycetota
CGA
Ser
>WENV170104005
CEAZ01016268
140768
Actinomycetota
TAG
Leu
>WENV170104736
CEAZ01046124
140768
Actinomycetota
TAG
Leu
>WENV170105202
CEAZ01065621
140768
Actinomycetota
TAG
Leu
>WENV170104249
CEAZ01026571
176075
Actinomycetota
TCT
Arg
>WENV170104474
CEAZ01035106
175848
Actinomycetota
TGG
Pro
>WENV170104752
CEAZ01046187
20208
Actinomycetota
GAG
Leu
>WENV170104515
CEAZ01036377
59689
Actinomycetota
GGA
Ser
>WENV170103931
CEAZ01012406
175837
Actinomycetota
ACG
Arg
>WENV170103932
CEAZ01012406
175837
Actinomycetota
ACG
Arg
>WENV170104538
CEAZ01037487
175837
Actinomycetota
ACG
Arg
>WENV170104539
CEAZ01037487
175837
Actinomycetota
ACG
Arg
>WENV170104540
CEAZ01037487
175837
Actinomycetota
ACG
Arg
>WENV170104834
CEAZ01049916
175837
Actinomycetota
ACG
Arg
>WENV170104835
CEAZ01049916
175837
Actinomycetota
ACG
Arg
>WENV170104859
CEAZ01050988
175837
Actinomycetota
ACG
Arg
>WENV170104860
CEAZ01050988
175837
Actinomycetota
ACG
Arg
>WENV170104861
CEAZ01050988
175837
Actinomycetota
ACG
Arg
>WENV170104820
CEAZ01049594
29393
Actinomycetota
GCT
Ser
>WENV170104412
CEAZ01032338
280549
Actinomycetota
CAC
Val
>WENV170104577
CEAZ01039639
280549
Actinomycetota
CAC
Val
>WENV170103707
CEAZ01003396
349164
Actinomycetota
CTC
Glu
>WENV170103821
CEAZ01008166
280441
Actinomycetota
CCG
Arg
>WENV170103975
CEAZ01014429
280702
Actinomycetota
GGC
Ala
>WENV170103976
CEAZ01014429
280702
Actinomycetota
GGC
Ala
>WENV170104120
CEAZ01021387
280702
Actinomycetota
GGC
Ala
>WENV170104121
CEAZ01021387
280702
Actinomycetota
GGC
Ala
>WENV170104431
CEAZ01032964
280702
Actinomycetota
GGC
Ala
>WENV170104432
CEAZ01032964
280702
Actinomycetota
GGC
Ala
>WENV170105004
CEAZ01058488
176077
Actinomycetota
CAT
Met
>WENV170103963
CEAZ01013868
241064
Actinomycetota
CTC
Glu
>WENV170104220
CEAZ01024900
176638
Actinomycetota
GGG
Pro
>WENV170104786
CEAZ01047880
176638
Actinomycetota
GGG
Pro
>WENV170104173
CEAZ01023350
280524
Actinomycetota
TGC
Ala
>WENV170104399
CEAZ01031736
280524
Actinomycetota
TGC
Ala
>WENV170104887
CEAZ01052232
280524
Actinomycetota
TGC
Ala
>WENV170104557
CEAZ01038325
398948
Actinomycetota
TTC
Glu
>WENV170104038
CEAZ01017855
291585
Actinomycetota
GCC
Gly
>WENV170104629
CEAZ01041699
291585
Actinomycetota
GCC
Gly
>WENV170104952
CEAZ01056012
150272
Actinomycetota
TAA
Leu
>WENV170103971
CEAZ01014393
280523
Actinomycetota
GGC
Ala
>WENV170104174
CEAZ01023350
280523
Actinomycetota
GGC
Ala
>WENV170104394
CEAZ01031310
280523
Actinomycetota
GGC
Ala
>WENV170104400
CEAZ01031736
280523
Actinomycetota
GGC
Ala
>WENV170104819
CEAZ01049594
175949
Actinomycetota
CAT
Met
>WENV170104013
CEAZ01016388
176555
Actinomycetota
CAT
Met
>WENV170103655
CEAZ01001305
191955
Actinomycetota
TGT
Thr
>WENV170104200
CEAZ01023925
175841
Actinomycetota
TAT
Ile
>WENV170104641
CEAZ01042236
280544
Actinomycetota
GTG
His
>WENV170105057
CEAZ01059917
280536
Actinomycetota
CTT
Lys
>WENV170105058
CEAZ01059917
280536
Actinomycetota
CTT
Lys
>WENV170105059
CEAZ01059917
280536
Actinomycetota
CTT
Lys
>WENV170104006
CEAZ01016268
280496
Actinomycetota
CGT
Thr
>WENV170104194
CEAZ01023925
175872
Actinomycetota
GTC
Asp
>WENV170104199
CEAZ01023925
175872
Actinomycetota
GTC
Asp
>WENV170105095
CEAZ01060986
280703
Actinomycetota
CCT
Arg
>WENV170104409
CEAZ01032332
20205
Actinomycetota
GCT
Ser
>WENV170104364
CEAZ01030298
175926
Actinomycetota
CAT
Met
>WENV170104024
CEAZ01017251
178569
Actinomycetota
CAT
Met
>WENV170104346
CEAZ01029518
280450
Actinomycetota
TTT
Lys
>WENV170104741
CEAZ01046124
280450
Actinomycetota
TTT
Lys
>WENV170104411
CEAZ01032338
468141
Actinomycetota
GAC
Val
>WENV170104576
CEAZ01039639
468141
Actinomycetota
GAC
Val
>WENV170104765
CEAZ01046733
468141
Actinomycetota
GAC
Val
>WENV170104004
CEAZ01016268
323758
Actinomycetota
CGT
Thr
>WENV170104761
CEAZ01046693
56166
Actinomycetota
TGA
Ser
>WENV170104766
CEAZ01046759
358727
Actinomycetota
CCG
Arg
>WENV170105066
CEAZ01060371
358727
Actinomycetota
CCG
Arg
>WENV170104389
CEAZ01031297
480329
Actinomycetota
CCC
Gly
>WENV170104732
CEAZ01046124
480329
Actinomycetota
CCC
Gly
>WENV170103962
CEAZ01013868
483206
Actinomycetota
CTG
Gln
>WENV170104870
CEAZ01051495
175882
Actinomycetota
TGG
Pro
>WENV170104973
CEAZ01057206
175882
Actinomycetota
TGG
Pro
>WENV170105012
CEAZ01058510
20209
Actinomycetota
GAG
Leu
>WENV170104097
CEAZ01020536
222475
Actinomycetota
CTT
Lys
>WENV170104393
CEAZ01031310
480319
Actinomycetota
TTG
Gln
>WENV170104795
CEAZ01048654
480319
Actinomycetota
TTG
Gln
>WENV170104650
CEAZ01042699
280489
Actinomycetota
CTC
Glu
>WENV170104733
CEAZ01046124
280489
Actinomycetota
CTC
Glu
>WENV170103901
CEAZ01011408
280499
Actinomycetota
CCT
Arg
>WENV170105037
CEAZ01059014
280499
Actinomycetota
CCT
Arg
>WENV170103708
CEAZ01003396
398853
Actinomycetota
CTG
Gln
>WENV170104257
CEAZ01026623
398853
Actinomycetota
CTG
Gln
>WENV170104651
CEAZ01042699
398853
Actinomycetota
CTG
Gln
>WENV170104734
CEAZ01046124
398853
Actinomycetota
CTG
Gln
>WENV170104461
CEAZ01033885
176642
Actinomycetota
CAA
Leu
>WENV170103811
CEAZ01007664
175843
Actinomycetota
CAA
Leu
>WENV170104374
CEAZ01030665
175843
Actinomycetota
CAA
Leu
>WENV170104869
CEAZ01051495
175843
Actinomycetota
CAA
Leu
>WENV170104201
CEAZ01023925
203883
Actinomycetota
TCT
Arg
>WENV170104376
CEAZ01030835
56075
Actinomycetota
TGA
Ser
>WENV170104196
CEAZ01023925
46642
Actinomycetota
CGA
Ser
>WENV170104658
CEAZ01043122
46642
Actinomycetota
CGA
Ser
>WENV170104388
CEAZ01031297
104211
Actinomycetota
CAG
Leu
>WENV170104742
CEAZ01046124
104211
Actinomycetota
CAG
Leu
>WENV170104407
CEAZ01032332
117903
Actinomycetota
GTA
Tyr
>WENV170104603
CEAZ01041425
117903
Actinomycetota
GTA
Tyr
>WENV170104739
CEAZ01046124
117903
Actinomycetota
GTA
Tyr
>WENV170104100
CEAZ01020588
179238
Actinomycetota
GAT
Ile
>WENV170104743
CEAZ01046124
147796
Actinomycetota
TAA
Leu
>WENV170103974
CEAZ01014429
506175
Actinomycetota
TTG
Gln
>WENV170104430
CEAZ01032964
506175
Actinomycetota
TTG
Gln
>WENV170104735
CEAZ01046124
280470
Actinomycetota
CGT
Thr
>WENV170105201
CEAZ01065621
280470
Actinomycetota
CGT
Thr
>WENV170105141
CEAZ01062823
480376
Actinomycetota
CCC
Gly
>WENV170103940
CEAZ01012470
176162
Actinomycetota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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