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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180903512
ODOX01000587
147158
Actinomycetota
TTT
Lys
>WENV180903549
ODOX01008646
235605
Actinomycetota
CGT
Thr
>WENV180903502
ODOX01000316
147155
Actinomycetota
GTC
Asp
>WENV180903520
ODOX01001199
237816
Actinomycetota
GGT
Thr
>WENV180903529
ODOX01001582
147157
Actinomycetota
TAC
Val
>WENV180903534
ODOX01002415
339641
Actinomycetota
GAC
Val
>WENV180903499
ODOX01000143
415620
Actinomycetota
TCC
Gly
>WENV180903538
ODOX01002917
237815
Actinomycetota
CTT
Lys
>WENV180903531
ODOX01001721
237808
Actinomycetota
TGC
Ala
>WENV180903527
ODOX01001408
80899
Actinomycetota
CAG
Leu
>WENV180903503
ODOX01000316
147156
Actinomycetota
GAA
Phe
>WENV180903521
ODOX01001199
338489
Actinomycetota
CAT
Met
>WENV180903501
ODOX01000219
237803
Actinomycetota
CGT
Thr
>WENV180903526
ODOX01001403
237812
Actinomycetota
CTC
Glu
>WENV180903498
ODOX01000063
45149
Actinomycetota
CGA
Ser
>WENV180903519
ODOX01001199
96033
Actinomycetota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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