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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181892146
OGXP01000421
235146
Actinomycetota
CGT
Thr
>WENV181892149
OGXP01000424
235347
Actinomycetota
GGC
Ala
>WENV181892075
OGXP01000316
235153
Actinomycetota
CCT
Arg
>WENV181891763
OGXP01000011
201717
Actinomycetota
CTT
Lys
>WENV181891984
OGXP01000186
144600
Actinomycetota
TGG
Pro
>WENV181891883
OGXP01000073
235194
Actinomycetota
GTG
His
>WENV181892095
OGXP01000357
158720
Actinomycetota
ACG
Arg
>WENV181892047
OGXP01000254
245301
Actinomycetota
GCC
Gly
>WENV181892046
OGXP01000254
245301
Actinomycetota
GCC
Gly
>WENV181892044
OGXP01000254
245301
Actinomycetota
GCC
Gly
>WENV181891977
OGXP01000180
411601
Actinomycetota
CCC
Gly
>WENV181892250
OGXP01000704
144826
Actinomycetota
GGG
Pro
>WENV181891739
OGXP01000005
23370
Actinomycetota
GCT
Ser
>WENV181891979
OGXP01000183
174149
Actinomycetota
GAT
Ile
>WENV181891735
OGXP01000005
338239
Actinomycetota
TTC
Glu
>WENV181891980
OGXP01000183
235174
Actinomycetota
TGC
Ala
>WENV181891982
OGXP01000186
121510
Actinomycetota
TAA
Leu
>WENV181892215
OGXP01000575
356045
Actinomycetota
GAC
Val
>WENV181891968
OGXP01000160
153948
Actinomycetota
GGG
Pro
>WENV181891963
OGXP01000159
150473
Actinomycetota
CTC
Glu
>WENV181891962
OGXP01000159
150473
Actinomycetota
CTC
Glu
>WENV181891741
OGXP01000005
44855
Actinomycetota
TGA
Ser
>WENV181892216
OGXP01000575
235199
Actinomycetota
CAC
Val
>WENV181891740
OGXP01000005
44862
Actinomycetota
CGA
Ser
>WENV181892144
OGXP01000421
313386
Actinomycetota
CGT
Thr
>WENV181891761
OGXP01000011
367535
Actinomycetota
CTG
Gln
>WENV181892148
OGXP01000424
413665
Actinomycetota
TTG
Gln
>WENV181891764
OGXP01000011
254857
Actinomycetota
CCG
Arg
>WENV181891738
OGXP01000005
144700
Actinomycetota
CAT
Met
>WENV181892143
OGXP01000415
144636
Actinomycetota
GAT
Ile
>WENV181892141
OGXP01000415
144636
Actinomycetota
GAT
Ile
>WENV181891760
OGXP01000011
295695
Actinomycetota
CTC
Glu
>WENV181892502
OGXP01002299
235148
Actinomycetota
GTT
Asn
>WENV181891759
OGXP01000011
53078
Actinomycetota
GGA
Ser
>WENV181891744
OGXP01000005
144825
Actinomycetota
CAT
Met
>WENV181892134
OGXP01000403
338139
Actinomycetota
GTT
Asn
>WENV181892133
OGXP01000403
338139
Actinomycetota
GTT
Asn
>WENV181891745
OGXP01000005
235348
Actinomycetota
CCT
Arg
>WENV181892145
OGXP01000421
113601
Actinomycetota
TAG
Leu
>WENV181891983
OGXP01000186
144595
Actinomycetota
CAA
Leu
>WENV181891786
OGXP01000023
414234
Actinomycetota
CTG
Gln
>WENV181891978
OGXP01000180
80622
Actinomycetota
CAG
Leu
>WENV181891861
OGXP01000059
16222
Actinomycetota
GAG
Leu
>WENV181891974
OGXP01000173
158513
Actinomycetota
TGG
Pro
>WENV181892045
OGXP01000254
412834
Actinomycetota
GCA
Cys
>WENV181892503
OGXP01002299
243162
Actinomycetota
GTT
Asn
>WENV181891859
OGXP01000056
144660
Actinomycetota
TAC
Val
>WENV181891737
OGXP01000005
95593
Actinomycetota
>WENV181891884
OGXP01000073
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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