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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170132914
CENT01170027
186414
Alphaproteobacteria
CAT
Met
>WENV170131705
CENT01001412
424450
Alphaproteobacteria
GGT
Thr
>WENV170132704
CENT01096977
140876
Alphaproteobacteria
>WENV170132772
CENT01118661
320067
Alphaproteobacteria
CGC
Ala
>WENV170132421
CENT01069227
282966
Alphaproteobacteria
TTT
Lys
>WENV170131783
CENT01006981
201940
Alphaproteobacteria
CAT
Met
>WENV170131752
CENT01004628
197241
Alphaproteobacteria
GGG
Pro
>WENV170132668
CENT01094974
197241
Alphaproteobacteria
GGG
Pro
>WENV170131734
CENT01003037
193088
Alphaproteobacteria
GAT
Ile
>WENV170131776
CENT01006509
75222
Alphaproteobacteria
GAG
Leu
>WENV170132358
CENT01062591
75222
Alphaproteobacteria
GAG
Leu
>WENV170132831
CENT01141097
400223
Alphaproteobacteria
GGT
Thr
>WENV170131721
CENT01002288
179941
Alphaproteobacteria
CAT
Met
>WENV170132652
CENT01093449
178509
Alphaproteobacteria
CCT
Arg
>WENV170132527
CENT01079781
283510
Alphaproteobacteria
TTT
Lys
>WENV170132190
CENT01045292
400544
Alphaproteobacteria
GGT
Thr
>WENV170132284
CENT01055140
281650
Alphaproteobacteria
CCA
Trp
>WENV170132107
CENT01037426
212319
Alphaproteobacteria
GTG
His
>WENV170132609
CENT01089353
212319
Alphaproteobacteria
GTG
His
>WENV170131986
CENT01024440
398994
Alphaproteobacteria
GTT
Asn
>WENV170132244
CENT01051099
415537
Alphaproteobacteria
>WENV170132653
CENT01093480
353624
Alphaproteobacteria
CCA
Trp
>WENV170132393
CENT01066223
121990
Alphaproteobacteria
TAG
Leu
>WENV170132570
CENT01085156
35980
Alphaproteobacteria
CGA
Ser
>WENV170132114
CENT01038707
195438
Alphaproteobacteria
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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