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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
18 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170207042
CEPU01036464
178510
Alphaproteobacteria
ACG
Arg
>WENV170207319
CEPU01068672
179894
Alphaproteobacteria
CCG
Arg
>WENV170207650
CEPU01108815
404592
Alphaproteobacteria
GGT
Thr
>WENV170206665
CEPU01000165
140963
Alphaproteobacteria
>WENV170208197
CEPU01196187
20437
Alphaproteobacteria
GGA
Ser
>WENV170206964
CEPU01028711
201940
Alphaproteobacteria
CAT
Met
>WENV170207194
CEPU01053089
290043
Alphaproteobacteria
TGC
Ala
>WENV170207507
CEPU01092286
193088
Alphaproteobacteria
GAT
Ile
>WENV170207663
CEPU01110842
487436
Alphaproteobacteria
TCC
Gly
>WENV170206726
CEPU01005684
281659
Alphaproteobacteria
TGC
Ala
>WENV170206844
CEPU01016636
29702
Alphaproteobacteria
GGA
Ser
>WENV170207683
CEPU01113024
400544
Alphaproteobacteria
GGT
Thr
>WENV170207930
CEPU01136821
400544
Alphaproteobacteria
GGT
Thr
>WENV170206979
CEPU01029717
118213
Alphaproteobacteria
TAG
Leu
>WENV170207112
CEPU01043825
212319
Alphaproteobacteria
GTG
His
>WENV170207152
CEPU01047901
212319
Alphaproteobacteria
GTG
His
>WENV170206995
CEPU01031501
488318
Alphaproteobacteria
TCC
Gly
>WENV170207117
CEPU01044164
398994
Alphaproteobacteria
GTT
Asn
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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