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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
7 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV180384418
OBOX01045981
267922
Alphaproteobacteria
CCA
Trp
>WENV180384253
OBOX01001957
113700
Alphaproteobacteria
>WENV180384320
OBOX01011684
254188
Alphaproteobacteria
CCA
Trp
>WENV180384335
OBOX01014635
23672
Alphaproteobacteria
GCT
Ser
>WENV180384332
OBOX01014004
154227
Alphaproteobacteria
CAT
Met
>WENV180384362
OBOX01022337
412424
Alphaproteobacteria
TCC
Gly
>WENV180384358
OBOX01020041
147088
Alphaproteobacteria
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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