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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV078904
AAQL01006505
290391
Bacillota
TAC
Val
>WENV078923
AAQL01007772
290391
Bacillota
TAC
Val
>WENV079017
AAQL01011438
290391
Bacillota
TAC
Val
>WENV079027
AAQL01011501
290391
Bacillota
TAC
Val
>WENV079003
AAQL01010886
280428
Bacillota
GAA
Phe
>WENV078948
AAQL01008276
291579
Bacillota
GAA
Phe
>WENV079057
AAQL01011784
291579
Bacillota
GAA
Phe
>WENV078949
AAQL01008276
179917
Bacillota
CAT
Met
>WENV079056
AAQL01011784
179917
Bacillota
CAT
Met
>WENV078937
AAQL01007880
184116
Bacillota
TCT
Arg
>WENV078817
AAQL01001370
184497
Bacillota
GGG
Pro
>WENV079035
AAQL01011552
194260
Bacillota
GAT
Ile
>WENV078840
AAQL01002523
284723
Bacillota
TAC
Val
>WENV078906
AAQL01006562
481217
Bacillota
GCA
Cys
>WENV078952
AAQL01008276
294020
Bacillota
TAC
Val
>WENV079021
AAQL01011497
287280
Bacillota
TGT
Thr
>WENV079028
AAQL01011501
180688
Bacillota
GTC
Asp
>WENV079039
AAQL01011575
175899
Bacillota
GTC
Asp
>WENV078995
AAQL01010366
303718
Bacillota
TGT
Thr
>WENV079042
AAQL01011575
117745
Bacillota
GTA
Tyr
>WENV078838
AAQL01002434
291597
Bacillota
TGC
Ala
>WENV078863
AAQL01004188
291597
Bacillota
TGC
Ala
>WENV078945
AAQL01008131
291597
Bacillota
TGC
Ala
>WENV079049
AAQL01011600
291597
Bacillota
TGC
Ala
>WENV078969
AAQL01009002
46643
Bacillota
TGA
Ser
>WENV078812
AAQL01000549
58120
Bacillota
AAG
Leu
>WENV078872
AAQL01004592
58120
Bacillota
AAG
Leu
>WENV078831
AAQL01002157
46835
Bacillota
TAA
Leu
>WENV078832
AAQL01002157
175915
Bacillota
GTC
Asp
>WENV078903
AAQL01006505
175915
Bacillota
GTC
Asp
>WENV078922
AAQL01007772
175915
Bacillota
GTC
Asp
>WENV078953
AAQL01008276
175915
Bacillota
GTC
Asp
>WENV078927
AAQL01007772
280476
Bacillota
TTT
Lys
>WENV079044
AAQL01011575
280462
Bacillota
GAA
Phe
>WENV078982
AAQL01009374
398852
Bacillota
CTC
Glu
>WENV079058
AAQL01011784
309916
Bacillota
TTT
Lys
>WENV078951
AAQL01008276
118359
Bacillota
GTA
Tyr
>WENV078823
AAQL01001781
280483
Bacillota
GAA
Phe
>WENV078822
AAQL01001781
285756
Bacillota
GCC
Gly
>WENV079026
AAQL01011501
285556
Bacillota
TGT
Thr
>WENV079045
AAQL01011575
280463
Bacillota
TTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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