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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV085676
BABD01005360
99852
Bacillota
GTA
Tyr
>WENV085609
BABD01002180
280428
Bacillota
GAA
Phe
>WENV085590
BABD01001592
280492
Bacillota
CTT
Lys
>WENV085630
BABD01003115
280492
Bacillota
CTT
Lys
>WENV085654
BABD01003866
179563
Bacillota
GAT
Ile
>WENV085876
BABD01024301
179563
Bacillota
GAT
Ile
>WENV085653
BABD01003866
295166
Bacillota
TGC
Ala
>WENV085812
BABD01015560
190476
Bacillota
CAT
Met
>WENV085828
BABD01018074
5692
Bacillota
GCT
Ser
>WENV085691
BABD01006366
175825
Bacillota
GAT
Ile
>WENV085767
BABD01010209
175825
Bacillota
GAT
Ile
>WENV085932
BABD01035819
189473
Bacillota
GAT
Ile
>WENV085729
BABD01008973
175859
Bacillota
TCT
Arg
>WENV085692
BABD01006366
280436
Bacillota
TGC
Ala
>WENV085766
BABD01010209
280436
Bacillota
TGC
Ala
>WENV085769
BABD01010432
290325
Bacillota
GCC
Gly
>WENV085605
BABD01002067
175831
Bacillota
ACG
Arg
>WENV085765
BABD01010126
175868
Bacillota
GTT
Asn
>WENV085523
BABD01000488
322848
Bacillota
CTT
Lys
>WENV085563
BABD01000827
322848
Bacillota
CTT
Lys
>WENV085522
BABD01000488
398854
Bacillota
CTC
Glu
>WENV085915
BABD01032810
398854
Bacillota
CTC
Glu
>WENV085685
BABD01005669
56079
Bacillota
AAG
Leu
>WENV085535
BABD01000578
117745
Bacillota
GTA
Tyr
>WENV085571
BABD01001008
117745
Bacillota
GTA
Tyr
>WENV085580
BABD01001344
179755
Bacillota
CCG
Arg
>WENV085711
BABD01007524
401111
Bacillota
TTC
Glu
>WENV085811
BABD01015560
398832
Bacillota
TTC
Glu
>WENV085799
BABD01014344
118669
Bacillota
GTA
Tyr
>WENV085948
BABD01036832
118669
Bacillota
GTA
Tyr
>WENV085865
BABD01021947
294275
Bacillota
TGC
Ala
>WENV085533
BABD01000578
280462
Bacillota
GAA
Phe
>WENV085944
BABD01036269
201856
Bacillota
GAT
Ile
>WENV085632
BABD01003199
321248
Bacillota
TAC
Val
>WENV085737
BABD01009285
285756
Bacillota
GCC
Gly
>WENV085532
BABD01000578
280463
Bacillota
TTT
Lys
>WENV085827
BABD01018074
56074
Bacillota
TGA
Ser
>WENV085931
BABD01035588
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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