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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170040973
CDYS01055418
99852
Bacillota
GTA
Tyr
>WENV170040032
CDYS01014649
280500
Bacillota
TGC
Ala
>WENV170040841
CDYS01049481
280500
Bacillota
TGC
Ala
>WENV170041014
CDYS01057311
280500
Bacillota
TGC
Ala
>WENV170040471
CDYS01032822
280428
Bacillota
GAA
Phe
>WENV170041039
CDYS01058309
280428
Bacillota
GAA
Phe
>WENV170039880
CDYS01008070
280492
Bacillota
CTT
Lys
>WENV170040040
CDYS01015178
175842
Bacillota
CAC
Val
>WENV170039970
CDYS01012260
73664
Bacillota
CAG
Leu
>WENV170039890
CDYS01008519
280447
Bacillota
GAC
Val
>WENV170040340
CDYS01028362
280447
Bacillota
GAC
Val
>WENV170040401
CDYS01030638
5692
Bacillota
GCT
Ser
>WENV170040325
CDYS01027370
284723
Bacillota
TAC
Val
>WENV170040062
CDYS01016502
73009
Bacillota
CAG
Leu
>WENV170040147
CDYS01020327
73009
Bacillota
CAG
Leu
>WENV170041013
CDYS01057310
291581
Bacillota
CGG
Pro
>WENV170040406
CDYS01030654
175859
Bacillota
TCT
Arg
>WENV170039878
CDYS01008052
175831
Bacillota
ACG
Arg
>WENV170040423
CDYS01031135
179810
Bacillota
TCT
Arg
>WENV170040976
CDYS01055451
480322
Bacillota
CTG
Gln
>WENV170041012
CDYS01057310
480322
Bacillota
CTG
Gln
>WENV170040999
CDYS01056848
175868
Bacillota
GTT
Asn
>WENV170041035
CDYS01058188
175868
Bacillota
GTT
Asn
>WENV170039908
CDYS01009448
322848
Bacillota
CTT
Lys
>WENV170040644
CDYS01040151
322848
Bacillota
CTT
Lys
>WENV170040998
CDYS01056848
398854
Bacillota
CTC
Glu
>WENV170040413
CDYS01030751
291576
Bacillota
CCC
Gly
>WENV170041037
CDYS01058308
480324
Bacillota
TTG
Gln
>WENV170039742
CDYS01001841
303718
Bacillota
TGT
Thr
>WENV170040263
CDYS01024802
303718
Bacillota
TGT
Thr
>WENV170040585
CDYS01037744
323864
Bacillota
TGC
Ala
>WENV170040374
CDYS01030056
117745
Bacillota
GTA
Tyr
>WENV170040436
CDYS01031624
280444
Bacillota
GGT
Thr
>WENV170040635
CDYS01039677
280444
Bacillota
GGT
Thr
>WENV170040472
CDYS01032822
321753
Bacillota
GCC
Gly
>WENV170040903
CDYS01052179
179755
Bacillota
CCG
Arg
>WENV170040029
CDYS01014226
398832
Bacillota
TTC
Glu
>WENV170040039
CDYS01014976
398852
Bacillota
CTC
Glu
>WENV170040778
CDYS01046839
398852
Bacillota
CTC
Glu
>WENV170040435
CDYS01031624
175849
Bacillota
GTC
Asp
>WENV170040021
CDYS01014196
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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