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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
133 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170081007
CDZY01000416
510477
Bacillota
TCC
Gly
>WENV170081248
CDZY01010254
280500
Bacillota
TGC
Ala
>WENV170081681
CDZY01024171
280500
Bacillota
TGC
Ala
>WENV170081795
CDZY01028626
280500
Bacillota
TGC
Ala
>WENV170082049
CDZY01036826
280500
Bacillota
TGC
Ala
>WENV170082528
CDZY01057255
280500
Bacillota
TGC
Ala
>WENV170081073
CDZY01003311
349107
Bacillota
GCC
Gly
>WENV170081095
CDZY01003727
349107
Bacillota
GCC
Gly
>WENV170081108
CDZY01004995
349107
Bacillota
GCC
Gly
>WENV170082392
CDZY01052450
349107
Bacillota
GCC
Gly
>WENV170081219
CDZY01009372
405363
Bacillota
GCA
Cys
>WENV170081965
CDZY01033594
184537
Bacillota
ACG
Arg
>WENV170081072
CDZY01003311
280428
Bacillota
GAA
Phe
>WENV170081094
CDZY01003727
280428
Bacillota
GAA
Phe
>WENV170081295
CDZY01011348
179917
Bacillota
CAT
Met
>WENV170081468
CDZY01017274
179917
Bacillota
CAT
Met
>WENV170082045
CDZY01036736
296855
Bacillota
GGT
Thr
>WENV170081296
CDZY01011348
302145
Bacillota
GAA
Phe
>WENV170081109
CDZY01004995
280466
Bacillota
TAC
Val
>WENV170081454
CDZY01016402
280492
Bacillota
CTT
Lys
>WENV170082159
CDZY01041724
280492
Bacillota
CTT
Lys
>WENV170081037
CDZY01001880
175842
Bacillota
CAC
Val
>WENV170081138
CDZY01006023
175842
Bacillota
CAC
Val
>WENV170081875
CDZY01032190
175842
Bacillota
CAC
Val
>WENV170081963
CDZY01033546
175842
Bacillota
CAC
Val
>WENV170082446
CDZY01053769
236579
Bacillota
GAT
Ile
>WENV170081752
CDZY01026802
20932
Bacillota
GCT
Ser
>WENV170082389
CDZY01052379
291553
Bacillota
GAA
Phe
>WENV170081486
CDZY01017745
295166
Bacillota
TGC
Ala
>WENV170082445
CDZY01053769
295166
Bacillota
TGC
Ala
>WENV170082193
CDZY01043535
190476
Bacillota
CAT
Met
>WENV170081985
CDZY01034872
482593
Bacillota
CCC
Gly
>WENV170082191
CDZY01043481
482593
Bacillota
CCC
Gly
>WENV170082312
CDZY01048369
73664
Bacillota
CAG
Leu
>WENV170081386
CDZY01014245
280447
Bacillota
GAC
Val
>WENV170081912
CDZY01032824
280447
Bacillota
GAC
Val
>WENV170082236
CDZY01045276
280447
Bacillota
GAC
Val
>WENV170082356
CDZY01050886
5692
Bacillota
GCT
Ser
>WENV170081408
CDZY01014695
186123
Bacillota
GTC
Asp
>WENV170081540
CDZY01019190
186123
Bacillota
GTC
Asp
>WENV170081732
CDZY01026290
186123
Bacillota
GTC
Asp
>WENV170081261
CDZY01010869
284723
Bacillota
TAC
Val
>WENV170081307
CDZY01011350
284723
Bacillota
TAC
Val
>WENV170081465
CDZY01017274
284723
Bacillota
TAC
Val
>WENV170081791
CDZY01028626
284723
Bacillota
TAC
Val
>WENV170081927
CDZY01033103
284723
Bacillota
TAC
Val
>WENV170081943
CDZY01033108
284723
Bacillota
TAC
Val
>WENV170081196
CDZY01008371
73009
Bacillota
CAG
Leu
>WENV170081640
CDZY01023345
73009
Bacillota
CAG
Leu
>WENV170081682
CDZY01024182
73009
Bacillota
CAG
Leu
>WENV170082503
CDZY01056313
189473
Bacillota
GAT
Ile
>WENV170082102
CDZY01038861
407726
Bacillota
CTG
Gln
>WENV170082398
CDZY01052760
291581
Bacillota
CGG
Pro
>WENV170081063
CDZY01002919
175859
Bacillota
TCT
Arg
>WENV170081282
CDZY01011315
175859
Bacillota
TCT
Arg
>WENV170082522
CDZY01056937
175859
Bacillota
TCT
Arg
>WENV170081021
CDZY01000957
290325
Bacillota
GCC
Gly
>WENV170082444
CDZY01053698
175831
Bacillota
ACG
Arg
>WENV170082046
CDZY01036736
184495
Bacillota
CAT
Met
>WENV170081701
CDZY01025030
179810
Bacillota
TCT
Arg
>WENV170082348
CDZY01050042
284627
Bacillota
GAA
Phe
>WENV170081409
CDZY01014695
291634
Bacillota
GAA
Phe
>WENV170081733
CDZY01026290
291634
Bacillota
GAA
Phe
>WENV170081410
CDZY01014695
346451
Bacillota
TTT
Lys
>WENV170081247
CDZY01010254
175916
Bacillota
GAT
Ile
>WENV170082048
CDZY01036826
175916
Bacillota
GAT
Ile
>WENV170082527
CDZY01057255
175916
Bacillota
GAT
Ile
>WENV170081512
CDZY01018435
480322
Bacillota
CTG
Gln
>WENV170082178
CDZY01042560
480322
Bacillota
CTG
Gln
>WENV170082261
CDZY01045693
480322
Bacillota
CTG
Gln
>WENV170082397
CDZY01052760
480322
Bacillota
CTG
Gln
>WENV170082349
CDZY01050145
175868
Bacillota
GTT
Asn
>WENV170081374
CDZY01013731
289716
Bacillota
GTG
His
>WENV170082427
CDZY01053047
398854
Bacillota
CTC
Glu
>WENV170081089
CDZY01003408
291576
Bacillota
CCC
Gly
>WENV170081464
CDZY01017171
291576
Bacillota
CCC
Gly
>WENV170081218
CDZY01009372
480324
Bacillota
TTG
Gln
>WENV170081683
CDZY01024186
480324
Bacillota
TTG
Gln
>WENV170082500
CDZY01056237
480324
Bacillota
TTG
Gln
>WENV170082420
CDZY01052882
497729
Bacillota
CCA
Trp
>WENV170082429
CDZY01053341
497729
Bacillota
CCA
Trp
>WENV170081695
CDZY01025030
175899
Bacillota
GTC
Asp
>WENV170082089
CDZY01037785
303718
Bacillota
TGT
Thr
>WENV170081967
CDZY01033605
56079
Bacillota
AAG
Leu
>WENV170081623
CDZY01022370
480337
Bacillota
TCC
Gly
>WENV170081835
CDZY01030260
186051
Bacillota
GAT
Ile
>WENV170082365
CDZY01051388
117745
Bacillota
GTA
Tyr
>WENV170081092
CDZY01003690
280444
Bacillota
GGT
Thr
>WENV170081223
CDZY01009439
280444
Bacillota
GGT
Thr
>WENV170082065
CDZY01037321
280444
Bacillota
GGT
Thr
>WENV170082086
CDZY01037729
280444
Bacillota
GGT
Thr
>WENV170081966
CDZY01033594
119459
Bacillota
TAG
Leu
>WENV170082295
CDZY01047165
342104
Bacillota
TAC
Val
>WENV170081514
CDZY01018614
223045
Bacillota
GAT
Ile
>WENV170081655
CDZY01023355
179755
Bacillota
CCG
Arg
>WENV170081862
CDZY01031237
179755
Bacillota
CCG
Arg
>WENV170082020
CDZY01035886
280547
Bacillota
GTC
Asp
>WENV170082388
CDZY01052379
280547
Bacillota
GTC
Asp
>WENV170082042
CDZY01036670
445407
Bacillota
GCC
Gly
>WENV170082390
CDZY01052379
445407
Bacillota
GCC
Gly
>WENV170081654
CDZY01023355
398832
Bacillota
TTC
Glu
>WENV170082194
CDZY01043535
398832
Bacillota
TTC
Glu
>WENV170081476
CDZY01017571
25955
Bacillota
GCT
Ser
>WENV170081824
CDZY01029472
118669
Bacillota
GTA
Tyr
>WENV170082386
CDZY01052240
118669
Bacillota
GTA
Tyr
>WENV170081325
CDZY01011767
289715
Bacillota
TAC
Val
>WENV170081041
CDZY01001903
280462
Bacillota
GAA
Phe
>WENV170081329
CDZY01011848
398852
Bacillota
CTC
Glu
>WENV170081628
CDZY01022693
398852
Bacillota
CTC
Glu
>WENV170081631
CDZY01022874
398852
Bacillota
CTC
Glu
>WENV170082366
CDZY01051388
398852
Bacillota
CTC
Glu
>WENV170082515
CDZY01056743
398852
Bacillota
CTC
Glu
>WENV170082516
CDZY01056743
398852
Bacillota
CTC
Glu
>WENV170082517
CDZY01056743
398852
Bacillota
CTC
Glu
>WENV170081375
CDZY01013755
289123
Bacillota
GGT
Thr
>WENV170081432
CDZY01015532
289123
Bacillota
GGT
Thr
>WENV170082104
CDZY01038873
289123
Bacillota
GGT
Thr
>WENV170082452
CDZY01053837
289123
Bacillota
GGT
Thr
>WENV170081622
CDZY01022370
208539
Bacillota
TGG
Pro
>WENV170081008
CDZY01000416
184539
Bacillota
TCT
Arg
>WENV170081624
CDZY01022370
184539
Bacillota
TCT
Arg
>WENV170081398
CDZY01014316
175857
Bacillota
GTG
His
>WENV170081015
CDZY01000623
398833
Bacillota
TGT
Thr
>WENV170081071
CDZY01003311
175849
Bacillota
GTC
Asp
>WENV170081091
CDZY01003690
175849
Bacillota
GTC
Asp
>WENV170081110
CDZY01004995
175849
Bacillota
GTC
Asp
>WENV170081222
CDZY01009439
175849
Bacillota
GTC
Asp
>WENV170081541
CDZY01019190
405393
Bacillota
GCC
Gly
>WENV170081734
CDZY01026290
405393
Bacillota
GCC
Gly
>WENV170082097
CDZY01038329
405393
Bacillota
GCC
Gly
>WENV170081068
CDZY01003099
56074
Bacillota
TGA
Ser
>WENV170082355
CDZY01050886
56074
Bacillota
TGA
Ser
>WENV170081434
CDZY01015590
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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