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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
96 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170087404
CEAD01001886
510477
Bacillota
TCC
Gly
>WENV170087390
CEAD01001261
99852
Bacillota
GTA
Tyr
>WENV170088001
CEAD01030744
99852
Bacillota
GTA
Tyr
>WENV170087592
CEAD01010298
343590
Bacillota
GCC
Gly
>WENV170088019
CEAD01031193
343590
Bacillota
GCC
Gly
>WENV170087730
CEAD01018142
280500
Bacillota
TGC
Ala
>WENV170087758
CEAD01019410
349107
Bacillota
GCC
Gly
>WENV170087999
CEAD01030744
349107
Bacillota
GCC
Gly
>WENV170088115
CEAD01035903
349107
Bacillota
GCC
Gly
>WENV170088189
CEAD01038659
349107
Bacillota
GCC
Gly
>WENV170088000
CEAD01030744
405363
Bacillota
GCA
Cys
>WENV170088190
CEAD01038659
405363
Bacillota
GCA
Cys
>WENV170088114
CEAD01035903
280428
Bacillota
GAA
Phe
>WENV170087559
CEAD01008789
175842
Bacillota
CAC
Val
>WENV170087652
CEAD01013795
175842
Bacillota
CAC
Val
>WENV170087718
CEAD01016666
175842
Bacillota
CAC
Val
>WENV170088030
CEAD01031837
291629
Bacillota
CCA
Trp
>WENV170087397
CEAD01001333
190476
Bacillota
CAT
Met
>WENV170087548
CEAD01007980
190476
Bacillota
CAT
Met
>WENV170087641
CEAD01013390
190476
Bacillota
CAT
Met
>WENV170087863
CEAD01024460
190476
Bacillota
CAT
Met
>WENV170087556
CEAD01008086
280447
Bacillota
GAC
Val
>WENV170087658
CEAD01014069
280447
Bacillota
GAC
Val
>WENV170087854
CEAD01023605
280447
Bacillota
GAC
Val
>WENV170087868
CEAD01024734
280447
Bacillota
GAC
Val
>WENV170088191
CEAD01038660
280447
Bacillota
GAC
Val
>WENV170087674
CEAD01015310
5692
Bacillota
GCT
Ser
>WENV170087901
CEAD01025919
5692
Bacillota
GCT
Ser
>WENV170087440
CEAD01003604
186123
Bacillota
GTC
Asp
>WENV170087553
CEAD01008025
175825
Bacillota
GAT
Ile
>WENV170087415
CEAD01002301
73009
Bacillota
CAG
Leu
>WENV170087417
CEAD01002311
73009
Bacillota
CAG
Leu
>WENV170087377
CEAD01000350
291581
Bacillota
CGG
Pro
>WENV170087965
CEAD01029051
291581
Bacillota
CGG
Pro
>WENV170087498
CEAD01005754
175859
Bacillota
TCT
Arg
>WENV170087615
CEAD01011569
175859
Bacillota
TCT
Arg
>WENV170087552
CEAD01008025
280436
Bacillota
TGC
Ala
>WENV170087574
CEAD01009352
175831
Bacillota
ACG
Arg
>WENV170087617
CEAD01011572
175831
Bacillota
ACG
Arg
>WENV170087930
CEAD01027332
175831
Bacillota
ACG
Arg
>WENV170088021
CEAD01031382
175831
Bacillota
ACG
Arg
>WENV170087506
CEAD01006279
332181
Bacillota
TGT
Thr
>WENV170087441
CEAD01003604
291634
Bacillota
GAA
Phe
>WENV170088164
CEAD01037814
291634
Bacillota
GAA
Phe
>WENV170087675
CEAD01015315
346451
Bacillota
TTT
Lys
>WENV170087376
CEAD01000350
480322
Bacillota
CTG
Gln
>WENV170087573
CEAD01009311
480322
Bacillota
CTG
Gln
>WENV170087575
CEAD01009465
480322
Bacillota
CTG
Gln
>WENV170087919
CEAD01026798
480322
Bacillota
CTG
Gln
>WENV170087964
CEAD01029051
480322
Bacillota
CTG
Gln
>WENV170087988
CEAD01030075
480322
Bacillota
CTG
Gln
>WENV170087456
CEAD01004144
175868
Bacillota
GTT
Asn
>WENV170087770
CEAD01019923
175868
Bacillota
GTT
Asn
>WENV170087939
CEAD01027754
175868
Bacillota
GTT
Asn
>WENV170087978
CEAD01029541
175868
Bacillota
GTT
Asn
>WENV170087497
CEAD01005543
398854
Bacillota
CTC
Glu
>WENV170087769
CEAD01019923
398854
Bacillota
CTC
Glu
>WENV170088036
CEAD01032349
398854
Bacillota
CTC
Glu
>WENV170088077
CEAD01034352
398854
Bacillota
CTC
Glu
>WENV170087659
CEAD01014192
291576
Bacillota
CCC
Gly
>WENV170088167
CEAD01037967
291576
Bacillota
CCC
Gly
>WENV170087547
CEAD01007849
480324
Bacillota
TTG
Gln
>WENV170087869
CEAD01024758
480324
Bacillota
TTG
Gln
>WENV170087941
CEAD01028225
480324
Bacillota
TTG
Gln
>WENV170087942
CEAD01028244
480324
Bacillota
TTG
Gln
>WENV170088066
CEAD01033583
497729
Bacillota
CCA
Trp
>WENV170087451
CEAD01003925
175911
Bacillota
GTC
Asp
>WENV170087967
CEAD01029094
175911
Bacillota
GTC
Asp
>WENV170087395
CEAD01001305
398857
Bacillota
TTC
Glu
>WENV170087646
CEAD01013672
280444
Bacillota
GGT
Thr
>WENV170087647
CEAD01013672
280444
Bacillota
GGT
Thr
>WENV170087780
CEAD01020149
280444
Bacillota
GGT
Thr
>WENV170087781
CEAD01020259
280444
Bacillota
GGT
Thr
>WENV170087782
CEAD01020259
280444
Bacillota
GGT
Thr
>WENV170087790
CEAD01020541
280444
Bacillota
GGT
Thr
>WENV170087883
CEAD01025121
280444
Bacillota
GGT
Thr
>WENV170088142
CEAD01037078
280444
Bacillota
GGT
Thr
>WENV170087398
CEAD01001333
398832
Bacillota
TTC
Glu
>WENV170087549
CEAD01007980
398832
Bacillota
TTC
Glu
>WENV170087864
CEAD01024460
398832
Bacillota
TTC
Glu
>WENV170087445
CEAD01003864
201856
Bacillota
GAT
Ile
>WENV170087542
CEAD01007536
398833
Bacillota
TGT
Thr
>WENV170087878
CEAD01024789
398833
Bacillota
TGT
Thr
>WENV170088024
CEAD01031671
398833
Bacillota
TGT
Thr
>WENV170087645
CEAD01013672
175849
Bacillota
GTC
Asp
>WENV170087779
CEAD01020149
175849
Bacillota
GTC
Asp
>WENV170087998
CEAD01030744
175849
Bacillota
GTC
Asp
>WENV170088113
CEAD01035903
175849
Bacillota
GTC
Asp
>WENV170088141
CEAD01037078
175849
Bacillota
GTC
Asp
>WENV170088029
CEAD01031837
405393
Bacillota
GCC
Gly
>WENV170087596
CEAD01010532
56074
Bacillota
TGA
Ser
>WENV170087829
CEAD01022466
56074
Bacillota
TGA
Ser
>WENV170087900
CEAD01025919
56074
Bacillota
TGA
Ser
>WENV170087689
CEAD01015659
280473
Bacillota
TGG
Pro
>WENV170087724
CEAD01017569
280473
Bacillota
TGG
Pro
>WENV170088200
CEAD01039090
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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