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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170088254
CEAE01000539
280500
Bacillota
TGC
Ala
>WENV170088836
CEAE01019826
291579
Bacillota
GAA
Phe
>WENV170088874
CEAE01021747
280492
Bacillota
CTT
Lys
>WENV170089195
CEAE01032633
280492
Bacillota
CTT
Lys
>WENV170088880
CEAE01021828
175842
Bacillota
CAC
Val
>WENV170088486
CEAE01007630
287289
Bacillota
GCC
Gly
>WENV170088964
CEAE01024812
287289
Bacillota
GCC
Gly
>WENV170088736
CEAE01016500
179176
Bacillota
ACG
Arg
>WENV170088673
CEAE01014032
215243
Bacillota
CAT
Met
>WENV170088942
CEAE01023871
215243
Bacillota
CAT
Met
>WENV170088980
CEAE01025147
215243
Bacillota
CAT
Met
>WENV170088555
CEAE01009558
190476
Bacillota
CAT
Met
>WENV170089097
CEAE01029852
190476
Bacillota
CAT
Met
>WENV170088525
CEAE01008741
284506
Bacillota
CCA
Trp
>WENV170088951
CEAE01024401
73664
Bacillota
CAG
Leu
>WENV170088304
CEAE01001702
280447
Bacillota
GAC
Val
>WENV170089156
CEAE01031560
280447
Bacillota
GAC
Val
>WENV170088436
CEAE01006556
175825
Bacillota
GAT
Ile
>WENV170088888
CEAE01022124
284723
Bacillota
TAC
Val
>WENV170088251
CEAE01000320
73009
Bacillota
CAG
Leu
>WENV170088317
CEAE01001737
73009
Bacillota
CAG
Leu
>WENV170088583
CEAE01010055
291581
Bacillota
CGG
Pro
>WENV170088892
CEAE01022128
175859
Bacillota
TCT
Arg
>WENV170088435
CEAE01006556
280436
Bacillota
TGC
Ala
>WENV170088727
CEAE01016158
175831
Bacillota
ACG
Arg
>WENV170088328
CEAE01002137
295350
Bacillota
TGC
Ala
>WENV170088582
CEAE01010055
480322
Bacillota
CTG
Gln
>WENV170088592
CEAE01010396
480322
Bacillota
CTG
Gln
>WENV170088295
CEAE01001426
175868
Bacillota
GTT
Asn
>WENV170088853
CEAE01020643
175868
Bacillota
GTT
Asn
>WENV170089031
CEAE01027277
175868
Bacillota
GTT
Asn
>WENV170089150
CEAE01031327
322848
Bacillota
CTT
Lys
>WENV170088294
CEAE01001426
398854
Bacillota
CTC
Glu
>WENV170089030
CEAE01027277
398854
Bacillota
CTC
Glu
>WENV170088265
CEAE01000645
291576
Bacillota
CCC
Gly
>WENV170088401
CEAE01004859
480324
Bacillota
TTG
Gln
>WENV170088370
CEAE01003538
497729
Bacillota
CCA
Trp
>WENV170088580
CEAE01009831
497729
Bacillota
CCA
Trp
>WENV170088920
CEAE01023100
497729
Bacillota
CCA
Trp
>WENV170088662
CEAE01013829
73638
Bacillota
AAG
Leu
>WENV170088289
CEAE01001352
56079
Bacillota
AAG
Leu
>WENV170088950
CEAE01024401
56079
Bacillota
AAG
Leu
>WENV170088830
CEAE01019721
323864
Bacillota
TGC
Ala
>WENV170088378
CEAE01004029
175911
Bacillota
GTC
Asp
>WENV170088568
CEAE01009738
175911
Bacillota
GTC
Asp
>WENV170088633
CEAE01012135
175911
Bacillota
GTC
Asp
>WENV170088962
CEAE01024812
175911
Bacillota
GTC
Asp
>WENV170088257
CEAE01000553
292374
Bacillota
TGC
Ala
>WENV170088562
CEAE01009738
292374
Bacillota
TGC
Ala
>WENV170088808
CEAE01019210
398857
Bacillota
TTC
Glu
>WENV170089083
CEAE01029548
117745
Bacillota
GTA
Tyr
>WENV170089165
CEAE01031846
280444
Bacillota
GGT
Thr
>WENV170089167
CEAE01031846
280444
Bacillota
GGT
Thr
>WENV170089020
CEAE01027242
291597
Bacillota
TGC
Ala
>WENV170088369
CEAE01003462
321753
Bacillota
GCC
Gly
>WENV170089099
CEAE01029852
179755
Bacillota
CCG
Arg
>WENV170088695
CEAE01014827
46835
Bacillota
TAA
Leu
>WENV170088556
CEAE01009558
398832
Bacillota
TTC
Glu
>WENV170089098
CEAE01029852
398832
Bacillota
TTC
Glu
>WENV170088886
CEAE01022077
280476
Bacillota
TTT
Lys
>WENV170089010
CEAE01026327
280476
Bacillota
TTT
Lys
>WENV170088553
CEAE01009472
280462
Bacillota
GAA
Phe
>WENV170088528
CEAE01008827
398852
Bacillota
CTC
Glu
>WENV170088550
CEAE01009468
398852
Bacillota
CTC
Glu
>WENV170088689
CEAE01014580
398852
Bacillota
CTC
Glu
>WENV170089084
CEAE01029548
398852
Bacillota
CTC
Glu
>WENV170088256
CEAE01000553
201856
Bacillota
GAT
Ile
>WENV170088561
CEAE01009738
201856
Bacillota
GAT
Ile
>WENV170088922
CEAE01023116
398833
Bacillota
TGT
Thr
>WENV170089166
CEAE01031846
175849
Bacillota
GTC
Asp
>WENV170088630
CEAE01012067
175849
Bacillota
GTC
Asp
>WENV170088883
CEAE01022077
179166
Bacillota
TCT
Arg
>WENV170088713
CEAE01015557
56074
Bacillota
TGA
Ser
>WENV170088682
CEAE01014296
280473
Bacillota
TGG
Pro
>WENV170088872
CEAE01021563
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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