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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170090452
CEAF01045506
510477
Bacillota
TCC
Gly
>WENV170091135
CEAF01072099
343590
Bacillota
GCC
Gly
>WENV170091136
CEAF01072099
343590
Bacillota
GCC
Gly
>WENV170090974
CEAF01066050
280500
Bacillota
TGC
Ala
>WENV170090761
CEAF01058359
229015
Bacillota
GTG
His
>WENV170089686
CEAF01015318
179917
Bacillota
CAT
Met
>WENV170090511
CEAF01048275
179917
Bacillota
CAT
Met
>WENV170090058
CEAF01029458
175842
Bacillota
CAC
Val
>WENV170090209
CEAF01035102
175842
Bacillota
CAC
Val
>WENV170090751
CEAF01058345
291629
Bacillota
CCA
Trp
>WENV170090951
CEAF01065478
236579
Bacillota
GAT
Ile
>WENV170089658
CEAF01014726
179176
Bacillota
ACG
Arg
>WENV170090950
CEAF01065478
295166
Bacillota
TGC
Ala
>WENV170090015
CEAF01027561
215243
Bacillota
CAT
Met
>WENV170089854
CEAF01021398
73664
Bacillota
CAG
Leu
>WENV170090585
CEAF01051147
73664
Bacillota
CAG
Leu
>WENV170090181
CEAF01033999
5692
Bacillota
GCT
Ser
>WENV170090428
CEAF01044332
312274
Bacillota
GGC
Ala
>WENV170090749
CEAF01058345
186123
Bacillota
GTC
Asp
>WENV170090752
CEAF01058345
186123
Bacillota
GTC
Asp
>WENV170089598
CEAF01012905
284723
Bacillota
TAC
Val
>WENV170089604
CEAF01013027
284723
Bacillota
TAC
Val
>WENV170089606
CEAF01013027
284723
Bacillota
TAC
Val
>WENV170089663
CEAF01015126
284723
Bacillota
TAC
Val
>WENV170089683
CEAF01015318
284723
Bacillota
TAC
Val
>WENV170089996
CEAF01026937
284723
Bacillota
TAC
Val
>WENV170090508
CEAF01048275
284723
Bacillota
TAC
Val
>WENV170089303
CEAF01002857
189473
Bacillota
GAT
Ile
>WENV170089622
CEAF01013724
407726
Bacillota
CTG
Gln
>WENV170090362
CEAF01041920
175859
Bacillota
TCT
Arg
>WENV170089532
CEAF01010142
290325
Bacillota
GCC
Gly
>WENV170089650
CEAF01014711
332181
Bacillota
TGT
Thr
>WENV170090128
CEAF01031225
179810
Bacillota
TCT
Arg
>WENV170090196
CEAF01034630
179810
Bacillota
TCT
Arg
>WENV170090760
CEAF01058359
179810
Bacillota
TCT
Arg
>WENV170089566
CEAF01011728
284627
Bacillota
GAA
Phe
>WENV170090753
CEAF01058345
291634
Bacillota
GAA
Phe
>WENV170090809
CEAF01059547
291634
Bacillota
GAA
Phe
>WENV170090232
CEAF01036861
346451
Bacillota
TTT
Lys
>WENV170091127
CEAF01072088
346451
Bacillota
TTT
Lys
>WENV170089756
CEAF01018175
27216
Bacillota
GCT
Ser
>WENV170090391
CEAF01043085
480322
Bacillota
CTG
Gln
>WENV170090447
CEAF01045352
480322
Bacillota
CTG
Gln
>WENV170090933
CEAF01064689
480322
Bacillota
CTG
Gln
>WENV170089519
CEAF01009990
398854
Bacillota
CTC
Glu
>WENV170091123
CEAF01071993
398854
Bacillota
CTC
Glu
>WENV170089348
CEAF01004225
480324
Bacillota
TTG
Gln
>WENV170089851
CEAF01021384
480324
Bacillota
TTG
Gln
>WENV170090657
CEAF01053808
480324
Bacillota
TTG
Gln
>WENV170090658
CEAF01053898
480324
Bacillota
TTG
Gln
>WENV170089321
CEAF01003463
497729
Bacillota
CCA
Trp
>WENV170090249
CEAF01037480
497729
Bacillota
CCA
Trp
>WENV170090070
CEAF01030029
303718
Bacillota
TGT
Thr
>WENV170090940
CEAF01064990
303718
Bacillota
TGT
Thr
>WENV170089528
CEAF01010141
186051
Bacillota
GAT
Ile
>WENV170090659
CEAF01053959
280444
Bacillota
GGT
Thr
>WENV170090479
CEAF01046620
483485
Bacillota
CCC
Gly
>WENV170090531
CEAF01048856
342104
Bacillota
TAC
Val
>WENV170089761
CEAF01018610
179755
Bacillota
CCG
Arg
>WENV170089834
CEAF01020856
179755
Bacillota
CCG
Arg
>WENV170090092
CEAF01031083
179755
Bacillota
CCG
Arg
>WENV170090151
CEAF01032347
46835
Bacillota
TAA
Leu
>WENV170090282
CEAF01038150
46835
Bacillota
TAA
Leu
>WENV170090949
CEAF01065121
46835
Bacillota
TAA
Leu
>WENV170089244
CEAF01001126
398832
Bacillota
TTC
Glu
>WENV170089401
CEAF01006201
25955
Bacillota
GCT
Ser
>WENV170089741
CEAF01017445
118669
Bacillota
GTA
Tyr
>WENV170089535
CEAF01010159
52748
Bacillota
TGA
Ser
>WENV170090399
CEAF01043180
52748
Bacillota
TGA
Ser
>WENV170090152
CEAF01032395
398852
Bacillota
CTC
Glu
>WENV170089653
CEAF01014711
289123
Bacillota
GGT
Thr
>WENV170090039
CEAF01028439
175857
Bacillota
GTG
His
>WENV170090197
CEAF01034630
175857
Bacillota
GTG
His
>WENV170089265
CEAF01002366
398833
Bacillota
TGT
Thr
>WENV170089563
CEAF01011677
280486
Bacillota
TGC
Ala
>WENV170089763
CEAF01018622
405393
Bacillota
GCC
Gly
>WENV170090750
CEAF01058345
405393
Bacillota
GCC
Gly
>WENV170090754
CEAF01058345
405393
Bacillota
GCC
Gly
>WENV170089793
CEAF01019700
56074
Bacillota
TGA
Ser
>WENV170090180
CEAF01033999
56074
Bacillota
TGA
Ser
>WENV170090837
CEAF01060595
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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