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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170094595
CEAI01002382
349107
Bacillota
GCC
Gly
>WENV170094726
CEAI01005849
405363
Bacillota
GCA
Cys
>WENV170094668
CEAI01004524
175842
Bacillota
CAC
Val
>WENV170094924
CEAI01012412
175842
Bacillota
CAC
Val
>WENV170094971
CEAI01013995
175842
Bacillota
CAC
Val
>WENV170095263
CEAI01024465
215243
Bacillota
CAT
Met
>WENV170095252
CEAI01024080
73664
Bacillota
CAG
Leu
>WENV170094853
CEAI01010393
280447
Bacillota
GAC
Val
>WENV170095034
CEAI01016529
280447
Bacillota
GAC
Val
>WENV170095223
CEAI01023280
280447
Bacillota
GAC
Val
>WENV170094817
CEAI01009511
5692
Bacillota
GCT
Ser
>WENV170094834
CEAI01009913
73009
Bacillota
CAG
Leu
>WENV170094959
CEAI01013460
73009
Bacillota
CAG
Leu
>WENV170095060
CEAI01017192
73009
Bacillota
CAG
Leu
>WENV170095277
CEAI01024796
73009
Bacillota
CAG
Leu
>WENV170094695
CEAI01005472
291581
Bacillota
CGG
Pro
>WENV170094846
CEAI01010238
175859
Bacillota
TCT
Arg
>WENV170094610
CEAI01003031
175831
Bacillota
ACG
Arg
>WENV170094573
CEAI01001489
295350
Bacillota
TGC
Ala
>WENV170094544
CEAI01000356
480322
Bacillota
CTG
Gln
>WENV170095016
CEAI01015772
480322
Bacillota
CTG
Gln
>WENV170095089
CEAI01018321
175868
Bacillota
GTT
Asn
>WENV170095173
CEAI01020941
175868
Bacillota
GTT
Asn
>WENV170095208
CEAI01022836
175868
Bacillota
GTT
Asn
>WENV170095220
CEAI01023244
175868
Bacillota
GTT
Asn
>WENV170095088
CEAI01018321
398854
Bacillota
CTC
Glu
>WENV170095207
CEAI01022836
398854
Bacillota
CTC
Glu
>WENV170094972
CEAI01014010
291576
Bacillota
CCC
Gly
>WENV170094641
CEAI01003801
480324
Bacillota
TTG
Gln
>WENV170094810
CEAI01009206
480324
Bacillota
TTG
Gln
>WENV170094602
CEAI01002684
497729
Bacillota
CCA
Trp
>WENV170095116
CEAI01018866
303718
Bacillota
TGT
Thr
>WENV170094984
CEAI01014744
323864
Bacillota
TGC
Ala
>WENV170094798
CEAI01008619
292374
Bacillota
TGC
Ala
>WENV170095141
CEAI01019914
292374
Bacillota
TGC
Ala
>WENV170094848
CEAI01010244
117745
Bacillota
GTA
Tyr
>WENV170094826
CEAI01009665
280444
Bacillota
GGT
Thr
>WENV170094827
CEAI01009665
280444
Bacillota
GGT
Thr
>WENV170094998
CEAI01015199
280444
Bacillota
GGT
Thr
>WENV170095282
CEAI01025097
179755
Bacillota
CCG
Arg
>WENV170094571
CEAI01001330
398832
Bacillota
TTC
Glu
>WENV170094799
CEAI01008643
398852
Bacillota
CTC
Glu
>WENV170094797
CEAI01008619
201856
Bacillota
GAT
Ile
>WENV170095085
CEAI01018284
398833
Bacillota
TGT
Thr
>WENV170095204
CEAI01022632
398833
Bacillota
TGT
Thr
>WENV170094555
CEAI01000846
280463
Bacillota
TTT
Lys
>WENV170094816
CEAI01009511
56074
Bacillota
TGA
Ser
>WENV170095280
CEAI01025087
56074
Bacillota
TGA
Ser
>WENV170095199
CEAI01022412
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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