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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170096688
CEAK01028257
510477
Bacillota
TCC
Gly
>WENV170096739
CEAK01030787
280500
Bacillota
TGC
Ala
>WENV170096232
CEAK01009392
349107
Bacillota
GCC
Gly
>WENV170096758
CEAK01031630
349107
Bacillota
GCC
Gly
>WENV170096759
CEAK01031630
405363
Bacillota
GCA
Cys
>WENV170096231
CEAK01009392
280428
Bacillota
GAA
Phe
>WENV170096118
CEAK01004868
229015
Bacillota
GTG
His
>WENV170096521
CEAK01020524
175842
Bacillota
CAC
Val
>WENV170096106
CEAK01004246
291629
Bacillota
CCA
Trp
>WENV170096606
CEAK01024145
291629
Bacillota
CCA
Trp
>WENV170096728
CEAK01030488
215243
Bacillota
CAT
Met
>WENV170096460
CEAK01017410
73664
Bacillota
CAG
Leu
>WENV170096327
CEAK01013105
280447
Bacillota
GAC
Val
>WENV170096715
CEAK01029487
280447
Bacillota
GAC
Val
>WENV170096832
CEAK01034596
280447
Bacillota
GAC
Val
>WENV170096839
CEAK01034721
280447
Bacillota
GAC
Val
>WENV170096028
CEAK01001522
186123
Bacillota
GTC
Asp
>WENV170096104
CEAK01004246
186123
Bacillota
GTC
Asp
>WENV170096604
CEAK01024145
186123
Bacillota
GTC
Asp
>WENV170096598
CEAK01023763
73009
Bacillota
CAG
Leu
>WENV170096430
CEAK01016267
291581
Bacillota
CGG
Pro
>WENV170096788
CEAK01032779
291581
Bacillota
CGG
Pro
>WENV170095982
CEAK01000128
175859
Bacillota
TCT
Arg
>WENV170096010
CEAK01000316
175859
Bacillota
TCT
Arg
>WENV170096214
CEAK01008614
175831
Bacillota
ACG
Arg
>WENV170096374
CEAK01014704
175831
Bacillota
ACG
Arg
>WENV170096065
CEAK01002056
332181
Bacillota
TGT
Thr
>WENV170096029
CEAK01001522
291634
Bacillota
GAA
Phe
>WENV170096365
CEAK01014471
291634
Bacillota
GAA
Phe
>WENV170096166
CEAK01006895
346451
Bacillota
TTT
Lys
>WENV170096476
CEAK01018540
346451
Bacillota
TTT
Lys
>WENV170096406
CEAK01015420
27216
Bacillota
GCT
Ser
>WENV170096429
CEAK01016267
480322
Bacillota
CTG
Gln
>WENV170096782
CEAK01032531
480322
Bacillota
CTG
Gln
>WENV170096099
CEAK01003921
175868
Bacillota
GTT
Asn
>WENV170096618
CEAK01025108
175868
Bacillota
GTT
Asn
>WENV170096647
CEAK01026689
175868
Bacillota
GTT
Asn
>WENV170096768
CEAK01031723
175868
Bacillota
GTT
Asn
>WENV170096589
CEAK01023459
398854
Bacillota
CTC
Glu
>WENV170096767
CEAK01031723
398854
Bacillota
CTC
Glu
>WENV170096267
CEAK01010376
291576
Bacillota
CCC
Gly
>WENV170096368
CEAK01014589
480324
Bacillota
TTG
Gln
>WENV170096799
CEAK01033534
480324
Bacillota
TTG
Gln
>WENV170096726
CEAK01030112
497729
Bacillota
CCA
Trp
>WENV170096191
CEAK01007494
303718
Bacillota
TGT
Thr
>WENV170096286
CEAK01011239
323864
Bacillota
TGC
Ala
>WENV170096426
CEAK01016129
292374
Bacillota
TGC
Ala
>WENV170096572
CEAK01022796
280444
Bacillota
GGT
Thr
>WENV170096155
CEAK01006082
179755
Bacillota
CCG
Arg
>WENV170096170
CEAK01007072
201856
Bacillota
GAT
Ile
>WENV170096425
CEAK01016129
201856
Bacillota
GAT
Ile
>WENV170096068
CEAK01002056
289123
Bacillota
GGT
Thr
>WENV170096552
CEAK01021531
398833
Bacillota
TGT
Thr
>WENV170096757
CEAK01031630
175849
Bacillota
GTC
Asp
>WENV170096030
CEAK01001522
405393
Bacillota
GCC
Gly
>WENV170096105
CEAK01004246
405393
Bacillota
GCC
Gly
>WENV170096605
CEAK01024145
405393
Bacillota
GCC
Gly
>WENV170096792
CEAK01033049
405393
Bacillota
GCC
Gly
>WENV170096229
CEAK01009382
56074
Bacillota
TGA
Ser
>WENV170096542
CEAK01021200
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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