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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170097788
CEAM01004973
280500
Bacillota
TGC
Ala
>WENV170097899
CEAM01007923
405363
Bacillota
GCA
Cys
>WENV170097844
CEAM01006843
280428
Bacillota
GAA
Phe
>WENV170098109
CEAM01013771
280428
Bacillota
GAA
Phe
>WENV170097776
CEAM01004888
280644
Bacillota
CCA
Trp
>WENV170097842
CEAM01006843
280466
Bacillota
TAC
Val
>WENV170097986
CEAM01010040
280492
Bacillota
CTT
Lys
>WENV170097848
CEAM01006931
280642
Bacillota
TTG
Gln
>WENV170098084
CEAM01013327
175842
Bacillota
CAC
Val
>WENV170097849
CEAM01006931
280639
Bacillota
TTT
Lys
>WENV170097852
CEAM01006931
176018
Bacillota
CAT
Met
>WENV170097642
CEAM01000361
179176
Bacillota
ACG
Arg
>WENV170097814
CEAM01005667
190476
Bacillota
CAT
Met
>WENV170097682
CEAM01001356
280447
Bacillota
GAC
Val
>WENV170098083
CEAM01013327
280447
Bacillota
GAC
Val
>WENV170097856
CEAM01006931
480360
Bacillota
GCA
Cys
>WENV170097984
CEAM01009834
175825
Bacillota
GAT
Ile
>WENV170097913
CEAM01008139
73009
Bacillota
CAG
Leu
>WENV170098050
CEAM01012331
73009
Bacillota
CAG
Leu
>WENV170097931
CEAM01008664
481217
Bacillota
GCA
Cys
>WENV170097821
CEAM01005913
280646
Bacillota
TGC
Ala
>WENV170098065
CEAM01012857
291581
Bacillota
CGG
Pro
>WENV170097705
CEAM01002800
175859
Bacillota
TCT
Arg
>WENV170097818
CEAM01005798
175859
Bacillota
TCT
Arg
>WENV170097983
CEAM01009834
280436
Bacillota
TGC
Ala
>WENV170097816
CEAM01005667
175831
Bacillota
ACG
Arg
>WENV170097774
CEAM01004888
176015
Bacillota
TGG
Pro
>WENV170097777
CEAM01004888
176015
Bacillota
TGG
Pro
>WENV170097854
CEAM01006931
176015
Bacillota
TGG
Pro
>WENV170097787
CEAM01004973
175916
Bacillota
GAT
Ile
>WENV170098064
CEAM01012857
480322
Bacillota
CTG
Gln
>WENV170098072
CEAM01012946
480322
Bacillota
CTG
Gln
>WENV170098063
CEAM01012827
175868
Bacillota
GTT
Asn
>WENV170098111
CEAM01013790
175868
Bacillota
GTT
Asn
>WENV170097647
CEAM01000733
322848
Bacillota
CTT
Lys
>WENV170098062
CEAM01012827
398854
Bacillota
CTC
Glu
>WENV170097767
CEAM01004613
480324
Bacillota
TTG
Gln
>WENV170098044
CEAM01012004
323864
Bacillota
TGC
Ala
>WENV170097855
CEAM01006931
176019
Bacillota
GTG
His
>WENV170098126
CEAM01014764
280444
Bacillota
GGT
Thr
>WENV170098128
CEAM01014764
280444
Bacillota
GGT
Thr
>WENV170097641
CEAM01000252
179755
Bacillota
CCG
Arg
>WENV170098099
CEAM01013550
46835
Bacillota
TAA
Leu
>WENV170097815
CEAM01005667
398832
Bacillota
TTC
Glu
>WENV170097835
CEAM01006451
398832
Bacillota
TTC
Glu
>WENV170097969
CEAM01009528
280476
Bacillota
TTT
Lys
>WENV170097714
CEAM01003165
280462
Bacillota
GAA
Phe
>WENV170097954
CEAM01009213
175857
Bacillota
GTG
His
>WENV170097967
CEAM01009528
175857
Bacillota
GTG
His
>WENV170097933
CEAM01008811
398833
Bacillota
TGT
Thr
>WENV170097843
CEAM01006843
175849
Bacillota
GTC
Asp
>WENV170097897
CEAM01007923
175849
Bacillota
GTC
Asp
>WENV170098127
CEAM01014764
175849
Bacillota
GTC
Asp
>WENV170097956
CEAM01009213
280463
Bacillota
TTT
Lys
>WENV170097680
CEAM01001356
56074
Bacillota
TGA
Ser
>WENV170097750
CEAM01003714
56074
Bacillota
TGA
Ser
>WENV170097712
CEAM01002917
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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