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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
52 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170098631
CEAN01011881
184537
Bacillota
ACG
Arg
>WENV170098591
CEAN01010881
480359
Bacillota
TCC
Gly
>WENV170098675
CEAN01013195
296855
Bacillota
GGT
Thr
>WENV170098687
CEAN01013353
48505
Bacillota
TGA
Ser
>WENV170098135
CEAN01000180
280492
Bacillota
CTT
Lys
>WENV170098515
CEAN01008683
280492
Bacillota
CTT
Lys
>WENV170098592
CEAN01010936
280492
Bacillota
CTT
Lys
>WENV170098232
CEAN01002536
287289
Bacillota
GCC
Gly
>WENV170098347
CEAN01005466
289717
Bacillota
CTT
Lys
>WENV170098608
CEAN01011401
20932
Bacillota
GCT
Ser
>WENV170098373
CEAN01005983
291553
Bacillota
GAA
Phe
>WENV170098519
CEAN01008849
295166
Bacillota
TGC
Ala
>WENV170098496
CEAN01008398
482593
Bacillota
CCC
Gly
>WENV170098627
CEAN01011864
20942
Bacillota
GGA
Ser
>WENV170098567
CEAN01010626
73664
Bacillota
CAG
Leu
>WENV170098208
CEAN01002037
480360
Bacillota
GCA
Cys
>WENV170098590
CEAN01010881
402717
Bacillota
TTC
Glu
>WENV170098229
CEAN01002463
398835
Bacillota
GCC
Gly
>WENV170098282
CEAN01004037
398835
Bacillota
GCC
Gly
>WENV170098431
CEAN01007155
398835
Bacillota
GCC
Gly
>WENV170098387
CEAN01006425
184495
Bacillota
CAT
Met
>WENV170098676
CEAN01013195
184495
Bacillota
CAT
Met
>WENV170098540
CEAN01009444
141202
Bacillota
CAA
Leu
>WENV170098203
CEAN01001885
295350
Bacillota
TGC
Ala
>WENV170098210
CEAN01002037
280640
Bacillota
TAC
Val
>WENV170098581
CEAN01010799
404091
Bacillota
TTG
Gln
>WENV170098379
CEAN01006121
187364
Bacillota
CAT
Met
>WENV170098580
CEAN01010799
289716
Bacillota
GTG
His
>WENV170098251
CEAN01002992
175899
Bacillota
GTC
Asp
>WENV170098625
CEAN01011856
73638
Bacillota
AAG
Leu
>WENV170098288
CEAN01004321
56079
Bacillota
AAG
Leu
>WENV170098550
CEAN01009914
56079
Bacillota
AAG
Leu
>WENV170098566
CEAN01010626
56079
Bacillota
AAG
Leu
>WENV170098493
CEAN01008335
480337
Bacillota
TCC
Gly
>WENV170098226
CEAN01002253
292374
Bacillota
TGC
Ala
>WENV170098204
CEAN01001885
186051
Bacillota
GAT
Ile
>WENV170098144
CEAN01000492
117745
Bacillota
GTA
Tyr
>WENV170098632
CEAN01011881
119459
Bacillota
TAG
Leu
>WENV170098598
CEAN01011141
46643
Bacillota
TGA
Ser
>WENV170098357
CEAN01005832
179755
Bacillota
CCG
Arg
>WENV170098372
CEAN01005983
280547
Bacillota
GTC
Asp
>WENV170098582
CEAN01010799
289761
Bacillota
TTT
Lys
>WENV170098509
CEAN01008600
46835
Bacillota
TAA
Leu
>WENV170098348
CEAN01005473
20943
Bacillota
CGA
Ser
>WENV170098264
CEAN01003106
280462
Bacillota
GAA
Phe
>WENV170098168
CEAN01001165
398852
Bacillota
CTC
Glu
>WENV170098397
CEAN01006593
398852
Bacillota
CTC
Glu
>WENV170098661
CEAN01012820
398852
Bacillota
CTC
Glu
>WENV170098246
CEAN01002965
175857
Bacillota
GTG
His
>WENV170098248
CEAN01002965
280463
Bacillota
TTT
Lys
>WENV170098265
CEAN01003106
280463
Bacillota
TTT
Lys
>WENV170098289
CEAN01004557
280486
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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