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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170102306
CEAX01010239
99852
Bacillota
GTA
Tyr
>WENV170103352
CEAX01045852
343590
Bacillota
GCC
Gly
>WENV170103568
CEAX01052063
343590
Bacillota
GCC
Gly
>WENV170102847
CEAX01027088
234991
Bacillota
GAT
Ile
>WENV170102698
CEAX01022930
280500
Bacillota
TGC
Ala
>WENV170103551
CEAX01051842
405357
Bacillota
TTC
Glu
>WENV170102265
CEAX01008508
229015
Bacillota
GTG
His
>WENV170102218
CEAX01006681
179917
Bacillota
CAT
Met
>WENV170102987
CEAX01031062
280492
Bacillota
CTT
Lys
>WENV170102998
CEAX01031704
280492
Bacillota
CTT
Lys
>WENV170103275
CEAX01042200
280492
Bacillota
CTT
Lys
>WENV170102597
CEAX01019803
175842
Bacillota
CAC
Val
>WENV170102971
CEAX01030374
175842
Bacillota
CAC
Val
>WENV170103308
CEAX01043667
175842
Bacillota
CAC
Val
>WENV170102532
CEAX01018023
291629
Bacillota
CCA
Trp
>WENV170103480
CEAX01049522
348419
Bacillota
GTT
Asn
>WENV170102985
CEAX01031039
190476
Bacillota
CAT
Met
>WENV170102127
CEAX01003033
73664
Bacillota
CAG
Leu
>WENV170102062
CEAX01000340
280447
Bacillota
GAC
Val
>WENV170102278
CEAX01009184
280447
Bacillota
GAC
Val
>WENV170102582
CEAX01019132
280447
Bacillota
GAC
Val
>WENV170102895
CEAX01028715
280447
Bacillota
GAC
Val
>WENV170102530
CEAX01018023
186123
Bacillota
GTC
Asp
>WENV170102793
CEAX01025951
280427
Bacillota
TAC
Val
>WENV170102930
CEAX01029872
280427
Bacillota
TAC
Val
>WENV170103382
CEAX01046402
284723
Bacillota
TAC
Val
>WENV170102459
CEAX01015887
189473
Bacillota
GAT
Ile
>WENV170102796
CEAX01025951
290325
Bacillota
GCC
Gly
>WENV170102932
CEAX01029872
290325
Bacillota
GCC
Gly
>WENV170102070
CEAX01000765
175831
Bacillota
ACG
Arg
>WENV170103591
CEAX01052880
332181
Bacillota
TGT
Thr
>WENV170102264
CEAX01008508
179810
Bacillota
TCT
Arg
>WENV170102489
CEAX01016660
284627
Bacillota
GAA
Phe
>WENV170102903
CEAX01028995
284627
Bacillota
GAA
Phe
>WENV170102167
CEAX01004460
346451
Bacillota
TTT
Lys
>WENV170102754
CEAX01024304
346451
Bacillota
TTT
Lys
>WENV170102259
CEAX01008417
295350
Bacillota
TGC
Ala
>WENV170102331
CEAX01011128
480322
Bacillota
CTG
Gln
>WENV170103231
CEAX01040401
480322
Bacillota
CTG
Gln
>WENV170103415
CEAX01047643
480322
Bacillota
CTG
Gln
>WENV170102248
CEAX01007979
175868
Bacillota
GTT
Asn
>WENV170102651
CEAX01021629
175868
Bacillota
GTT
Asn
>WENV170103050
CEAX01034074
175868
Bacillota
GTT
Asn
>WENV170103490
CEAX01049796
175868
Bacillota
GTT
Asn
>WENV170102831
CEAX01026799
322848
Bacillota
CTT
Lys
>WENV170103127
CEAX01036632
291576
Bacillota
CCC
Gly
>WENV170102304
CEAX01010084
480324
Bacillota
TTG
Gln
>WENV170102511
CEAX01017172
497729
Bacillota
CCA
Trp
>WENV170102964
CEAX01030368
175899
Bacillota
GTC
Asp
>WENV170103206
CEAX01039336
303718
Bacillota
TGT
Thr
>WENV170102125
CEAX01003033
56079
Bacillota
AAG
Leu
>WENV170102126
CEAX01003033
56079
Bacillota
AAG
Leu
>WENV170102821
CEAX01026432
323864
Bacillota
TGC
Ala
>WENV170102722
CEAX01023303
117745
Bacillota
GTA
Tyr
>WENV170102967
CEAX01030368
117745
Bacillota
GTA
Tyr
>WENV170102151
CEAX01003911
280444
Bacillota
GGT
Thr
>WENV170102261
CEAX01008463
280444
Bacillota
GGT
Thr
>WENV170102689
CEAX01022536
280444
Bacillota
GGT
Thr
>WENV170102765
CEAX01024391
280444
Bacillota
GGT
Thr
>WENV170102841
CEAX01026873
483485
Bacillota
CCC
Gly
>WENV170102446
CEAX01015245
46643
Bacillota
TGA
Ser
>WENV170102865
CEAX01027590
46643
Bacillota
TGA
Ser
>WENV170102443
CEAX01015228
223045
Bacillota
GAT
Ile
>WENV170102510
CEAX01017086
223045
Bacillota
GAT
Ile
>WENV170102848
CEAX01027088
291650
Bacillota
TGC
Ala
>WENV170102986
CEAX01031039
398832
Bacillota
TTC
Glu
>WENV170103190
CEAX01038872
398832
Bacillota
TTC
Glu
>WENV170102158
CEAX01003948
118669
Bacillota
GTA
Tyr
>WENV170102600
CEAX01019948
118669
Bacillota
GTA
Tyr
>WENV170102197
CEAX01005797
280462
Bacillota
GAA
Phe
>WENV170102969
CEAX01030368
280462
Bacillota
GAA
Phe
>WENV170102746
CEAX01023781
398852
Bacillota
CTC
Glu
>WENV170102887
CEAX01028522
398852
Bacillota
CTC
Glu
>WENV170102900
CEAX01028975
398852
Bacillota
CTC
Glu
>WENV170103426
CEAX01047936
398852
Bacillota
CTC
Glu
>WENV170103594
CEAX01052880
289123
Bacillota
GGT
Thr
>WENV170102336
CEAX01011308
175857
Bacillota
GTG
His
>WENV170103133
CEAX01036967
175857
Bacillota
GTG
His
>WENV170102861
CEAX01027374
398833
Bacillota
TGT
Thr
>WENV170102970
CEAX01030368
280463
Bacillota
TTT
Lys
>WENV170103135
CEAX01036967
280463
Bacillota
TTT
Lys
>WENV170102531
CEAX01018023
405393
Bacillota
GCC
Gly
>WENV170102109
CEAX01002445
280473
Bacillota
TGG
Pro
>WENV170102329
CEAX01010959
280473
Bacillota
TGG
Pro
>WENV170102569
CEAX01018582
280473
Bacillota
TGG
Pro
>WENV170103302
CEAX01043386
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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