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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170104116
CEAZ01021130
510477
Bacillota
TCC
Gly
>WENV170103887
CEAZ01011088
99852
Bacillota
GTA
Tyr
>WENV170104882
CEAZ01051869
343590
Bacillota
GCC
Gly
>WENV170104950
CEAZ01055979
234991
Bacillota
GAT
Ile
>WENV170103658
CEAZ01001510
280492
Bacillota
CTT
Lys
>WENV170104686
CEAZ01044417
280492
Bacillota
CTT
Lys
>WENV170104427
CEAZ01032784
175842
Bacillota
CAC
Val
>WENV170104767
CEAZ01046826
175842
Bacillota
CAC
Val
>WENV170104326
CEAZ01028771
291629
Bacillota
CCA
Trp
>WENV170104434
CEAZ01032979
352588
Bacillota
CAT
Met
>WENV170104911
CEAZ01053264
190476
Bacillota
CAT
Met
>WENV170104358
CEAZ01029822
73664
Bacillota
CAG
Leu
>WENV170105016
CEAZ01058908
280447
Bacillota
GAC
Val
>WENV170103839
CEAZ01008732
312274
Bacillota
GGC
Ala
>WENV170104324
CEAZ01028771
186123
Bacillota
GTC
Asp
>WENV170104643
CEAZ01042350
186123
Bacillota
GTC
Asp
>WENV170105072
CEAZ01060378
186123
Bacillota
GTC
Asp
>WENV170105165
CEAZ01064480
481217
Bacillota
GCA
Cys
>WENV170104883
CEAZ01051921
189473
Bacillota
GAT
Ile
>WENV170104372
CEAZ01030519
175859
Bacillota
TCT
Arg
>WENV170105192
CEAZ01065591
175859
Bacillota
TCT
Arg
>WENV170104354
CEAZ01029816
332181
Bacillota
TGT
Thr
>WENV170104644
CEAZ01042350
291634
Bacillota
GAA
Phe
>WENV170105073
CEAZ01060378
291634
Bacillota
GAA
Phe
>WENV170104613
CEAZ01041596
346451
Bacillota
TTT
Lys
>WENV170104990
CEAZ01057899
346451
Bacillota
TTT
Lys
>WENV170104473
CEAZ01035049
175868
Bacillota
GTT
Asn
>WENV170105205
CEAZ01066005
175868
Bacillota
GTT
Asn
>WENV170103721
CEAZ01004594
291576
Bacillota
CCC
Gly
>WENV170103692
CEAZ01002554
480324
Bacillota
TTG
Gln
>WENV170104043
CEAZ01018011
480324
Bacillota
TTG
Gln
>WENV170104987
CEAZ01057659
480324
Bacillota
TTG
Gln
>WENV170103706
CEAZ01003338
497729
Bacillota
CCA
Trp
>WENV170104035
CEAZ01017805
175899
Bacillota
GTC
Asp
>WENV170104447
CEAZ01033481
303718
Bacillota
TGT
Thr
>WENV170104356
CEAZ01029822
56079
Bacillota
AAG
Leu
>WENV170104357
CEAZ01029822
56079
Bacillota
AAG
Leu
>WENV170103645
CEAZ01000980
323864
Bacillota
TGC
Ala
>WENV170104988
CEAZ01057873
323864
Bacillota
TGC
Ala
>WENV170105212
CEAZ01066107
117745
Bacillota
GTA
Tyr
>WENV170104405
CEAZ01032093
280444
Bacillota
GGT
Thr
>WENV170104659
CEAZ01043133
223045
Bacillota
GAT
Ile
>WENV170103900
CEAZ01011403
179755
Bacillota
CCG
Arg
>WENV170105040
CEAZ01059334
179755
Bacillota
CCG
Arg
>WENV170104951
CEAZ01055979
291650
Bacillota
TGC
Ala
>WENV170104284
CEAZ01028069
46835
Bacillota
TAA
Leu
>WENV170104533
CEAZ01037273
398832
Bacillota
TTC
Glu
>WENV170104912
CEAZ01053264
398832
Bacillota
TTC
Glu
>WENV170104106
CEAZ01021110
280462
Bacillota
GAA
Phe
>WENV170105230
CEAZ01066656
280462
Bacillota
GAA
Phe
>WENV170104113
CEAZ01021118
398852
Bacillota
CTC
Glu
>WENV170104494
CEAZ01035642
398852
Bacillota
CTC
Glu
>WENV170104830
CEAZ01049896
398852
Bacillota
CTC
Glu
>WENV170104504
CEAZ01036109
298260
Bacillota
GTT
Asn
>WENV170105185
CEAZ01065017
175857
Bacillota
GTG
His
>WENV170103657
CEAZ01001348
175849
Bacillota
GTC
Asp
>WENV170104424
CEAZ01032391
280463
Bacillota
TTT
Lys
>WENV170104263
CEAZ01027142
405393
Bacillota
GCC
Gly
>WENV170104325
CEAZ01028771
405393
Bacillota
GCC
Gly
>WENV170104621
CEAZ01041609
405393
Bacillota
GCC
Gly
>WENV170104645
CEAZ01042350
405393
Bacillota
GCC
Gly
>WENV170105003
CEAZ01058456
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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