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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170109597
CECB01003471
99852
Bacillota
GTA
Tyr
>WENV170109728
CECB01005913
349107
Bacillota
GCC
Gly
>WENV170109729
CECB01005913
405363
Bacillota
GCA
Cys
>WENV170109645
CECB01004690
175842
Bacillota
CAC
Val
>WENV170109442
CECB01000962
190476
Bacillota
CAT
Met
>WENV170109579
CECB01003328
280447
Bacillota
GAC
Val
>WENV170109808
CECB01007547
280447
Bacillota
GAC
Val
>WENV170109830
CECB01008011
280447
Bacillota
GAC
Val
>WENV170109664
CECB01004884
5692
Bacillota
GCT
Ser
>WENV170109689
CECB01005269
175825
Bacillota
GAT
Ile
>WENV170109671
CECB01005007
73009
Bacillota
CAG
Leu
>WENV170109696
CECB01005389
291581
Bacillota
CGG
Pro
>WENV170109523
CECB01002553
175859
Bacillota
TCT
Arg
>WENV170109525
CECB01002631
175859
Bacillota
TCT
Arg
>WENV170109455
CECB01001148
398835
Bacillota
GCC
Gly
>WENV170109688
CECB01005269
280436
Bacillota
TGC
Ala
>WENV170109605
CECB01003678
175831
Bacillota
ACG
Arg
>WENV170109783
CECB01006945
175831
Bacillota
ACG
Arg
>WENV170109675
CECB01005060
480322
Bacillota
CTG
Gln
>WENV170109695
CECB01005389
480322
Bacillota
CTG
Gln
>WENV170109441
CECB01000956
398854
Bacillota
CTC
Glu
>WENV170109494
CECB01002005
398854
Bacillota
CTC
Glu
>WENV170109687
CECB01005240
291576
Bacillota
CCC
Gly
>WENV170109700
CECB01005460
480324
Bacillota
TTG
Gln
>WENV170109643
CECB01004606
480324
Bacillota
TTG
Gln
>WENV170109599
CECB01003573
292374
Bacillota
TGC
Ala
>WENV170109606
CECB01003686
280444
Bacillota
GGT
Thr
>WENV170109607
CECB01003686
280444
Bacillota
GGT
Thr
>WENV170109788
CECB01006995
179755
Bacillota
CCG
Arg
>WENV170109443
CECB01000962
398832
Bacillota
TTC
Glu
>WENV170109633
CECB01004267
398832
Bacillota
TTC
Glu
>WENV170109466
CECB01001343
332651
Bacillota
GTT
Asn
>WENV170109697
CECB01005405
332651
Bacillota
GTT
Asn
>WENV170109598
CECB01003573
201856
Bacillota
GAT
Ile
>WENV170109447
CECB01001117
175849
Bacillota
GTC
Asp
>WENV170109464
CECB01001249
280473
Bacillota
TGG
Pro
>WENV170109784
CECB01006979
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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