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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
47 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170110230
CECF01016836
280500
Bacillota
TGC
Ala
>WENV170110068
CECF01009116
405363
Bacillota
GCA
Cys
>WENV170110939
CECF01052299
229015
Bacillota
GTG
His
>WENV170111039
CECF01056668
179917
Bacillota
CAT
Met
>WENV170110149
CECF01013083
175842
Bacillota
CAC
Val
>WENV170111189
CECF01064428
179563
Bacillota
GAT
Ile
>WENV170110606
CECF01035881
215243
Bacillota
CAT
Met
>WENV170110913
CECF01050666
190476
Bacillota
CAT
Met
>WENV170110820
CECF01046020
280447
Bacillota
GAC
Val
>WENV170110916
CECF01050966
312274
Bacillota
GGC
Ala
>WENV170110770
CECF01043433
175859
Bacillota
TCT
Arg
>WENV170111013
CECF01055613
175859
Bacillota
TCT
Arg
>WENV170110739
CECF01042340
280436
Bacillota
TGC
Ala
>WENV170110213
CECF01015900
290325
Bacillota
GCC
Gly
>WENV170111188
CECF01064428
353153
Bacillota
TGC
Ala
>WENV170109993
CECF01006870
332181
Bacillota
TGT
Thr
>WENV170110938
CECF01052299
179810
Bacillota
TCT
Arg
>WENV170110176
CECF01013991
480322
Bacillota
CTG
Gln
>WENV170110993
CECF01054747
480322
Bacillota
CTG
Gln
>WENV170110145
CECF01012937
175868
Bacillota
GTT
Asn
>WENV170110527
CECF01032464
175868
Bacillota
GTT
Asn
>WENV170110575
CECF01033850
175868
Bacillota
GTT
Asn
>WENV170111087
CECF01059460
175868
Bacillota
GTT
Asn
>WENV170111190
CECF01064459
287280
Bacillota
TGT
Thr
>WENV170109905
CECF01002254
480324
Bacillota
TTG
Gln
>WENV170110747
CECF01042742
480324
Bacillota
TTG
Gln
>WENV170109979
CECF01006106
303718
Bacillota
TGT
Thr
>WENV170110418
CECF01026567
303718
Bacillota
TGT
Thr
>WENV170111016
CECF01056006
303718
Bacillota
TGT
Thr
>WENV170110650
CECF01037897
323864
Bacillota
TGC
Ala
>WENV170110767
CECF01043401
117745
Bacillota
GTA
Tyr
>WENV170111213
CECF01065703
280444
Bacillota
GGT
Thr
>WENV170110150
CECF01013084
342104
Bacillota
TAC
Val
>WENV170111234
CECF01066800
179755
Bacillota
CCG
Arg
>WENV170109883
CECF01001205
398832
Bacillota
TTC
Glu
>WENV170109913
CECF01002841
398832
Bacillota
TTC
Glu
>WENV170110266
CECF01018156
398832
Bacillota
TTC
Glu
>WENV170110914
CECF01050666
398832
Bacillota
TTC
Glu
>WENV170111233
CECF01066754
20943
Bacillota
CGA
Ser
>WENV170110695
CECF01039652
398852
Bacillota
CTC
Glu
>WENV170110705
CECF01040619
398852
Bacillota
CTC
Glu
>WENV170111110
CECF01060672
398852
Bacillota
CTC
Glu
>WENV170109996
CECF01006870
289123
Bacillota
GGT
Thr
>WENV170110401
CECF01025564
398833
Bacillota
TGT
Thr
>WENV170110846
CECF01046777
280463
Bacillota
TTT
Lys
>WENV170111065
CECF01058054
56074
Bacillota
TGA
Ser
>WENV170111269
CECF01068366
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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