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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV181448577
OGDW01000589
343590
Bacillota
GCC
Gly
>WENV181448946
OGDW01006163
343590
Bacillota
GCC
Gly
>WENV181449042
OGDW01010586
343590
Bacillota
GCC
Gly
>WENV181449098
OGDW01015747
280500
Bacillota
TGC
Ala
>WENV181448991
OGDW01008382
405357
Bacillota
TTC
Glu
>WENV181449114
OGDW01016725
291579
Bacillota
GAA
Phe
>WENV181448414
OGDW01000170
280492
Bacillota
CTT
Lys
>WENV181448657
OGDW01000956
280492
Bacillota
CTT
Lys
>WENV181449070
OGDW01012826
291629
Bacillota
CCA
Trp
>WENV181449202
OGDW01029631
236579
Bacillota
GAT
Ile
>WENV181449262
OGDW01046296
298270
Bacillota
TAC
Val
>WENV181449261
OGDW01046296
398915
Bacillota
TTC
Glu
>WENV181448760
OGDW01002091
352588
Bacillota
CAT
Met
>WENV181449201
OGDW01029631
295166
Bacillota
TGC
Ala
>WENV181448819
OGDW01002960
215243
Bacillota
CAT
Met
>WENV181448942
OGDW01006067
215243
Bacillota
CAT
Met
>WENV181448832
OGDW01003207
190476
Bacillota
CAT
Met
>WENV181448935
OGDW01005747
82124
Bacillota
TAA
Leu
>WENV181448393
OGDW01000134
73664
Bacillota
CAG
Leu
>WENV181448625
OGDW01000751
73664
Bacillota
CAG
Leu
>WENV181448494
OGDW01000373
312274
Bacillota
GGC
Ala
>WENV181448785
OGDW01002337
186123
Bacillota
GTC
Asp
>WENV181449163
OGDW01023623
280646
Bacillota
TGC
Ala
>WENV181449205
OGDW01030110
353153
Bacillota
TGC
Ala
>WENV181449035
OGDW01010127
332181
Bacillota
TGT
Thr
>WENV181448491
OGDW01000369
284627
Bacillota
GAA
Phe
>WENV181448717
OGDW01001551
284627
Bacillota
GAA
Phe
>WENV181448786
OGDW01002337
291634
Bacillota
GAA
Phe
>WENV181448840
OGDW01003294
346451
Bacillota
TTT
Lys
>WENV181448851
OGDW01003434
346451
Bacillota
TTT
Lys
>WENV181449168
OGDW01024702
295350
Bacillota
TGC
Ala
>WENV181449097
OGDW01015747
175916
Bacillota
GAT
Ile
>WENV181448516
OGDW01000437
27216
Bacillota
GCT
Ser
>WENV181448842
OGDW01003337
484885
Bacillota
TCC
Gly
>WENV181448427
OGDW01000192
187364
Bacillota
CAT
Met
>WENV181448806
OGDW01002690
497729
Bacillota
CCA
Trp
>WENV181448974
OGDW01007301
303718
Bacillota
TGT
Thr
>WENV181449048
OGDW01011505
73638
Bacillota
AAG
Leu
>WENV181448391
OGDW01000134
56079
Bacillota
AAG
Leu
>WENV181448392
OGDW01000134
56079
Bacillota
AAG
Leu
>WENV181448796
OGDW01002456
175911
Bacillota
GTC
Asp
>WENV181449001
OGDW01008720
292374
Bacillota
TGC
Ala
>WENV181448688
OGDW01001216
398857
Bacillota
TTC
Glu
>WENV181448429
OGDW01000196
117745
Bacillota
GTA
Tyr
>WENV181448490
OGDW01000362
483485
Bacillota
CCC
Gly
>WENV181448637
OGDW01000850
46643
Bacillota
TGA
Ser
>WENV181448761
OGDW01002099
179755
Bacillota
CCG
Arg
>WENV181449220
OGDW01033836
46835
Bacillota
TAA
Leu
>WENV181448833
OGDW01003207
398832
Bacillota
TTC
Glu
>WENV181448450
OGDW01000262
280462
Bacillota
GAA
Phe
>WENV181448282
OGDW01000011
398852
Bacillota
CTC
Glu
>WENV181448297
OGDW01000019
398852
Bacillota
CTC
Glu
>WENV181449000
OGDW01008720
201856
Bacillota
GAT
Ile
>WENV181449076
OGDW01013743
289123
Bacillota
GGT
Thr
>WENV181448330
OGDW01000056
280483
Bacillota
GAA
Phe
>WENV181449112
OGDW01016696
406186
Bacillota
CTC
Glu
>WENV181448331
OGDW01000056
285756
Bacillota
GCC
Gly
>WENV181448687
OGDW01001211
405393
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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