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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182276446
OHUP01003029
196621
Bacillota
GTC
Asp
>WENV182276674
OHUP01024416
155958
Bacillota
GAT
Ile
>WENV182276379
OHUP01001137
37213
Bacillota
TGA
Ser
>WENV182276356
OHUP01000770
144612
Bacillota
TCT
Arg
>WENV182276318
OHUP01000456
235098
Bacillota
GAC
Val
>WENV182276567
OHUP01009837
235098
Bacillota
GAC
Val
>WENV182276644
OHUP01019448
44854
Bacillota
TGA
Ser
>WENV182276717
OHUP01033165
429443
Bacillota
GCA
Cys
>WENV182276565
OHUP01009570
338147
Bacillota
CTC
Glu
>WENV182276430
OHUP01002512
338147
Bacillota
CTC
Glu
>WENV182276628
OHUP01017976
235150
Bacillota
TGC
Ala
>WENV182276631
OHUP01018283
235137
Bacillota
TGC
Ala
>WENV182276439
OHUP01002685
340802
Bacillota
TTG
Gln
>WENV182276350
OHUP01000737
293599
Bacillota
CTT
Lys
>WENV182276521
OHUP01005942
429429
Bacillota
CCA
Trp
>WENV182276264
OHUP01000142
313454
Bacillota
GAA
Phe
>WENV182276452
OHUP01003098
41154
Bacillota
TAA
Leu
>WENV182276463
OHUP01003294
44859
Bacillota
AAG
Leu
>WENV182276355
OHUP01000765
11034
Bacillota
GGA
Ser
>WENV182276417
OHUP01001995
274189
Bacillota
TGT
Thr
>WENV182276502
OHUP01005250
173314
Bacillota
GAT
Ile
>WENV182276522
OHUP01005950
338149
Bacillota
CTC
Glu
>WENV182276375
OHUP01001092
338149
Bacillota
CTC
Glu
>WENV182276283
OHUP01000221
245298
Bacillota
CGG
Pro
>WENV182276413
OHUP01001967
37269
Bacillota
TGA
Ser
>WENV182276293
OHUP01000275
37269
Bacillota
TGA
Ser
>WENV182276658
OHUP01021420
155089
Bacillota
CAT
Met
>WENV182276638
OHUP01019073
287000
Bacillota
GTT
Asn
>WENV182276758
OHUP01042150
413152
Bacillota
TCC
Gly
>WENV182276518
OHUP01005830
173810
Bacillota
CAT
Met
>WENV182276791
OHUP01048946
152492
Bacillota
GGG
Pro
>WENV182276551
OHUP01007871
411547
Bacillota
CTG
Gln
>WENV182276422
OHUP01002205
411547
Bacillota
CTG
Gln
>WENV182276282
OHUP01000221
411547
Bacillota
CTG
Gln
>WENV182276477
OHUP01004238
147684
Bacillota
ACG
Arg
>WENV182276645
OHUP01019448
4624
Bacillota
GCT
Ser
>WENV182276440
OHUP01002685
313164
Bacillota
TTT
Lys
>WENV182276447
OHUP01003029
235095
Bacillota
GGT
Thr
>WENV182276643
OHUP01019232
411549
Bacillota
TTG
Gln
>WENV182276472
OHUP01003909
235142
Bacillota
CTT
Lys
>WENV182276428
OHUP01002369
235142
Bacillota
CTT
Lys
>WENV182276189
OHUP01000023
245386
Bacillota
CCA
Trp
>WENV182276386
OHUP01001310
148188
Bacillota
CCG
Arg
>WENV182276776
OHUP01044507
298620
Bacillota
CAT
Met
>WENV182276729
OHUP01035694
241432
Bacillota
TGT
Thr
>WENV182276398
OHUP01001590
235124
Bacillota
TGG
Pro
>WENV182276345
OHUP01000689
338129
Bacillota
TGT
Thr
>WENV182276618
OHUP01016258
157838
Bacillota
GTC
Asp
>WENV182276351
OHUP01000739
144583
Bacillota
ACG
Arg
>WENV182276797
OHUP01050521
419877
Bacillota
TCC
Gly
>WENV182276771
OHUP01044010
235171
Bacillota
CCA
Trp
>WENV182276465
OHUP01003433
238974
Bacillota
GAA
Phe
>WENV182276523
OHUP01005950
144621
Bacillota
GTT
Asn
>WENV182276376
OHUP01001092
144621
Bacillota
GTT
Asn
>WENV182276486
OHUP01004476
58712
Bacillota
CAG
Leu
>WENV182276409
OHUP01001862
58712
Bacillota
CAG
Leu
>WENV182276497
OHUP01005077
245296
Bacillota
CCC
Gly
>WENV182276315
OHUP01000417
245296
Bacillota
CCC
Gly
>WENV182276514
OHUP01005643
299139
Bacillota
TGC
Ala
>WENV182276361
OHUP01000922
144594
Bacillota
CAC
Val
>WENV182276601
OHUP01013891
114075
Bacillota
TAG
Leu
>WENV182276349
OHUP01000704
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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