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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182298837
OHWJ01020231
144612
Bacillota
TCT
Arg
>WENV182298650
OHWJ01002345
235098
Bacillota
GAC
Val
>WENV182298587
OHWJ01000770
338152
Bacillota
TTC
Glu
>WENV182298717
OHWJ01005655
44854
Bacillota
TGA
Ser
>WENV182298692
OHWJ01003929
144577
Bacillota
GAT
Ile
>WENV182298743
OHWJ01007372
238910
Bacillota
CTT
Lys
>WENV182298553
OHWJ01000251
340802
Bacillota
TTG
Gln
>WENV182298831
OHWJ01019385
144668
Bacillota
GTC
Asp
>WENV182298618
OHWJ01001519
429429
Bacillota
CCA
Trp
>WENV182298715
OHWJ01005532
313454
Bacillota
GAA
Phe
>WENV182298681
OHWJ01003245
41154
Bacillota
TAA
Leu
>WENV182298738
OHWJ01007262
11034
Bacillota
GGA
Ser
>WENV182298809
OHWJ01016739
235079
Bacillota
GAA
Phe
>WENV182298691
OHWJ01003929
235087
Bacillota
TGC
Ala
>WENV182298712
OHWJ01005136
245298
Bacillota
CGG
Pro
>WENV182298669
OHWJ01003028
37269
Bacillota
TGA
Ser
>WENV182298586
OHWJ01000770
287000
Bacillota
GTT
Asn
>WENV182298696
OHWJ01004043
152149
Bacillota
GTG
His
>WENV182298759
OHWJ01009134
162445
Bacillota
CAT
Met
>WENV182298713
OHWJ01005167
152492
Bacillota
GGG
Pro
>WENV182298552
OHWJ01000251
144610
Bacillota
GTG
His
>WENV182298711
OHWJ01005136
411547
Bacillota
CTG
Gln
>WENV182298718
OHWJ01005655
4624
Bacillota
GCT
Ser
>WENV182298801
OHWJ01015230
313104
Bacillota
TAC
Val
>WENV182298773
OHWJ01010121
148188
Bacillota
CCG
Arg
>WENV182298779
OHWJ01010876
80612
Bacillota
GTA
Tyr
>WENV182298620
OHWJ01001557
163943
Bacillota
GTC
Asp
>WENV182298814
OHWJ01017547
235124
Bacillota
TGG
Pro
>WENV182298766
OHWJ01009650
144583
Bacillota
ACG
Arg
>WENV182298780
OHWJ01010916
58712
Bacillota
CAG
Leu
>WENV182298551
OHWJ01000251
157635
Bacillota
TCT
Arg
>WENV182298813
OHWJ01017242
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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