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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182423098
OIHA01000308
144612
Bacillota
TCT
Arg
>WENV182423067
OIHA01000054
44854
Bacillota
TGA
Ser
>WENV182423221
OIHA01012300
246023
Bacillota
TGC
Ala
>WENV182423223
OIHA01014275
235137
Bacillota
TGC
Ala
>WENV182423183
OIHA01006450
144668
Bacillota
GTC
Asp
>WENV182423107
OIHA01000347
182792
Bacillota
GTC
Asp
>WENV182423065
OIHA01000047
11034
Bacillota
GGA
Ser
>WENV182423087
OIHA01000192
235079
Bacillota
GAA
Phe
>WENV182423062
OIHA01000038
338149
Bacillota
CTC
Glu
>WENV182423050
OIHA01000017
245298
Bacillota
CGG
Pro
>WENV182423081
OIHA01000123
411547
Bacillota
CTG
Gln
>WENV182423049
OIHA01000017
411547
Bacillota
CTG
Gln
>WENV182423068
OIHA01000054
4624
Bacillota
GCT
Ser
>WENV182423108
OIHA01000347
235095
Bacillota
GGT
Thr
>WENV182423114
OIHA01000429
411549
Bacillota
TTG
Gln
>WENV182423163
OIHA01003564
148188
Bacillota
CCG
Arg
>WENV182423208
OIHA01009886
235127
Bacillota
TTT
Lys
>WENV182423211
OIHA01009915
147674
Bacillota
TCT
Arg
>WENV182423120
OIHA01000549
235124
Bacillota
TGG
Pro
>WENV182423240
OIHA01020073
163753
Bacillota
TGG
Pro
>WENV182423086
OIHA01000183
338129
Bacillota
TGT
Thr
>WENV182423151
OIHA01002190
144583
Bacillota
ACG
Arg
>WENV182423106
OIHA01000347
235171
Bacillota
CCA
Trp
>WENV182423063
OIHA01000038
144621
Bacillota
GTT
Asn
>WENV182423056
OIHA01000029
144621
Bacillota
GTT
Asn
>WENV182423079
OIHA01000101
58712
Bacillota
CAG
Leu
>WENV182423200
OIHA01008735
144762
Bacillota
TCT
Arg
>WENV182423129
OIHA01000737
245296
Bacillota
CCC
Gly
>WENV182423155
OIHA01002691
272992
Bacillota
CTT
Lys
>WENV182423117
OIHA01000508
144594
Bacillota
CAC
Val
>WENV182423088
OIHA01000192
249259
Bacillota
GCC
Gly
>WENV182423110
OIHA01000348
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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