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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183473731
OMES01002573
196621
Bacillota
GTC
Asp
>WENV183473759
OMES01005464
202812
Bacillota
CAT
Met
>WENV183473785
OMES01010025
44854
Bacillota
TGA
Ser
>WENV183473729
OMES01002573
304022
Bacillota
GCC
Gly
>WENV183473720
OMES01002141
11034
Bacillota
GGA
Ser
>WENV183473730
OMES01002573
235117
Bacillota
TAC
Val
>WENV183473748
OMES01003690
235079
Bacillota
GAA
Phe
>WENV183473681
OMES01000598
338149
Bacillota
CTC
Glu
>WENV183473722
OMES01002192
245298
Bacillota
CGG
Pro
>WENV183473803
OMES01012593
169968
Bacillota
CAT
Met
>WENV183473687
OMES01000754
235078
Bacillota
TAC
Val
>WENV183473726
OMES01002452
144610
Bacillota
GTG
His
>WENV183473690
OMES01000754
240017
Bacillota
GCC
Gly
>WENV183473721
OMES01002192
411547
Bacillota
CTG
Gln
>WENV183473732
OMES01002573
235095
Bacillota
GGT
Thr
>WENV183473749
OMES01003798
411549
Bacillota
TTG
Gln
>WENV183473704
OMES01001137
80612
Bacillota
GTA
Tyr
>WENV183473775
OMES01007832
235124
Bacillota
TGG
Pro
>WENV183473713
OMES01001593
144583
Bacillota
ACG
Arg
>WENV183473697
OMES01000984
144652
Bacillota
GTC
Asp
>WENV183473701
OMES01000991
247734
Bacillota
TGC
Ala
>WENV183473723
OMES01002320
144621
Bacillota
GTT
Asn
>WENV183473680
OMES01000553
58712
Bacillota
CAG
Leu
>WENV183473770
OMES01007116
245296
Bacillota
CCC
Gly
>WENV183473682
OMES01000598
272992
Bacillota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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