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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183518078
OMNP01063598
405363
Bacillota
GCA
Cys
>WENV183518033
OMNP01048892
291579
Bacillota
GAA
Phe
>WENV183517881
OMNP01023484
280466
Bacillota
TAC
Val
>WENV183517209
OMNP01000055
280492
Bacillota
CTT
Lys
>WENV183517221
OMNP01000069
280492
Bacillota
CTT
Lys
>WENV183517854
OMNP01020880
29930
Bacillota
GGA
Ser
>WENV183517771
OMNP01013117
184497
Bacillota
GGG
Pro
>WENV183518049
OMNP01054393
298270
Bacillota
TAC
Val
>WENV183517977
OMNP01037564
179563
Bacillota
GAT
Ile
>WENV183517795
OMNP01014527
141334
Bacillota
TAG
Leu
>WENV183517239
OMNP01000097
215243
Bacillota
CAT
Met
>WENV183517719
OMNP01009448
215243
Bacillota
CAT
Met
>WENV183517785
OMNP01014033
190476
Bacillota
CAT
Met
>WENV183517236
OMNP01000086
73664
Bacillota
CAG
Leu
>WENV183517716
OMNP01009331
5692
Bacillota
GCT
Ser
>WENV183517830
OMNP01018240
73009
Bacillota
CAG
Leu
>WENV183517817
OMNP01016201
487804
Bacillota
GGT
Thr
>WENV183517473
OMNP01001697
481217
Bacillota
GCA
Cys
>WENV183517892
OMNP01024079
189473
Bacillota
GAT
Ile
>WENV183518036
OMNP01049639
291581
Bacillota
CGG
Pro
>WENV183517804
OMNP01015169
175859
Bacillota
TCT
Arg
>WENV183517345
OMNP01000335
290325
Bacillota
GCC
Gly
>WENV183517545
OMNP01003273
175831
Bacillota
ACG
Arg
>WENV183517371
OMNP01000515
176223
Bacillota
CAT
Met
>WENV183518035
OMNP01049639
480322
Bacillota
CTG
Gln
>WENV183517628
OMNP01006112
322848
Bacillota
CTT
Lys
>WENV183517627
OMNP01006112
398854
Bacillota
CTC
Glu
>WENV183518058
OMNP01056964
291576
Bacillota
CCC
Gly
>WENV183518042
OMNP01050710
480324
Bacillota
TTG
Gln
>WENV183517215
OMNP01000058
56079
Bacillota
AAG
Leu
>WENV183517592
OMNP01004615
56079
Bacillota
AAG
Leu
>WENV183517717
OMNP01009369
323864
Bacillota
TGC
Ala
>WENV183517258
OMNP01000128
117745
Bacillota
GTA
Tyr
>WENV183517497
OMNP01002274
280444
Bacillota
GGT
Thr
>WENV183517336
OMNP01000312
46643
Bacillota
TGA
Ser
>WENV183517527
OMNP01002878
179755
Bacillota
CCG
Arg
>WENV183517884
OMNP01023484
127792
Bacillota
TAG
Leu
>WENV183517786
OMNP01014033
398832
Bacillota
TTC
Glu
>WENV183517996
OMNP01040665
282755
Bacillota
GGT
Thr
>WENV183517643
OMNP01006482
332651
Bacillota
GTT
Asn
>WENV183517364
OMNP01000483
280462
Bacillota
GAA
Phe
>WENV183517207
OMNP01000054
398852
Bacillota
CTC
Glu
>WENV183517222
OMNP01000070
398852
Bacillota
CTC
Glu
>WENV183517259
OMNP01000128
398852
Bacillota
CTC
Glu
>WENV183517554
OMNP01003479
309916
Bacillota
TTT
Lys
>WENV183517515
OMNP01002637
280483
Bacillota
GAA
Phe
>WENV183517315
OMNP01000234
175857
Bacillota
GTG
His
>WENV183517516
OMNP01002637
285756
Bacillota
GCC
Gly
>WENV183517715
OMNP01009331
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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