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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
60 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV084532
BABA01001480
172207
Bacteroidota
GGG
Pro
>WENV084647
BABA01005844
172207
Bacteroidota
GGG
Pro
>WENV084760
BABA01012705
172207
Bacteroidota
GGG
Pro
>WENV084850
BABA01022374
172207
Bacteroidota
GGG
Pro
>WENV084504
BABA01000762
295385
Bacteroidota
CCA
Trp
>WENV084561
BABA01002816
398829
Bacteroidota
CCT
Arg
>WENV084827
BABA01018396
398829
Bacteroidota
CCT
Arg
>WENV084930
BABA01032694
398829
Bacteroidota
CCT
Arg
>WENV084766
BABA01012977
404226
Bacteroidota
CCT
Arg
>WENV084847
BABA01021260
175904
Bacteroidota
CGG
Pro
>WENV084585
BABA01003769
280553
Bacteroidota
TTT
Lys
>WENV084923
BABA01031251
280553
Bacteroidota
TTT
Lys
>WENV084505
BABA01000884
280557
Bacteroidota
CAT
Met
>WENV084807
BABA01015573
20492
Bacteroidota
GGA
Ser
>WENV084610
BABA01004433
398871
Bacteroidota
TTC
Glu
>WENV084563
BABA01002836
201819
Bacteroidota
CAT
Met
>WENV084546
BABA01001884
56493
Bacteroidota
TGA
Ser
>WENV084554
BABA01002242
175906
Bacteroidota
GTG
His
>WENV084555
BABA01002242
175906
Bacteroidota
GTG
His
>WENV084627
BABA01005193
175903
Bacteroidota
GTG
His
>WENV084524
BABA01001332
351598
Bacteroidota
CGG
Pro
>WENV084593
BABA01004039
351598
Bacteroidota
CGG
Pro
>WENV084911
BABA01029716
351598
Bacteroidota
CGG
Pro
>WENV084723
BABA01010355
398872
Bacteroidota
GGT
Thr
>WENV084522
BABA01001268
175908
Bacteroidota
GTC
Asp
>WENV084630
BABA01005264
280530
Bacteroidota
CCA
Trp
>WENV084484
BABA01000288
175936
Bacteroidota
CAT
Met
>WENV084654
BABA01006137
203954
Bacteroidota
GTC
Asp
>WENV084655
BABA01006137
203954
Bacteroidota
GTC
Asp
>WENV084703
BABA01009269
178907
Bacteroidota
TCT
Arg
>WENV084584
BABA01003709
20449
Bacteroidota
GGA
Ser
>WENV084928
BABA01032352
175902
Bacteroidota
GGC
Ala
>WENV084619
BABA01004689
398860
Bacteroidota
CTC
Glu
>WENV084479
BABA01000192
480404
Bacteroidota
TTG
Gln
>WENV084531
BABA01001466
99847
Bacteroidota
GTA
Tyr
>WENV084714
BABA01009961
99847
Bacteroidota
GTA
Tyr
>WENV084722
BABA01010355
99847
Bacteroidota
GTA
Tyr
>WENV084884
BABA01027392
399200
Bacteroidota
CAT
Met
>WENV084829
BABA01018524
488746
Bacteroidota
CTG
Gln
>WENV084887
BABA01027961
280478
Bacteroidota
GCC
Gly
>WENV084574
BABA01003308
27524
Bacteroidota
GGA
Ser
>WENV084888
BABA01027961
74084
Bacteroidota
CAG
Leu
>WENV084769
BABA01013190
176192
Bacteroidota
TCT
Arg
>WENV084750
BABA01011887
400088
Bacteroidota
GGT
Thr
>WENV084623
BABA01005062
69204
Bacteroidota
TGA
Ser
>WENV084633
BABA01005554
69204
Bacteroidota
TGA
Ser
>WENV084466
BABA01000116
280446
Bacteroidota
TTT
Lys
>WENV084515
BABA01001143
280446
Bacteroidota
TTT
Lys
>WENV084777
BABA01013605
280446
Bacteroidota
TTT
Lys
>WENV084502
BABA01000742
484496
Bacteroidota
TTG
Gln
>WENV084784
BABA01014189
484496
Bacteroidota
TTG
Gln
>WENV084516
BABA01001152
27502
Bacteroidota
GGA
Ser
>WENV084589
BABA01003813
27502
Bacteroidota
GGA
Ser
>WENV084929
BABA01032547
117804
Bacteroidota
TAG
Leu
>WENV084549
BABA01002022
365112
Bacteroidota
TTT
Lys
>WENV084626
BABA01005183
365112
Bacteroidota
TTT
Lys
>WENV084621
BABA01005025
398836
Bacteroidota
GCA
Cys
>WENV084490
BABA01000449
398836
Bacteroidota
GCA
Cys
>WENV084557
BABA01002417
398836
Bacteroidota
GCA
Cys
>WENV084705
BABA01009660
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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