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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
97 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170060485
CDZI01005627
117741
Bacteroidota
TAG
Leu
>WENV170060868
CDZI01024155
398829
Bacteroidota
CCT
Arg
>WENV170061040
CDZI01031627
175838
Bacteroidota
GTT
Asn
>WENV170061041
CDZI01031627
175838
Bacteroidota
GTT
Asn
>WENV170061372
CDZI01045579
175904
Bacteroidota
CGG
Pro
>WENV170061449
CDZI01050136
175904
Bacteroidota
CGG
Pro
>WENV170061732
CDZI01061479
175904
Bacteroidota
CGG
Pro
>WENV170060633
CDZI01012262
400161
Bacteroidota
GGT
Thr
>WENV170060841
CDZI01022318
400161
Bacteroidota
GGT
Thr
>WENV170061865
CDZI01068127
400161
Bacteroidota
GGT
Thr
>WENV170060578
CDZI01009280
289031
Bacteroidota
CAT
Met
>WENV170061119
CDZI01035034
289031
Bacteroidota
CAT
Met
>WENV170061686
CDZI01059238
289031
Bacteroidota
CAT
Met
>WENV170060799
CDZI01020141
156422
Bacteroidota
TAC
Val
>WENV170060526
CDZI01006891
280557
Bacteroidota
CAT
Met
>WENV170060885
CDZI01024762
280557
Bacteroidota
CAT
Met
>WENV170060924
CDZI01025911
20492
Bacteroidota
GGA
Ser
>WENV170060376
CDZI01002202
20206
Bacteroidota
GGA
Ser
>WENV170060609
CDZI01010418
483416
Bacteroidota
CTG
Gln
>WENV170061530
CDZI01053925
483416
Bacteroidota
CTG
Gln
>WENV170060697
CDZI01014061
201819
Bacteroidota
CAT
Met
>WENV170061700
CDZI01060369
201819
Bacteroidota
CAT
Met
>WENV170060912
CDZI01025567
118221
Bacteroidota
CAA
Leu
>WENV170060714
CDZI01014744
56493
Bacteroidota
TGA
Ser
>WENV170060862
CDZI01024027
56493
Bacteroidota
TGA
Ser
>WENV170061380
CDZI01046091
56493
Bacteroidota
TGA
Ser
>WENV170061664
CDZI01058669
56493
Bacteroidota
TGA
Ser
>WENV170060400
CDZI01002861
175903
Bacteroidota
GTG
His
>WENV170060409
CDZI01003387
351598
Bacteroidota
CGG
Pro
>WENV170060620
CDZI01011699
351598
Bacteroidota
CGG
Pro
>WENV170061872
CDZI01068633
351598
Bacteroidota
CGG
Pro
>WENV170061244
CDZI01040275
178907
Bacteroidota
TCT
Arg
>WENV170060800
CDZI01020141
172085
Bacteroidota
TAC
Val
>WENV170061303
CDZI01042152
172085
Bacteroidota
TAC
Val
>WENV170061536
CDZI01053932
172085
Bacteroidota
TAC
Val
>WENV170061748
CDZI01062723
405877
Bacteroidota
GGT
Thr
>WENV170061110
CDZI01034519
56385
Bacteroidota
TGA
Ser
>WENV170061900
CDZI01069483
56385
Bacteroidota
TGA
Ser
>WENV170061866
CDZI01068127
312035
Bacteroidota
CCA
Trp
>WENV170061888
CDZI01069170
178133
Bacteroidota
GAT
Ile
>WENV170061122
CDZI01035041
242241
Bacteroidota
GTC
Asp
>WENV170061123
CDZI01035041
242241
Bacteroidota
GTC
Asp
>WENV170061638
CDZI01057574
242241
Bacteroidota
GTC
Asp
>WENV170061639
CDZI01057574
242241
Bacteroidota
GTC
Asp
>WENV170060935
CDZI01026452
21127
Bacteroidota
GGA
Ser
>WENV170061903
CDZI01069763
57807
Bacteroidota
TGA
Ser
>WENV170060654
CDZI01012889
175902
Bacteroidota
GGC
Ala
>WENV170061753
CDZI01062878
280451
Bacteroidota
CGT
Thr
>WENV170061170
CDZI01036862
99847
Bacteroidota
GTA
Tyr
>WENV170061309
CDZI01042704
99847
Bacteroidota
GTA
Tyr
>WENV170060473
CDZI01005012
399200
Bacteroidota
CAT
Met
>WENV170061287
CDZI01041526
404109
Bacteroidota
CTC
Glu
>WENV170061288
CDZI01041526
404109
Bacteroidota
CTC
Glu
>WENV170061399
CDZI01046747
404109
Bacteroidota
CTC
Glu
>WENV170061140
CDZI01036255
186874
Bacteroidota
CAT
Met
>WENV170061334
CDZI01043963
186874
Bacteroidota
CAT
Met
>WENV170061800
CDZI01064654
115044
Bacteroidota
GTA
Tyr
>WENV170061917
CDZI01069996
115044
Bacteroidota
GTA
Tyr
>WENV170061229
CDZI01040255
46648
Bacteroidota
TAA
Leu
>WENV170061538
CDZI01053934
46648
Bacteroidota
TAA
Leu
>WENV170061018
CDZI01030473
488746
Bacteroidota
CTG
Gln
>WENV170060507
CDZI01006346
118432
Bacteroidota
CAG
Leu
>WENV170060510
CDZI01006346
118432
Bacteroidota
CAG
Leu
>WENV170061869
CDZI01068422
280478
Bacteroidota
GCC
Gly
>WENV170060382
CDZI01002626
186108
Bacteroidota
GTT
Asn
>WENV170061947
CDZI01071062
186108
Bacteroidota
GTT
Asn
>WENV170061962
CDZI01072000
187400
Bacteroidota
GTT
Asn
>WENV170061034
CDZI01031273
175844
Bacteroidota
GGC
Ala
>WENV170060418
CDZI01003864
183889
Bacteroidota
GGC
Ala
>WENV170060675
CDZI01013522
183889
Bacteroidota
GGC
Ala
>WENV170061343
CDZI01044574
183889
Bacteroidota
GGC
Ala
>WENV170061439
CDZI01049596
183889
Bacteroidota
GGC
Ala
>WENV170061277
CDZI01041505
186142
Bacteroidota
GAT
Ile
>WENV170061260
CDZI01040894
398828
Bacteroidota
CCG
Arg
>WENV170061858
CDZI01067557
398828
Bacteroidota
CCG
Arg
>WENV170060920
CDZI01025897
191205
Bacteroidota
TGG
Pro
>WENV170060921
CDZI01025897
191205
Bacteroidota
TGG
Pro
>WENV170060922
CDZI01025897
191205
Bacteroidota
TGG
Pro
>WENV170060923
CDZI01025897
191205
Bacteroidota
TGG
Pro
>WENV170061625
CDZI01056986
191205
Bacteroidota
TGG
Pro
>WENV170061626
CDZI01056986
191205
Bacteroidota
TGG
Pro
>WENV170060879
CDZI01024615
140771
Bacteroidota
>WENV170061401
CDZI01047308
176192
Bacteroidota
TCT
Arg
>WENV170061231
CDZI01040255
481328
Bacteroidota
TTG
Gln
>WENV170061847
CDZI01066963
491385
Bacteroidota
TTG
Gln
>WENV170060873
CDZI01024445
484496
Bacteroidota
TTG
Gln
>WENV170061751
CDZI01062875
484496
Bacteroidota
TTG
Gln
>WENV170061827
CDZI01065904
484496
Bacteroidota
TTG
Gln
>WENV170061886
CDZI01068859
27502
Bacteroidota
GGA
Ser
>WENV170061301
CDZI01042117
188555
Bacteroidota
CAT
Met
>WENV170061278
CDZI01041505
186143
Bacteroidota
TGC
Ala
>WENV170060713
CDZI01014742
365112
Bacteroidota
TTT
Lys
>WENV170061489
CDZI01051348
365112
Bacteroidota
TTT
Lys
>WENV170061520
CDZI01053243
365112
Bacteroidota
TTT
Lys
>WENV170060534
CDZI01007103
398836
Bacteroidota
GCA
Cys
>WENV170061610
CDZI01056393
398836
Bacteroidota
GCA
Cys
>WENV170061485
CDZI01051334
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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