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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170081155
CDZY01006933
172207
Bacteroidota
GGG
Pro
>WENV170082487
CDZY01055501
172207
Bacteroidota
GGG
Pro
>WENV170082553
CDZY01058258
172207
Bacteroidota
GGG
Pro
>WENV170081328
CDZY01011845
117741
Bacteroidota
TAG
Leu
>WENV170081348
CDZY01012822
398829
Bacteroidota
CCT
Arg
>WENV170081563
CDZY01020105
398829
Bacteroidota
CCT
Arg
>WENV170081973
CDZY01034114
175838
Bacteroidota
GTT
Asn
>WENV170081974
CDZY01034114
175838
Bacteroidota
GTT
Asn
>WENV170081975
CDZY01034114
175838
Bacteroidota
GTT
Asn
>WENV170082072
CDZY01037322
175838
Bacteroidota
GTT
Asn
>WENV170082073
CDZY01037322
175838
Bacteroidota
GTT
Asn
>WENV170081357
CDZY01012909
175904
Bacteroidota
CGG
Pro
>WENV170082032
CDZY01036348
289031
Bacteroidota
CAT
Met
>WENV170081452
CDZY01016397
280557
Bacteroidota
CAT
Met
>WENV170081595
CDZY01020985
280557
Bacteroidota
CAT
Met
>WENV170081706
CDZY01025105
280557
Bacteroidota
CAT
Met
>WENV170081613
CDZY01021972
20492
Bacteroidota
GGA
Ser
>WENV170081130
CDZY01005537
20206
Bacteroidota
GGA
Ser
>WENV170082413
CDZY01052863
483416
Bacteroidota
CTG
Gln
>WENV170081107
CDZY01004261
282712
Bacteroidota
TTT
Lys
>WENV170082360
CDZY01050999
201819
Bacteroidota
CAT
Met
>WENV170082361
CDZY01050999
201819
Bacteroidota
CAT
Met
>WENV170081424
CDZY01015155
56493
Bacteroidota
TGA
Ser
>WENV170081425
CDZY01015155
175903
Bacteroidota
GTG
His
>WENV170081894
CDZY01032200
351598
Bacteroidota
CGG
Pro
>WENV170081897
CDZY01032207
351598
Bacteroidota
CGG
Pro
>WENV170082070
CDZY01037322
351598
Bacteroidota
CGG
Pro
>WENV170082204
CDZY01043606
351598
Bacteroidota
CGG
Pro
>WENV170082286
CDZY01046671
351598
Bacteroidota
CGG
Pro
>WENV170082350
CDZY01050569
351598
Bacteroidota
CGG
Pro
>WENV170081383
CDZY01013796
118089
Bacteroidota
TAG
Leu
>WENV170081489
CDZY01017748
398872
Bacteroidota
GGT
Thr
>WENV170081042
CDZY01001904
29791
Bacteroidota
GCT
Ser
>WENV170081038
CDZY01001894
21127
Bacteroidota
GGA
Ser
>WENV170081850
CDZY01030763
56072
Bacteroidota
TAA
Leu
>WENV170081790
CDZY01028317
175902
Bacteroidota
GGC
Ala
>WENV170081043
CDZY01001904
398860
Bacteroidota
CTC
Glu
>WENV170081674
CDZY01023822
398860
Bacteroidota
CTC
Glu
>WENV170081868
CDZY01031703
480404
Bacteroidota
TTG
Gln
>WENV170082467
CDZY01054654
280451
Bacteroidota
CGT
Thr
>WENV170081076
CDZY01003312
99847
Bacteroidota
GTA
Tyr
>WENV170081150
CDZY01006919
99847
Bacteroidota
GTA
Tyr
>WENV170081160
CDZY01007280
99847
Bacteroidota
GTA
Tyr
>WENV170081488
CDZY01017748
99847
Bacteroidota
GTA
Tyr
>WENV170081629
CDZY01022862
99847
Bacteroidota
GTA
Tyr
>WENV170082067
CDZY01037322
99847
Bacteroidota
GTA
Tyr
>WENV170081229
CDZY01009828
399200
Bacteroidota
CAT
Met
>WENV170082269
CDZY01045749
186874
Bacteroidota
CAT
Met
>WENV170082373
CDZY01051414
488746
Bacteroidota
CTG
Gln
>WENV170081830
CDZY01029512
399026
Bacteroidota
CCT
Arg
>WENV170082094
CDZY01037815
280478
Bacteroidota
GCC
Gly
>WENV170082441
CDZY01053408
280478
Bacteroidota
GCC
Gly
>WENV170082278
CDZY01046211
27524
Bacteroidota
GGA
Ser
>WENV170081621
CDZY01022115
175844
Bacteroidota
GGC
Ala
>WENV170082552
CDZY01058258
480318
Bacteroidota
CTG
Gln
>WENV170082111
CDZY01040210
186142
Bacteroidota
GAT
Ile
>WENV170082363
CDZY01050999
398828
Bacteroidota
CCG
Arg
>WENV170082464
CDZY01054311
159415
Bacteroidota
TAC
Val
>WENV170082465
CDZY01054311
159415
Bacteroidota
TAC
Val
>WENV170081051
CDZY01002364
140771
Bacteroidota
>WENV170081054
CDZY01002364
140771
Bacteroidota
>WENV170081642
CDZY01023350
140771
Bacteroidota
>WENV170081645
CDZY01023350
140771
Bacteroidota
>WENV170081648
CDZY01023350
140771
Bacteroidota
>WENV170081650
CDZY01023350
140771
Bacteroidota
>WENV170082047
CDZY01036750
176192
Bacteroidota
TCT
Arg
>WENV170082344
CDZY01049645
176192
Bacteroidota
TCT
Arg
>WENV170081100
CDZY01004197
69204
Bacteroidota
TGA
Ser
>WENV170082219
CDZY01044796
69204
Bacteroidota
TGA
Ser
>WENV170082225
CDZY01044798
69204
Bacteroidota
TGA
Ser
>WENV170082277
CDZY01046211
69204
Bacteroidota
TGA
Ser
>WENV170081451
CDZY01016397
280446
Bacteroidota
TTT
Lys
>WENV170082488
CDZY01055501
280446
Bacteroidota
TTT
Lys
>WENV170081442
CDZY01016013
484496
Bacteroidota
TTG
Gln
>WENV170081461
CDZY01016875
484496
Bacteroidota
TTG
Gln
>WENV170082169
CDZY01042105
484496
Bacteroidota
TTG
Gln
>WENV170081747
CDZY01026435
27502
Bacteroidota
GGA
Ser
>WENV170081991
CDZY01034967
27502
Bacteroidota
GGA
Ser
>WENV170082188
CDZY01043065
27502
Bacteroidota
GGA
Ser
>WENV170082364
CDZY01051001
27502
Bacteroidota
GGA
Ser
>WENV170082112
CDZY01040210
186143
Bacteroidota
TGC
Ala
>WENV170081652
CDZY01023352
365112
Bacteroidota
TTT
Lys
>WENV170081672
CDZY01023822
365112
Bacteroidota
TTT
Lys
>WENV170081769
CDZY01027740
365112
Bacteroidota
TTT
Lys
>WENV170082039
CDZY01036364
365112
Bacteroidota
TTT
Lys
>WENV170082206
CDZY01043881
365112
Bacteroidota
TTT
Lys
>WENV170082505
CDZY01056325
365112
Bacteroidota
TTT
Lys
>WENV170081330
CDZY01012329
398836
Bacteroidota
GCA
Cys
>WENV170081498
CDZY01018257
398836
Bacteroidota
GCA
Cys
>WENV170081510
CDZY01018270
398836
Bacteroidota
GCA
Cys
>WENV170081523
CDZY01018695
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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