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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
107 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170086477
CEAC01009728
172207
Bacteroidota
GGG
Pro
>WENV170086510
CEAC01010368
172207
Bacteroidota
GGG
Pro
>WENV170087305
CEAC01039239
172207
Bacteroidota
GGG
Pro
>WENV170087089
CEAC01030818
117741
Bacteroidota
TAG
Leu
>WENV170087245
CEAC01036670
398829
Bacteroidota
CCT
Arg
>WENV170086603
CEAC01013906
175838
Bacteroidota
GTT
Asn
>WENV170086604
CEAC01013906
175838
Bacteroidota
GTT
Asn
>WENV170087008
CEAC01028743
175838
Bacteroidota
GTT
Asn
>WENV170087009
CEAC01028743
175838
Bacteroidota
GTT
Asn
>WENV170086319
CEAC01004044
404226
Bacteroidota
CCT
Arg
>WENV170086639
CEAC01015192
175904
Bacteroidota
CGG
Pro
>WENV170087225
CEAC01036294
289031
Bacteroidota
CAT
Met
>WENV170087293
CEAC01038700
289031
Bacteroidota
CAT
Met
>WENV170087307
CEAC01039500
280553
Bacteroidota
TTT
Lys
>WENV170086625
CEAC01015112
280557
Bacteroidota
CAT
Met
>WENV170087262
CEAC01037407
280557
Bacteroidota
CAT
Met
>WENV170087321
CEAC01040121
280557
Bacteroidota
CAT
Met
>WENV170087322
CEAC01040121
280557
Bacteroidota
CAT
Met
>WENV170086601
CEAC01013899
20206
Bacteroidota
GGA
Ser
>WENV170086846
CEAC01023129
483416
Bacteroidota
CTG
Gln
>WENV170086231
CEAC01000956
201819
Bacteroidota
CAT
Met
>WENV170086571
CEAC01012963
56493
Bacteroidota
TGA
Ser
>WENV170086903
CEAC01025475
56493
Bacteroidota
TGA
Ser
>WENV170087215
CEAC01036288
56493
Bacteroidota
TGA
Ser
>WENV170086351
CEAC01005616
175903
Bacteroidota
GTG
His
>WENV170087369
CEAC01041220
175903
Bacteroidota
GTG
His
>WENV170086363
CEAC01006185
351598
Bacteroidota
CGG
Pro
>WENV170086687
CEAC01017445
351598
Bacteroidota
CGG
Pro
>WENV170086787
CEAC01021244
351598
Bacteroidota
CGG
Pro
>WENV170087162
CEAC01033861
351598
Bacteroidota
CGG
Pro
>WENV170086766
CEAC01020926
156068
Bacteroidota
TAC
Val
>WENV170086767
CEAC01020926
156068
Bacteroidota
TAC
Val
>WENV170086785
CEAC01021243
156068
Bacteroidota
TAC
Val
>WENV170087120
CEAC01032054
156068
Bacteroidota
TAC
Val
>WENV170086262
CEAC01002108
118089
Bacteroidota
TAG
Leu
>WENV170086327
CEAC01004541
157895
Bacteroidota
TAC
Val
>WENV170086328
CEAC01004541
157895
Bacteroidota
TAC
Val
>WENV170087269
CEAC01037410
157895
Bacteroidota
TAC
Val
>WENV170087270
CEAC01037410
157895
Bacteroidota
TAC
Val
>WENV170086378
CEAC01006751
178907
Bacteroidota
TCT
Arg
>WENV170086301
CEAC01003635
172085
Bacteroidota
TAC
Val
>WENV170086302
CEAC01003635
172085
Bacteroidota
TAC
Val
>WENV170086303
CEAC01003635
172085
Bacteroidota
TAC
Val
>WENV170086808
CEAC01021915
405877
Bacteroidota
GGT
Thr
>WENV170086724
CEAC01019879
29791
Bacteroidota
GCT
Ser
>WENV170087348
CEAC01040836
182267
Bacteroidota
GTT
Asn
>WENV170087349
CEAC01040836
182267
Bacteroidota
GTT
Asn
>WENV170087350
CEAC01040836
182267
Bacteroidota
GTT
Asn
>WENV170087351
CEAC01040836
182267
Bacteroidota
GTT
Asn
>WENV170086421
CEAC01008057
178133
Bacteroidota
GAT
Ile
>WENV170086221
CEAC01000422
21127
Bacteroidota
GGA
Ser
>WENV170086715
CEAC01019341
21127
Bacteroidota
GGA
Ser
>WENV170086218
CEAC01000341
56072
Bacteroidota
TAA
Leu
>WENV170087244
CEAC01036670
56072
Bacteroidota
TAA
Leu
>WENV170087175
CEAC01034360
175886
Bacteroidota
GGC
Ala
>WENV170087339
CEAC01040485
175886
Bacteroidota
GGC
Ala
>WENV170086342
CEAC01005250
175902
Bacteroidota
GGC
Ala
>WENV170086397
CEAC01007134
175902
Bacteroidota
GGC
Ala
>WENV170087205
CEAC01035659
179697
Bacteroidota
TGT
Thr
>WENV170086725
CEAC01019879
398860
Bacteroidota
CTC
Glu
>WENV170087236
CEAC01036663
280451
Bacteroidota
CGT
Thr
>WENV170086382
CEAC01006805
418894
Bacteroidota
TTC
Glu
>WENV170086383
CEAC01006805
418894
Bacteroidota
TTC
Glu
>WENV170086535
CEAC01011294
99847
Bacteroidota
GTA
Tyr
>WENV170087011
CEAC01028743
99847
Bacteroidota
GTA
Tyr
>WENV170086806
CEAC01021893
399200
Bacteroidota
CAT
Met
>WENV170087063
CEAC01029749
399200
Bacteroidota
CAT
Met
>WENV170086957
CEAC01027762
186874
Bacteroidota
CAT
Met
>WENV170087104
CEAC01031406
186874
Bacteroidota
CAT
Met
>WENV170087304
CEAC01039239
488746
Bacteroidota
CTG
Gln
>WENV170086758
CEAC01020566
187400
Bacteroidota
GTT
Asn
>WENV170086801
CEAC01021582
187400
Bacteroidota
GTT
Asn
>WENV170087170
CEAC01034338
187400
Bacteroidota
GTT
Asn
>WENV170087171
CEAC01034338
187400
Bacteroidota
GTT
Asn
>WENV170087172
CEAC01034338
187400
Bacteroidota
GTT
Asn
>WENV170087004
CEAC01028693
175844
Bacteroidota
GGC
Ala
>WENV170086315
CEAC01004012
280515
Bacteroidota
CCA
Trp
>WENV170086480
CEAC01009929
183889
Bacteroidota
GGC
Ala
>WENV170087220
CEAC01036289
372845
Bacteroidota
CCA
Trp
>WENV170087352
CEAC01040837
186142
Bacteroidota
GAT
Ile
>WENV170086447
CEAC01008712
398828
Bacteroidota
CCG
Arg
>WENV170086936
CEAC01027165
74084
Bacteroidota
CAG
Leu
>WENV170086573
CEAC01012963
140771
Bacteroidota
>WENV170086576
CEAC01012963
140771
Bacteroidota
>WENV170086970
CEAC01028051
140771
Bacteroidota
>WENV170086973
CEAC01028051
140771
Bacteroidota
>WENV170086976
CEAC01028051
140771
Bacteroidota
>WENV170087081
CEAC01030520
69204
Bacteroidota
TGA
Ser
>WENV170087280
CEAC01037762
69204
Bacteroidota
TGA
Ser
>WENV170086379
CEAC01006798
280446
Bacteroidota
TTT
Lys
>WENV170086684
CEAC01017444
280446
Bacteroidota
TTT
Lys
>WENV170087131
CEAC01032366
280446
Bacteroidota
TTT
Lys
>WENV170086674
CEAC01017031
484496
Bacteroidota
TTG
Gln
>WENV170086859
CEAC01023682
484496
Bacteroidota
TTG
Gln
>WENV170087132
CEAC01032375
484496
Bacteroidota
TTG
Gln
>WENV170086295
CEAC01003375
27502
Bacteroidota
GGA
Ser
>WENV170087370
CEAC01041220
27502
Bacteroidota
GGA
Ser
>WENV170086472
CEAC01009722
373714
Bacteroidota
GCC
Gly
>WENV170086473
CEAC01009722
373714
Bacteroidota
GCC
Gly
>WENV170087176
CEAC01034360
188555
Bacteroidota
CAT
Met
>WENV170087353
CEAC01040837
186143
Bacteroidota
TGC
Ala
>WENV170086465
CEAC01009350
365112
Bacteroidota
TTT
Lys
>WENV170086533
CEAC01011294
365112
Bacteroidota
TTT
Lys
>WENV170087299
CEAC01039180
365112
Bacteroidota
TTT
Lys
>WENV170086357
CEAC01005975
398836
Bacteroidota
GCA
Cys
>WENV170086429
CEAC01008085
398836
Bacteroidota
GCA
Cys
>WENV170086430
CEAC01008085
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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