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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
102 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170087402
CEAD01001707
172207
Bacteroidota
GGG
Pro
>WENV170087699
CEAD01016272
172207
Bacteroidota
GGG
Pro
>WENV170087888
CEAD01025428
172207
Bacteroidota
GGG
Pro
>WENV170087943
CEAD01028286
172207
Bacteroidota
GGG
Pro
>WENV170088097
CEAD01035086
172207
Bacteroidota
GGG
Pro
>WENV170088092
CEAD01034903
117741
Bacteroidota
TAG
Leu
>WENV170087622
CEAD01012150
398829
Bacteroidota
CCT
Arg
>WENV170087678
CEAD01015611
398829
Bacteroidota
CCT
Arg
>WENV170087492
CEAD01005482
175838
Bacteroidota
GTT
Asn
>WENV170087639
CEAD01013386
175904
Bacteroidota
CGG
Pro
>WENV170087750
CEAD01019319
289031
Bacteroidota
CAT
Met
>WENV170087562
CEAD01008961
280557
Bacteroidota
CAT
Met
>WENV170088216
CEAD01039703
280557
Bacteroidota
CAT
Met
>WENV170088217
CEAD01039703
280557
Bacteroidota
CAT
Met
>WENV170088218
CEAD01039703
280557
Bacteroidota
CAT
Met
>WENV170088219
CEAD01039703
280557
Bacteroidota
CAT
Met
>WENV170088215
CEAD01039695
20206
Bacteroidota
GGA
Ser
>WENV170088134
CEAD01036783
483416
Bacteroidota
CTG
Gln
>WENV170087461
CEAD01004340
282712
Bacteroidota
TTT
Lys
>WENV170088083
CEAD01034634
201819
Bacteroidota
CAT
Met
>WENV170088075
CEAD01034329
56493
Bacteroidota
TGA
Ser
>WENV170088120
CEAD01036182
56493
Bacteroidota
TGA
Ser
>WENV170088172
CEAD01038038
56493
Bacteroidota
TGA
Ser
>WENV170087457
CEAD01004168
175903
Bacteroidota
GTG
His
>WENV170087529
CEAD01006991
351598
Bacteroidota
CGG
Pro
>WENV170087709
CEAD01016587
351598
Bacteroidota
CGG
Pro
>WENV170087784
CEAD01020270
351598
Bacteroidota
CGG
Pro
>WENV170087986
CEAD01029824
351598
Bacteroidota
CGG
Pro
>WENV170088182
CEAD01038321
351598
Bacteroidota
CGG
Pro
>WENV170087951
CEAD01028858
291612
Bacteroidota
>WENV170088006
CEAD01030812
118089
Bacteroidota
TAG
Leu
>WENV170087771
CEAD01019968
203954
Bacteroidota
GTC
Asp
>WENV170087831
CEAD01022520
203954
Bacteroidota
GTC
Asp
>WENV170087984
CEAD01029814
172085
Bacteroidota
TAC
Val
>WENV170088084
CEAD01034640
172085
Bacteroidota
TAC
Val
>WENV170088085
CEAD01034640
172085
Bacteroidota
TAC
Val
>WENV170087598
CEAD01010537
182267
Bacteroidota
GTT
Asn
>WENV170087599
CEAD01010537
182267
Bacteroidota
GTT
Asn
>WENV170088235
CEAD01040343
20449
Bacteroidota
GGA
Ser
>WENV170088238
CEAD01040344
20449
Bacteroidota
GGA
Ser
>WENV170087614
CEAD01011561
56072
Bacteroidota
TAA
Leu
>WENV170088194
CEAD01038664
56072
Bacteroidota
TAA
Leu
>WENV170087793
CEAD01020605
175886
Bacteroidota
GGC
Ala
>WENV170088060
CEAD01033012
175902
Bacteroidota
GGC
Ala
>WENV170087494
CEAD01005482
99847
Bacteroidota
GTA
Tyr
>WENV170087655
CEAD01014060
99847
Bacteroidota
GTA
Tyr
>WENV170087538
CEAD01007349
399200
Bacteroidota
CAT
Met
>WENV170088039
CEAD01032389
399200
Bacteroidota
CAT
Met
>WENV170087527
CEAD01006719
186874
Bacteroidota
CAT
Met
>WENV170087764
CEAD01019647
488746
Bacteroidota
CTG
Gln
>WENV170087906
CEAD01026017
280478
Bacteroidota
GCC
Gly
>WENV170087947
CEAD01028584
280478
Bacteroidota
GCC
Gly
>WENV170087949
CEAD01028584
280478
Bacteroidota
GCC
Gly
>WENV170088103
CEAD01035545
280478
Bacteroidota
GCC
Gly
>WENV170088105
CEAD01035545
280478
Bacteroidota
GCC
Gly
>WENV170087471
CEAD01004809
186108
Bacteroidota
GTT
Asn
>WENV170087472
CEAD01004809
186108
Bacteroidota
GTT
Asn
>WENV170087608
CEAD01011214
175844
Bacteroidota
GGC
Ala
>WENV170087893
CEAD01025643
280515
Bacteroidota
CCA
Trp
>WENV170087861
CEAD01024112
183889
Bacteroidota
GGC
Ala
>WENV170087624
CEAD01012465
186142
Bacteroidota
GAT
Ile
>WENV170087904
CEAD01026004
398828
Bacteroidota
CCG
Arg
>WENV170087432
CEAD01003586
140771
Bacteroidota
>WENV170087435
CEAD01003586
140771
Bacteroidota
>WENV170087438
CEAD01003586
140771
Bacteroidota
>WENV170087702
CEAD01016501
140771
Bacteroidota
>WENV170087705
CEAD01016501
140771
Bacteroidota
>WENV170088174
CEAD01038038
140771
Bacteroidota
>WENV170088177
CEAD01038038
140771
Bacteroidota
>WENV170088230
CEAD01040332
140771
Bacteroidota
>WENV170088232
CEAD01040332
140771
Bacteroidota
>WENV170087413
CEAD01002278
176192
Bacteroidota
TCT
Arg
>WENV170087991
CEAD01030405
400088
Bacteroidota
GGT
Thr
>WENV170087476
CEAD01005096
69204
Bacteroidota
TGA
Ser
>WENV170087512
CEAD01006481
69204
Bacteroidota
TGA
Ser
>WENV170087583
CEAD01009827
69204
Bacteroidota
TGA
Ser
>WENV170087597
CEAD01010534
69204
Bacteroidota
TGA
Ser
>WENV170088028
CEAD01031730
69204
Bacteroidota
TGA
Ser
>WENV170088076
CEAD01034329
69204
Bacteroidota
TGA
Ser
>WENV170088108
CEAD01035749
69204
Bacteroidota
TGA
Ser
>WENV170087929
CEAD01027330
280446
Bacteroidota
TTT
Lys
>WENV170087938
CEAD01027739
280446
Bacteroidota
TTT
Lys
>WENV170087970
CEAD01029200
280446
Bacteroidota
TTT
Lys
>WENV170088124
CEAD01036436
280446
Bacteroidota
TTT
Lys
>WENV170087620
CEAD01012071
484496
Bacteroidota
TTG
Gln
>WENV170087672
CEAD01015296
484496
Bacteroidota
TTG
Gln
>WENV170088166
CEAD01037880
484496
Bacteroidota
TTG
Gln
>WENV170087444
CEAD01003835
27502
Bacteroidota
GGA
Ser
>WENV170087610
CEAD01011549
27502
Bacteroidota
GGA
Ser
>WENV170088040
CEAD01032390
285750
Bacteroidota
CCC
Gly
>WENV170088223
CEAD01040019
373714
Bacteroidota
GCC
Gly
>WENV170087676
CEAD01015605
188555
Bacteroidota
CAT
Met
>WENV170087625
CEAD01012465
186143
Bacteroidota
TGC
Ala
>WENV170087557
CEAD01008389
365112
Bacteroidota
TTT
Lys
>WENV170087803
CEAD01021210
365112
Bacteroidota
TTT
Lys
>WENV170088013
CEAD01031112
365112
Bacteroidota
TTT
Lys
>WENV170087564
CEAD01008969
398836
Bacteroidota
GCA
Cys
>WENV170087621
CEAD01012074
398836
Bacteroidota
GCA
Cys
>WENV170087663
CEAD01014664
398836
Bacteroidota
GCA
Cys
>WENV170087664
CEAD01014664
398836
Bacteroidota
GCA
Cys
>WENV170087691
CEAD01015937
398836
Bacteroidota
GCA
Cys
>WENV170087827
CEAD01022210
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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