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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
146 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170090979
CEAF01066129
295385
Bacteroidota
CCA
Trp
>WENV170090267
CEAF01038107
285360
Bacteroidota
TTT
Lys
>WENV170091087
CEAF01070225
285360
Bacteroidota
TTT
Lys
>WENV170089472
CEAF01008476
117741
Bacteroidota
TAG
Leu
>WENV170089526
CEAF01010140
398829
Bacteroidota
CCT
Arg
>WENV170089641
CEAF01014151
398829
Bacteroidota
CCT
Arg
>WENV170090926
CEAF01064020
175838
Bacteroidota
GTT
Asn
>WENV170090927
CEAF01064020
175838
Bacteroidota
GTT
Asn
>WENV170089646
CEAF01014705
404226
Bacteroidota
CCT
Arg
>WENV170089975
CEAF01026279
175904
Bacteroidota
CGG
Pro
>WENV170091118
CEAF01071464
175904
Bacteroidota
CGG
Pro
>WENV170089925
CEAF01023752
175904
Bacteroidota
CGG
Pro
>WENV170089374
CEAF01005134
289031
Bacteroidota
CAT
Met
>WENV170089848
CEAF01020956
289031
Bacteroidota
CAT
Met
>WENV170091104
CEAF01070849
289031
Bacteroidota
CAT
Met
>WENV170089309
CEAF01002918
280553
Bacteroidota
TTT
Lys
>WENV170089709
CEAF01015875
280553
Bacteroidota
TTT
Lys
>WENV170089852
CEAF01021397
280557
Bacteroidota
CAT
Met
>WENV170090097
CEAF01031202
280557
Bacteroidota
CAT
Met
>WENV170089638
CEAF01014111
20492
Bacteroidota
GGA
Ser
>WENV170091089
CEAF01070229
20206
Bacteroidota
GGA
Ser
>WENV170089336
CEAF01004046
483416
Bacteroidota
CTG
Gln
>WENV170089725
CEAF01016850
483416
Bacteroidota
CTG
Gln
>WENV170089307
CEAF01002918
398871
Bacteroidota
TTC
Glu
>WENV170089308
CEAF01002918
398871
Bacteroidota
TTC
Glu
>WENV170090670
CEAF01054040
201819
Bacteroidota
CAT
Met
>WENV170090401
CEAF01043215
56493
Bacteroidota
TGA
Ser
>WENV170090944
CEAF01064991
175906
Bacteroidota
GTG
His
>WENV170090945
CEAF01064991
175906
Bacteroidota
GTG
His
>WENV170089727
CEAF01016932
175903
Bacteroidota
GTG
His
>WENV170089248
CEAF01001198
351598
Bacteroidota
CGG
Pro
>WENV170089560
CEAF01011251
351598
Bacteroidota
CGG
Pro
>WENV170089740
CEAF01017442
351598
Bacteroidota
CGG
Pro
>WENV170089784
CEAF01019229
351598
Bacteroidota
CGG
Pro
>WENV170090059
CEAF01029473
351598
Bacteroidota
CGG
Pro
>WENV170090171
CEAF01033524
351598
Bacteroidota
CGG
Pro
>WENV170090241
CEAF01036935
351598
Bacteroidota
CGG
Pro
>WENV170090246
CEAF01037326
351598
Bacteroidota
CGG
Pro
>WENV170090488
CEAF01047175
351598
Bacteroidota
CGG
Pro
>WENV170090549
CEAF01049266
351598
Bacteroidota
CGG
Pro
>WENV170090934
CEAF01064883
351598
Bacteroidota
CGG
Pro
>WENV170090005
CEAF01027399
291612
Bacteroidota
>WENV170089437
CEAF01007331
118089
Bacteroidota
TAG
Leu
>WENV170090449
CEAF01045496
118089
Bacteroidota
TAG
Leu
>WENV170090057
CEAF01029449
398872
Bacteroidota
GGT
Thr
>WENV170091119
CEAF01071464
280530
Bacteroidota
CCA
Trp
>WENV170089795
CEAF01019710
203954
Bacteroidota
GTC
Asp
>WENV170090201
CEAF01034636
178907
Bacteroidota
TCT
Arg
>WENV170089342
CEAF01004071
29791
Bacteroidota
GCT
Ser
>WENV170089678
CEAF01015314
20449
Bacteroidota
GGA
Ser
>WENV170090478
CEAF01046593
20449
Bacteroidota
GGA
Ser
>WENV170089482
CEAF01009019
56072
Bacteroidota
TAA
Leu
>WENV170089712
CEAF01015950
56072
Bacteroidota
TAA
Leu
>WENV170090269
CEAF01038111
57807
Bacteroidota
TGA
Ser
>WENV170090412
CEAF01043717
175902
Bacteroidota
GGC
Ala
>WENV170090689
CEAF01054876
175902
Bacteroidota
GGC
Ala
>WENV170090624
CEAF01051826
398860
Bacteroidota
CTC
Glu
>WENV170089933
CEAF01024282
480404
Bacteroidota
TTG
Gln
>WENV170090056
CEAF01029401
480404
Bacteroidota
TTG
Gln
>WENV170090079
CEAF01030117
480404
Bacteroidota
TTG
Gln
>WENV170090192
CEAF01034179
480404
Bacteroidota
TTG
Gln
>WENV170090601
CEAF01051156
480404
Bacteroidota
TTG
Gln
>WENV170090203
CEAF01034647
174201
Bacteroidota
GGG
Pro
>WENV170090250
CEAF01037484
174201
Bacteroidota
GGG
Pro
>WENV170090617
CEAF01051558
174201
Bacteroidota
GGG
Pro
>WENV170089984
CEAF01026373
280451
Bacteroidota
CGT
Thr
>WENV170090006
CEAF01027434
418894
Bacteroidota
TTC
Glu
>WENV170089389
CEAF01005666
99847
Bacteroidota
GTA
Tyr
>WENV170089595
CEAF01012904
99847
Bacteroidota
GTA
Tyr
>WENV170089944
CEAF01024869
99847
Bacteroidota
GTA
Tyr
>WENV170090393
CEAF01043161
99847
Bacteroidota
GTA
Tyr
>WENV170090848
CEAF01061153
99847
Bacteroidota
GTA
Tyr
>WENV170089682
CEAF01015316
399200
Bacteroidota
CAT
Met
>WENV170090253
CEAF01037487
399200
Bacteroidota
CAT
Met
>WENV170091011
CEAF01067688
399200
Bacteroidota
CAT
Met
>WENV170089814
CEAF01020284
186874
Bacteroidota
CAT
Met
>WENV170090310
CEAF01039236
186874
Bacteroidota
CAT
Met
>WENV170090732
CEAF01057273
488746
Bacteroidota
CTG
Gln
>WENV170091088
CEAF01070229
488746
Bacteroidota
CTG
Gln
>WENV170089545
CEAF01010699
280478
Bacteroidota
GCC
Gly
>WENV170089547
CEAF01010699
280478
Bacteroidota
GCC
Gly
>WENV170090191
CEAF01034095
280478
Bacteroidota
GCC
Gly
>WENV170090413
CEAF01043718
280478
Bacteroidota
GCC
Gly
>WENV170090841
CEAF01060705
280478
Bacteroidota
GCC
Gly
>WENV170091060
CEAF01069115
280478
Bacteroidota
GCC
Gly
>WENV170089395
CEAF01005682
27524
Bacteroidota
GGA
Ser
>WENV170089245
CEAF01001167
186108
Bacteroidota
GTT
Asn
>WENV170089236
CEAF01000604
175844
Bacteroidota
GGC
Ala
>WENV170090444
CEAF01045019
175844
Bacteroidota
GGC
Ala
>WENV170090450
CEAF01045496
73011
Bacteroidota
CAA
Leu
>WENV170090581
CEAF01050605
183889
Bacteroidota
GGC
Ala
>WENV170090872
CEAF01062369
183889
Bacteroidota
GGC
Ala
>WENV170089762
CEAF01018620
480318
Bacteroidota
CTG
Gln
>WENV170089264
CEAF01002362
398828
Bacteroidota
CCG
Arg
>WENV170089680
CEAF01015314
74084
Bacteroidota
CAG
Leu
>WENV170090414
CEAF01043718
74084
Bacteroidota
CAG
Leu
>WENV170089625
CEAF01014069
159415
Bacteroidota
TAC
Val
>WENV170089626
CEAF01014069
159415
Bacteroidota
TAC
Val
>WENV170089627
CEAF01014069
159415
Bacteroidota
TAC
Val
>WENV170090140
CEAF01031950
159415
Bacteroidota
TAC
Val
>WENV170090141
CEAF01031950
159415
Bacteroidota
TAC
Val
>WENV170090869
CEAF01062352
159415
Bacteroidota
TAC
Val
>WENV170090870
CEAF01062352
159415
Bacteroidota
TAC
Val
>WENV170089796
CEAF01019710
480325
Bacteroidota
CTG
Gln
>WENV170090483
CEAF01047008
140771
Bacteroidota
>WENV170090708
CEAF01055731
140771
Bacteroidota
>WENV170090711
CEAF01055731
140771
Bacteroidota
>WENV170089710
CEAF01015892
176192
Bacteroidota
TCT
Arg
>WENV170090357
CEAF01040956
176192
Bacteroidota
TCT
Arg
>WENV170090480
CEAF01046626
176192
Bacteroidota
TCT
Arg
>WENV170090854
CEAF01061736
176192
Bacteroidota
TCT
Arg
>WENV170090867
CEAF01062351
400088
Bacteroidota
GGT
Thr
>WENV170089426
CEAF01006926
69204
Bacteroidota
TGA
Ser
>WENV170089764
CEAF01018628
69204
Bacteroidota
TGA
Ser
>WENV170089948
CEAF01024907
69204
Bacteroidota
TGA
Ser
>WENV170090258
CEAF01037489
69204
Bacteroidota
TGA
Ser
>WENV170090328
CEAF01039756
69204
Bacteroidota
TGA
Ser
>WENV170089760
CEAF01018539
280446
Bacteroidota
TTT
Lys
>WENV170089886
CEAF01022591
280446
Bacteroidota
TTT
Lys
>WENV170090251
CEAF01037484
280446
Bacteroidota
TTT
Lys
>WENV170090291
CEAF01038671
280446
Bacteroidota
TTT
Lys
>WENV170090351
CEAF01040914
280446
Bacteroidota
TTT
Lys
>WENV170090573
CEAF01050038
280446
Bacteroidota
TTT
Lys
>WENV170090607
CEAF01051163
280446
Bacteroidota
TTT
Lys
>WENV170090924
CEAF01064015
280446
Bacteroidota
TTT
Lys
>WENV170089400
CEAF01005757
484496
Bacteroidota
TTG
Gln
>WENV170089544
CEAF01010698
484496
Bacteroidota
TTG
Gln
>WENV170089261
CEAF01001796
27502
Bacteroidota
GGA
Ser
>WENV170089859
CEAF01021546
27502
Bacteroidota
GGA
Ser
>WENV170090446
CEAF01045270
27502
Bacteroidota
GGA
Ser
>WENV170090976
CEAF01066055
27502
Bacteroidota
GGA
Ser
>WENV170090977
CEAF01066106
27502
Bacteroidota
GGA
Ser
>WENV170089953
CEAF01025323
285750
Bacteroidota
CCC
Gly
>WENV170091070
CEAF01069653
285750
Bacteroidota
CCC
Gly
>WENV170089922
CEAF01023703
117804
Bacteroidota
TAG
Leu
>WENV170089731
CEAF01016946
365112
Bacteroidota
TTT
Lys
>WENV170090459
CEAF01045576
365112
Bacteroidota
TTT
Lys
>WENV170090722
CEAF01056736
365112
Bacteroidota
TTT
Lys
>WENV170090817
CEAF01060148
365112
Bacteroidota
TTT
Lys
>WENV170089478
CEAF01009018
398836
Bacteroidota
GCA
Cys
>WENV170089655
CEAF01014714
398836
Bacteroidota
GCA
Cys
>WENV170090331
CEAF01039824
398836
Bacteroidota
GCA
Cys
>WENV170091057
CEAF01069084
398836
Bacteroidota
GCA
Cys
>WENV170091071
CEAF01069684
398836
Bacteroidota
GCA
Cys
>WENV170091078
CEAF01070215
398836
Bacteroidota
GCA
Cys
>WENV170090652
CEAF01053441
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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