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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
107 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170094688
CEAI01004997
172207
Bacteroidota
GGG
Pro
>WENV170094897
CEAI01011976
172207
Bacteroidota
GGG
Pro
>WENV170094902
CEAI01011982
172207
Bacteroidota
GGG
Pro
>WENV170094727
CEAI01005865
117741
Bacteroidota
TAG
Leu
>WENV170095121
CEAI01018973
398829
Bacteroidota
CCT
Arg
>WENV170095189
CEAI01021805
398829
Bacteroidota
CCT
Arg
>WENV170095119
CEAI01018973
175838
Bacteroidota
GTT
Asn
>WENV170095120
CEAI01018973
175838
Bacteroidota
GTT
Asn
>WENV170095065
CEAI01017505
175904
Bacteroidota
CGG
Pro
>WENV170094755
CEAI01007010
289031
Bacteroidota
CAT
Met
>WENV170094892
CEAI01011792
289031
Bacteroidota
CAT
Met
>WENV170094949
CEAI01012898
280553
Bacteroidota
TTT
Lys
>WENV170095008
CEAI01015662
280557
Bacteroidota
CAT
Met
>WENV170095137
CEAI01019760
280557
Bacteroidota
CAT
Met
>WENV170094752
CEAI01007001
20492
Bacteroidota
GGA
Ser
>WENV170095086
CEAI01018286
20492
Bacteroidota
GGA
Ser
>WENV170094899
CEAI01011976
20206
Bacteroidota
GGA
Ser
>WENV170094656
CEAI01004287
483416
Bacteroidota
CTG
Gln
>WENV170094640
CEAI01003800
398871
Bacteroidota
TTC
Glu
>WENV170094980
CEAI01014387
398871
Bacteroidota
TTC
Glu
>WENV170094981
CEAI01014387
398871
Bacteroidota
TTC
Glu
>WENV170094624
CEAI01003500
201819
Bacteroidota
CAT
Met
>WENV170095248
CEAI01023845
175906
Bacteroidota
GTG
His
>WENV170095249
CEAI01023845
175906
Bacteroidota
GTG
His
>WENV170094561
CEAI01001003
175903
Bacteroidota
GTG
His
>WENV170094613
CEAI01003124
351598
Bacteroidota
CGG
Pro
>WENV170094627
CEAI01003504
351598
Bacteroidota
CGG
Pro
>WENV170094636
CEAI01003797
351598
Bacteroidota
CGG
Pro
>WENV170094702
CEAI01005733
351598
Bacteroidota
CGG
Pro
>WENV170095214
CEAI01023032
351598
Bacteroidota
CGG
Pro
>WENV170095235
CEAI01023420
351598
Bacteroidota
CGG
Pro
>WENV170094996
CEAI01014962
118089
Bacteroidota
TAG
Leu
>WENV170094880
CEAI01011533
398872
Bacteroidota
GGT
Thr
>WENV170095066
CEAI01017505
280530
Bacteroidota
CCA
Trp
>WENV170094720
CEAI01005743
175936
Bacteroidota
CAT
Met
>WENV170094960
CEAI01013463
178907
Bacteroidota
TCT
Arg
>WENV170094792
CEAI01008322
405877
Bacteroidota
GGT
Thr
>WENV170094989
CEAI01014767
29791
Bacteroidota
GCT
Ser
>WENV170095028
CEAI01016215
29791
Bacteroidota
GCT
Ser
>WENV170095036
CEAI01016578
20449
Bacteroidota
GGA
Ser
>WENV170095260
CEAI01024237
20449
Bacteroidota
GGA
Ser
>WENV170095123
CEAI01018973
56072
Bacteroidota
TAA
Leu
>WENV170094563
CEAI01001006
175902
Bacteroidota
GGC
Ala
>WENV170094677
CEAI01004785
398860
Bacteroidota
CTC
Glu
>WENV170094990
CEAI01014767
398860
Bacteroidota
CTC
Glu
>WENV170095029
CEAI01016215
398860
Bacteroidota
CTC
Glu
>WENV170095257
CEAI01024232
398860
Bacteroidota
CTC
Glu
>WENV170095225
CEAI01023289
480404
Bacteroidota
TTG
Gln
>WENV170094737
CEAI01006321
280451
Bacteroidota
CGT
Thr
>WENV170094594
CEAI01002374
99847
Bacteroidota
GTA
Tyr
>WENV170094917
CEAI01012374
99847
Bacteroidota
GTA
Tyr
>WENV170095097
CEAI01018498
99847
Bacteroidota
GTA
Tyr
>WENV170095125
CEAI01018973
99847
Bacteroidota
GTA
Tyr
>WENV170094823
CEAI01009513
399200
Bacteroidota
CAT
Met
>WENV170094963
CEAI01013502
399200
Bacteroidota
CAT
Met
>WENV170095030
CEAI01016216
186874
Bacteroidota
CAT
Met
>WENV170094898
CEAI01011976
488746
Bacteroidota
CTG
Gln
>WENV170095266
CEAI01024510
399026
Bacteroidota
CCT
Arg
>WENV170094732
CEAI01006091
280478
Bacteroidota
GCC
Gly
>WENV170094957
CEAI01013114
280478
Bacteroidota
GCC
Gly
>WENV170095170
CEAI01020816
186108
Bacteroidota
GTT
Asn
>WENV170095171
CEAI01020816
186108
Bacteroidota
GTT
Asn
>WENV170094956
CEAI01013111
280532
Bacteroidota
>WENV170094991
CEAI01014768
229246
Bacteroidota
GGC
Ala
>WENV170094995
CEAI01014962
73011
Bacteroidota
CAA
Leu
>WENV170095278
CEAI01024873
398828
Bacteroidota
CCG
Arg
>WENV170094733
CEAI01006091
74084
Bacteroidota
CAG
Leu
>WENV170095014
CEAI01015663
74084
Bacteroidota
CAG
Leu
>WENV170094581
CEAI01001584
480325
Bacteroidota
CTG
Gln
>WENV170094582
CEAI01001584
480325
Bacteroidota
CTG
Gln
>WENV170094745
CEAI01006508
140771
Bacteroidota
>WENV170094748
CEAI01006508
140771
Bacteroidota
>WENV170095196
CEAI01022252
140771
Bacteroidota
>WENV170094662
CEAI01004472
176192
Bacteroidota
TCT
Arg
>WENV170094804
CEAI01008855
176192
Bacteroidota
TCT
Arg
>WENV170095084
CEAI01018214
176192
Bacteroidota
TCT
Arg
>WENV170094556
CEAI01000868
69204
Bacteroidota
TGA
Ser
>WENV170094780
CEAI01007963
69204
Bacteroidota
TGA
Ser
>WENV170094951
CEAI01012900
69204
Bacteroidota
TGA
Ser
>WENV170095176
CEAI01021017
69204
Bacteroidota
TGA
Ser
>WENV170095179
CEAI01021162
69204
Bacteroidota
TGA
Ser
>WENV170095099
CEAI01018498
280446
Bacteroidota
TTT
Lys
>WENV170095168
CEAI01020809
280446
Bacteroidota
TTT
Lys
>WENV170094550
CEAI01000529
484496
Bacteroidota
TTG
Gln
>WENV170094642
CEAI01003953
484496
Bacteroidota
TTG
Gln
>WENV170094672
CEAI01004769
484496
Bacteroidota
TTG
Gln
>WENV170094673
CEAI01004772
484496
Bacteroidota
TTG
Gln
>WENV170094789
CEAI01008091
27502
Bacteroidota
GGA
Ser
>WENV170095040
CEAI01016584
285750
Bacteroidota
CCC
Gly
>WENV170095128
CEAI01018974
117804
Bacteroidota
TAG
Leu
>WENV170095243
CEAI01023826
186143
Bacteroidota
TGC
Ala
>WENV170094568
CEAI01001177
365112
Bacteroidota
TTT
Lys
>WENV170094575
CEAI01001510
365112
Bacteroidota
TTT
Lys
>WENV170094689
CEAI01004997
365112
Bacteroidota
TTT
Lys
>WENV170094738
CEAI01006430
365112
Bacteroidota
TTT
Lys
>WENV170094873
CEAI01011303
365112
Bacteroidota
TTT
Lys
>WENV170095081
CEAI01018075
365112
Bacteroidota
TTT
Lys
>WENV170095131
CEAI01019147
365112
Bacteroidota
TTT
Lys
>WENV170095133
CEAI01019330
365112
Bacteroidota
TTT
Lys
>WENV170095200
CEAI01022421
365112
Bacteroidota
TTT
Lys
>WENV170094601
CEAI01002641
398836
Bacteroidota
GCA
Cys
>WENV170094617
CEAI01003249
398836
Bacteroidota
GCA
Cys
>WENV170094721
CEAI01005749
398836
Bacteroidota
GCA
Cys
>WENV170094856
CEAI01010454
398836
Bacteroidota
GCA
Cys
>WENV170095274
CEAI01024690
398836
Bacteroidota
GCA
Cys
>WENV170094803
CEAI01008854
170323
Bacteroidota
GGG
Pro
>WENV170094882
CEAI01011536
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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