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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170095330
CEAJ01001997
295385
Bacteroidota
CCA
Trp
>WENV170095850
CEAJ01020689
295385
Bacteroidota
CCA
Trp
>WENV170095625
CEAJ01013387
285360
Bacteroidota
TTT
Lys
>WENV170095836
CEAJ01020287
117741
Bacteroidota
TAG
Leu
>WENV170095449
CEAJ01005540
398829
Bacteroidota
CCT
Arg
>WENV170095323
CEAJ01001997
175838
Bacteroidota
GTT
Asn
>WENV170095324
CEAJ01001997
175838
Bacteroidota
GTT
Asn
>WENV170095843
CEAJ01020689
175838
Bacteroidota
GTT
Asn
>WENV170095844
CEAJ01020689
175838
Bacteroidota
GTT
Asn
>WENV170095624
CEAJ01013194
175904
Bacteroidota
CGG
Pro
>WENV170095584
CEAJ01011519
400161
Bacteroidota
GGT
Thr
>WENV170095440
CEAJ01005278
289031
Bacteroidota
CAT
Met
>WENV170095649
CEAJ01013929
289031
Bacteroidota
CAT
Met
>WENV170095946
CEAJ01025791
289031
Bacteroidota
CAT
Met
>WENV170095475
CEAJ01005993
280557
Bacteroidota
CAT
Met
>WENV170095542
CEAJ01009143
280557
Bacteroidota
CAT
Met
>WENV170095364
CEAJ01002864
20492
Bacteroidota
GGA
Ser
>WENV170095492
CEAJ01006764
20492
Bacteroidota
GGA
Ser
>WENV170095519
CEAJ01008124
20206
Bacteroidota
GGA
Ser
>WENV170095817
CEAJ01019160
483416
Bacteroidota
CTG
Gln
>WENV170095957
CEAJ01026377
201819
Bacteroidota
CAT
Met
>WENV170095958
CEAJ01026377
201819
Bacteroidota
CAT
Met
>WENV170095415
CEAJ01004221
118221
Bacteroidota
CAA
Leu
>WENV170095706
CEAJ01016086
56493
Bacteroidota
TGA
Ser
>WENV170095522
CEAJ01008155
175903
Bacteroidota
GTG
His
>WENV170095322
CEAJ01001997
351598
Bacteroidota
CGG
Pro
>WENV170095346
CEAJ01002482
351598
Bacteroidota
CGG
Pro
>WENV170095856
CEAJ01020884
351598
Bacteroidota
CGG
Pro
>WENV170095562
CEAJ01010106
118089
Bacteroidota
TAG
Leu
>WENV170095469
CEAJ01005985
56385
Bacteroidota
TGA
Ser
>WENV170095893
CEAJ01023422
29791
Bacteroidota
GCT
Ser
>WENV170095920
CEAJ01024632
29791
Bacteroidota
GCT
Ser
>WENV170095643
CEAJ01013662
242241
Bacteroidota
GTC
Asp
>WENV170095644
CEAJ01013662
242241
Bacteroidota
GTC
Asp
>WENV170095422
CEAJ01004422
21127
Bacteroidota
GGA
Ser
>WENV170095559
CEAJ01010066
21127
Bacteroidota
GGA
Ser
>WENV170095326
CEAJ01001997
56072
Bacteroidota
TAA
Leu
>WENV170095766
CEAJ01017395
56072
Bacteroidota
TAA
Leu
>WENV170095846
CEAJ01020689
56072
Bacteroidota
TAA
Leu
>WENV170095399
CEAJ01003839
57807
Bacteroidota
TGA
Ser
>WENV170095464
CEAJ01005984
57807
Bacteroidota
TGA
Ser
>WENV170095671
CEAJ01014821
57807
Bacteroidota
TGA
Ser
>WENV170095752
CEAJ01016755
57807
Bacteroidota
TGA
Ser
>WENV170095359
CEAJ01002502
175902
Bacteroidota
GGC
Ala
>WENV170095290
CEAJ01000268
398860
Bacteroidota
CTC
Glu
>WENV170095921
CEAJ01024632
398860
Bacteroidota
CTC
Glu
>WENV170095607
CEAJ01012727
480404
Bacteroidota
TTG
Gln
>WENV170095654
CEAJ01014390
280451
Bacteroidota
CGT
Thr
>WENV170095328
CEAJ01001997
99847
Bacteroidota
GTA
Tyr
>WENV170095466
CEAJ01005984
99847
Bacteroidota
GTA
Tyr
>WENV170095478
CEAJ01006205
99847
Bacteroidota
GTA
Tyr
>WENV170095848
CEAJ01020689
99847
Bacteroidota
GTA
Tyr
>WENV170095532
CEAJ01008727
404109
Bacteroidota
CTC
Glu
>WENV170095533
CEAJ01008727
404109
Bacteroidota
CTC
Glu
>WENV170095658
CEAJ01014393
404109
Bacteroidota
CTC
Glu
>WENV170095659
CEAJ01014393
404109
Bacteroidota
CTC
Glu
>WENV170095660
CEAJ01014393
404109
Bacteroidota
CTC
Glu
>WENV170095904
CEAJ01023903
46648
Bacteroidota
TAA
Leu
>WENV170095439
CEAJ01005276
332896
Bacteroidota
TTT
Lys
>WENV170095604
CEAJ01012483
332896
Bacteroidota
TTT
Lys
>WENV170095827
CEAJ01019982
332896
Bacteroidota
TTT
Lys
>WENV170095865
CEAJ01021531
332896
Bacteroidota
TTT
Lys
>WENV170095518
CEAJ01008124
488746
Bacteroidota
CTG
Gln
>WENV170095441
CEAJ01005285
280478
Bacteroidota
GCC
Gly
>WENV170095463
CEAJ01005977
175844
Bacteroidota
GGC
Ala
>WENV170095655
CEAJ01014393
178134
Bacteroidota
TGG
Pro
>WENV170095656
CEAJ01014393
178134
Bacteroidota
TGG
Pro
>WENV170095517
CEAJ01008124
158068
Bacteroidota
GGG
Pro
>WENV170095635
CEAJ01013645
158068
Bacteroidota
GGG
Pro
>WENV170095686
CEAJ01015131
158068
Bacteroidota
GGG
Pro
>WENV170095820
CEAJ01019603
158068
Bacteroidota
GGG
Pro
>WENV170095546
CEAJ01009603
398828
Bacteroidota
CCG
Arg
>WENV170095388
CEAJ01003756
140771
Bacteroidota
>WENV170095391
CEAJ01003756
140771
Bacteroidota
>WENV170095394
CEAJ01003756
140771
Bacteroidota
>WENV170095315
CEAJ01001451
176192
Bacteroidota
TCT
Arg
>WENV170095753
CEAJ01016804
176192
Bacteroidota
TCT
Arg
>WENV170095888
CEAJ01023085
176192
Bacteroidota
TCT
Arg
>WENV170095906
CEAJ01023903
481328
Bacteroidota
TTG
Gln
>WENV170095767
CEAJ01017395
280446
Bacteroidota
TTT
Lys
>WENV170095796
CEAJ01018095
280446
Bacteroidota
TTT
Lys
>WENV170095407
CEAJ01003978
484496
Bacteroidota
TTG
Gln
>WENV170095696
CEAJ01015336
484496
Bacteroidota
TTG
Gln
>WENV170095778
CEAJ01017741
484496
Bacteroidota
TTG
Gln
>WENV170095837
CEAJ01020307
484496
Bacteroidota
TTG
Gln
>WENV170095479
CEAJ01006233
285750
Bacteroidota
CCC
Gly
>WENV170095608
CEAJ01012728
117804
Bacteroidota
TAG
Leu
>WENV170095566
CEAJ01010453
186143
Bacteroidota
TGC
Ala
>WENV170095446
CEAJ01005518
398836
Bacteroidota
GCA
Cys
>WENV170095592
CEAJ01011677
398836
Bacteroidota
GCA
Cys
>WENV170095814
CEAJ01019149
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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