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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
89 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170097540
CEAL01034499
295385
Bacteroidota
CCA
Trp
>WENV170097097
CEAL01011558
117741
Bacteroidota
TAG
Leu
>WENV170097611
CEAL01037801
398829
Bacteroidota
CCT
Arg
>WENV170097267
CEAL01019251
175838
Bacteroidota
GTT
Asn
>WENV170097268
CEAL01019251
175838
Bacteroidota
GTT
Asn
>WENV170097269
CEAL01019251
175838
Bacteroidota
GTT
Asn
>WENV170097541
CEAL01034499
175838
Bacteroidota
GTT
Asn
>WENV170097542
CEAL01034499
175838
Bacteroidota
GTT
Asn
>WENV170097543
CEAL01034499
175838
Bacteroidota
GTT
Asn
>WENV170097595
CEAL01037195
175904
Bacteroidota
CGG
Pro
>WENV170097566
CEAL01035329
400161
Bacteroidota
GGT
Thr
>WENV170096865
CEAL01000130
289031
Bacteroidota
CAT
Met
>WENV170097397
CEAL01026927
289031
Bacteroidota
CAT
Met
>WENV170097292
CEAL01020635
280557
Bacteroidota
CAT
Met
>WENV170096915
CEAL01002446
20206
Bacteroidota
GGA
Ser
>WENV170097405
CEAL01027479
20206
Bacteroidota
GGA
Ser
>WENV170096878
CEAL01001010
201819
Bacteroidota
CAT
Met
>WENV170096879
CEAL01001010
201819
Bacteroidota
CAT
Met
>WENV170097092
CEAL01011213
118221
Bacteroidota
CAA
Leu
>WENV170097160
CEAL01014462
56493
Bacteroidota
TGA
Ser
>WENV170097572
CEAL01035670
56493
Bacteroidota
TGA
Ser
>WENV170096980
CEAL01005681
175903
Bacteroidota
GTG
His
>WENV170096898
CEAL01001880
351598
Bacteroidota
CGG
Pro
>WENV170097044
CEAL01008628
351598
Bacteroidota
CGG
Pro
>WENV170097063
CEAL01009374
351598
Bacteroidota
CGG
Pro
>WENV170097586
CEAL01036707
351598
Bacteroidota
CGG
Pro
>WENV170097139
CEAL01013270
118089
Bacteroidota
TAG
Leu
>WENV170097126
CEAL01012773
203954
Bacteroidota
GTC
Asp
>WENV170097491
CEAL01032389
203954
Bacteroidota
GTC
Asp
>WENV170097208
CEAL01016806
56385
Bacteroidota
TGA
Ser
>WENV170097168
CEAL01014806
29791
Bacteroidota
GCT
Ser
>WENV170097214
CEAL01017386
29791
Bacteroidota
GCT
Ser
>WENV170097250
CEAL01018537
242241
Bacteroidota
GTC
Asp
>WENV170097251
CEAL01018537
242241
Bacteroidota
GTC
Asp
>WENV170097266
CEAL01019249
56072
Bacteroidota
TAA
Leu
>WENV170096900
CEAL01001881
57807
Bacteroidota
TGA
Ser
>WENV170097110
CEAL01012160
57807
Bacteroidota
TGA
Ser
>WENV170097442
CEAL01029361
57807
Bacteroidota
TGA
Ser
>WENV170096877
CEAL01001008
175902
Bacteroidota
GGC
Ala
>WENV170097152
CEAL01014122
398860
Bacteroidota
CTC
Glu
>WENV170097169
CEAL01014806
398860
Bacteroidota
CTC
Glu
>WENV170097215
CEAL01017386
398860
Bacteroidota
CTC
Glu
>WENV170097079
CEAL01010279
480404
Bacteroidota
TTG
Gln
>WENV170097409
CEAL01027751
280451
Bacteroidota
CGT
Thr
>WENV170096899
CEAL01001881
99847
Bacteroidota
GTA
Tyr
>WENV170096922
CEAL01002475
99847
Bacteroidota
GTA
Tyr
>WENV170097538
CEAL01034499
99847
Bacteroidota
GTA
Tyr
>WENV170096971
CEAL01005203
399200
Bacteroidota
CAT
Met
>WENV170097076
CEAL01009967
404109
Bacteroidota
CTC
Glu
>WENV170097077
CEAL01009967
404109
Bacteroidota
CTC
Glu
>WENV170096860
CEAL01000005
46648
Bacteroidota
TAA
Leu
>WENV170096914
CEAL01002446
488746
Bacteroidota
CTG
Gln
>WENV170097404
CEAL01027479
488746
Bacteroidota
CTG
Gln
>WENV170096941
CEAL01003770
280478
Bacteroidota
GCC
Gly
>WENV170097182
CEAL01015154
186108
Bacteroidota
GTT
Asn
>WENV170097179
CEAL01015154
186108
Bacteroidota
GTT
Asn
>WENV170097180
CEAL01015154
186108
Bacteroidota
GTT
Asn
>WENV170097181
CEAL01015154
186108
Bacteroidota
GTT
Asn
>WENV170097178
CEAL01015121
175844
Bacteroidota
GGC
Ala
>WENV170097322
CEAL01023121
175844
Bacteroidota
GGC
Ala
>WENV170097218
CEAL01017453
480318
Bacteroidota
CTG
Gln
>WENV170097393
CEAL01026617
480318
Bacteroidota
CTG
Gln
>WENV170097074
CEAL01009967
178134
Bacteroidota
TGG
Pro
>WENV170097599
CEAL01037480
398828
Bacteroidota
CCG
Arg
>WENV170097501
CEAL01032896
74084
Bacteroidota
CAG
Leu
>WENV170097601
CEAL01037482
140771
Bacteroidota
>WENV170097604
CEAL01037482
140771
Bacteroidota
>WENV170097464
CEAL01030722
176192
Bacteroidota
TCT
Arg
>WENV170096862
CEAL01000005
481328
Bacteroidota
TTG
Gln
>WENV170097468
CEAL01030959
400088
Bacteroidota
GGT
Thr
>WENV170096902
CEAL01001883
280446
Bacteroidota
TTT
Lys
>WENV170097032
CEAL01008312
280446
Bacteroidota
TTT
Lys
>WENV170097316
CEAL01022616
280446
Bacteroidota
TTT
Lys
>WENV170097511
CEAL01033531
280446
Bacteroidota
TTT
Lys
>WENV170097112
CEAL01012164
484496
Bacteroidota
TTG
Gln
>WENV170097146
CEAL01013896
484496
Bacteroidota
TTG
Gln
>WENV170097188
CEAL01015328
484496
Bacteroidota
TTG
Gln
>WENV170097216
CEAL01017445
484496
Bacteroidota
TTG
Gln
>WENV170097300
CEAL01021342
285750
Bacteroidota
CCC
Gly
>WENV170097284
CEAL01020291
117804
Bacteroidota
TAG
Leu
>WENV170097129
CEAL01012787
365112
Bacteroidota
TTT
Lys
>WENV170097489
CEAL01032168
365112
Bacteroidota
TTT
Lys
>WENV170097536
CEAL01034498
365112
Bacteroidota
TTT
Lys
>WENV170097170
CEAL01014823
398836
Bacteroidota
GCA
Cys
>WENV170097334
CEAL01023670
398836
Bacteroidota
GCA
Cys
>WENV170097616
CEAL01038444
398836
Bacteroidota
GCA
Cys
>WENV170096916
CEAL01002446
170323
Bacteroidota
GGG
Pro
>WENV170097406
CEAL01027479
170323
Bacteroidota
GGG
Pro
>WENV170097510
CEAL01033531
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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