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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170098059
CEAM01012764
117741
Bacteroidota
TAG
Leu
>WENV170097867
CEAM01007197
398829
Bacteroidota
CCT
Arg
>WENV170097925
CEAM01008403
398829
Bacteroidota
CCT
Arg
>WENV170097674
CEAM01001354
175838
Bacteroidota
GTT
Asn
>WENV170097675
CEAM01001354
175838
Bacteroidota
GTT
Asn
>WENV170097917
CEAM01008160
400161
Bacteroidota
GGT
Thr
>WENV170097683
CEAM01001357
156422
Bacteroidota
TAC
Val
>WENV170097789
CEAM01004981
156422
Bacteroidota
TAC
Val
>WENV170097877
CEAM01007631
280557
Bacteroidota
CAT
Met
>WENV170097762
CEAM01004604
20206
Bacteroidota
GGA
Ser
>WENV170097796
CEAM01005223
201819
Bacteroidota
CAT
Met
>WENV170097978
CEAM01009640
118221
Bacteroidota
CAA
Leu
>WENV170097944
CEAM01009073
56493
Bacteroidota
TGA
Ser
>WENV170098006
CEAM01010744
56493
Bacteroidota
TGA
Ser
>WENV170098087
CEAM01013489
175903
Bacteroidota
GTG
His
>WENV170097862
CEAM01007153
398872
Bacteroidota
GGT
Thr
>WENV170097911
CEAM01008030
56385
Bacteroidota
TGA
Ser
>WENV170098040
CEAM01011890
29791
Bacteroidota
GCT
Ser
>WENV170097918
CEAM01008160
312035
Bacteroidota
CCA
Trp
>WENV170097924
CEAM01008403
56072
Bacteroidota
TAA
Leu
>WENV170097895
CEAM01007884
57807
Bacteroidota
TGA
Ser
>WENV170097896
CEAM01007884
57807
Bacteroidota
TGA
Ser
>WENV170097946
CEAM01009074
57807
Bacteroidota
TGA
Ser
>WENV170097869
CEAM01007498
175902
Bacteroidota
GGC
Ala
>WENV170098041
CEAM01011890
398860
Bacteroidota
CTC
Glu
>WENV170097729
CEAM01003282
280451
Bacteroidota
CGT
Thr
>WENV170097677
CEAM01001354
99847
Bacteroidota
GTA
Tyr
>WENV170097693
CEAM01002070
99847
Bacteroidota
GTA
Tyr
>WENV170097949
CEAM01009092
99847
Bacteroidota
GTA
Tyr
>WENV170098017
CEAM01011252
99847
Bacteroidota
GTA
Tyr
>WENV170097781
CEAM01004899
404109
Bacteroidota
CTC
Glu
>WENV170097782
CEAM01004899
404109
Bacteroidota
CTC
Glu
>WENV170097783
CEAM01004899
404109
Bacteroidota
CTC
Glu
>WENV170097975
CEAM01009637
46648
Bacteroidota
TAA
Leu
>WENV170097761
CEAM01004463
332896
Bacteroidota
TTT
Lys
>WENV170098028
CEAM01011357
332896
Bacteroidota
TTT
Lys
>WENV170098039
CEAM01011890
332896
Bacteroidota
TTT
Lys
>WENV170097766
CEAM01004609
488746
Bacteroidota
CTG
Gln
>WENV170097784
CEAM01004899
187814
Bacteroidota
GTC
Asp
>WENV170097785
CEAM01004899
187814
Bacteroidota
GTC
Asp
>WENV170097902
CEAM01007946
187814
Bacteroidota
GTC
Asp
>WENV170097903
CEAM01007946
187814
Bacteroidota
GTC
Asp
>WENV170097690
CEAM01001591
158068
Bacteroidota
GGG
Pro
>WENV170098037
CEAM01011621
158068
Bacteroidota
GGG
Pro
>WENV170097865
CEAM01007196
398828
Bacteroidota
CCG
Arg
>WENV170097866
CEAM01007196
398828
Bacteroidota
CCG
Arg
>WENV170097804
CEAM01005450
140771
Bacteroidota
>WENV170097941
CEAM01008965
140771
Bacteroidota
>WENV170098008
CEAM01010877
176192
Bacteroidota
TCT
Arg
>WENV170097974
CEAM01009637
481328
Bacteroidota
TTG
Gln
>WENV170097744
CEAM01003611
280446
Bacteroidota
TTT
Lys
>WENV170097742
CEAM01003477
484496
Bacteroidota
TTG
Gln
>WENV170097929
CEAM01008658
484496
Bacteroidota
TTG
Gln
>WENV170097760
CEAM01004460
398836
Bacteroidota
GCA
Cys
>WENV170097930
CEAM01008661
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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