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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170099632
CEAP01005593
295385
Bacteroidota
CCA
Trp
>WENV170099646
CEAP01006195
117741
Bacteroidota
TAG
Leu
>WENV170099720
CEAP01009361
398829
Bacteroidota
CCT
Arg
>WENV170099978
CEAP01017345
398829
Bacteroidota
CCT
Arg
>WENV170099485
CEAP01001122
175838
Bacteroidota
GTT
Asn
>WENV170099486
CEAP01001122
175838
Bacteroidota
GTT
Asn
>WENV170099905
CEAP01015347
175904
Bacteroidota
CGG
Pro
>WENV170099796
CEAP01011728
289031
Bacteroidota
CAT
Met
>WENV170100025
CEAP01018643
289031
Bacteroidota
CAT
Met
>WENV170099977
CEAP01017344
280553
Bacteroidota
TTT
Lys
>WENV170100002
CEAP01017903
280553
Bacteroidota
TTT
Lys
>WENV170099622
CEAP01005111
280557
Bacteroidota
CAT
Met
>WENV170099881
CEAP01014380
280557
Bacteroidota
CAT
Met
>WENV170099638
CEAP01005917
20492
Bacteroidota
GGA
Ser
>WENV170099535
CEAP01002624
20206
Bacteroidota
GGA
Ser
>WENV170099674
CEAP01007257
483416
Bacteroidota
CTG
Gln
>WENV170100008
CEAP01018200
483416
Bacteroidota
CTG
Gln
>WENV170099769
CEAP01010858
398871
Bacteroidota
TTC
Glu
>WENV170099770
CEAP01010858
398871
Bacteroidota
TTC
Glu
>WENV170099985
CEAP01017607
398871
Bacteroidota
TTC
Glu
>WENV170099986
CEAP01017607
398871
Bacteroidota
TTC
Glu
>WENV170099987
CEAP01017607
398871
Bacteroidota
TTC
Glu
>WENV170099744
CEAP01010024
201819
Bacteroidota
CAT
Met
>WENV170099806
CEAP01012153
201819
Bacteroidota
CAT
Met
>WENV170099807
CEAP01012153
201819
Bacteroidota
CAT
Met
>WENV170099619
CEAP01004957
56493
Bacteroidota
TGA
Ser
>WENV170099689
CEAP01007714
56493
Bacteroidota
TGA
Ser
>WENV170099790
CEAP01011452
56493
Bacteroidota
TGA
Ser
>WENV170099956
CEAP01016412
175906
Bacteroidota
GTG
His
>WENV170099957
CEAP01016412
175906
Bacteroidota
GTG
His
>WENV170099531
CEAP01002490
175903
Bacteroidota
GTG
His
>WENV170099700
CEAP01008436
175903
Bacteroidota
GTG
His
>WENV170099546
CEAP01002770
351598
Bacteroidota
CGG
Pro
>WENV170099647
CEAP01006215
351598
Bacteroidota
CGG
Pro
>WENV170099772
CEAP01010874
351598
Bacteroidota
CGG
Pro
>WENV170099909
CEAP01015459
351598
Bacteroidota
CGG
Pro
>WENV170099975
CEAP01017344
118089
Bacteroidota
TAG
Leu
>WENV170099561
CEAP01003514
398872
Bacteroidota
GGT
Thr
>WENV170099592
CEAP01004383
398872
Bacteroidota
GGT
Thr
>WENV170099906
CEAP01015347
280530
Bacteroidota
CCA
Trp
>WENV170099509
CEAP01001586
203954
Bacteroidota
GTC
Asp
>WENV170099510
CEAP01001586
203954
Bacteroidota
GTC
Asp
>WENV170099511
CEAP01001586
203954
Bacteroidota
GTC
Asp
>WENV170099645
CEAP01006072
178907
Bacteroidota
TCT
Arg
>WENV170099774
CEAP01011133
405877
Bacteroidota
GGT
Thr
>WENV170099742
CEAP01009940
29791
Bacteroidota
GCT
Ser
>WENV170099811
CEAP01012300
182267
Bacteroidota
GTT
Asn
>WENV170099848
CEAP01013646
182267
Bacteroidota
GTT
Asn
>WENV170099721
CEAP01009362
20449
Bacteroidota
GGA
Ser
>WENV170099839
CEAP01013479
20449
Bacteroidota
GGA
Ser
>WENV170099520
CEAP01002062
21127
Bacteroidota
GGA
Ser
>WENV170099724
CEAP01009366
56072
Bacteroidota
TAA
Leu
>WENV170099997
CEAP01017650
56072
Bacteroidota
TAA
Leu
>WENV170099518
CEAP01002061
57807
Bacteroidota
TGA
Ser
>WENV170099571
CEAP01003929
57807
Bacteroidota
TGA
Ser
>WENV170099649
CEAP01006355
57807
Bacteroidota
TGA
Ser
>WENV170099692
CEAP01007995
57807
Bacteroidota
TGA
Ser
>WENV170099888
CEAP01014695
175886
Bacteroidota
GGC
Ala
>WENV170099714
CEAP01009189
175902
Bacteroidota
GGC
Ala
>WENV170099981
CEAP01017366
175902
Bacteroidota
GGC
Ala
>WENV170099701
CEAP01008444
179697
Bacteroidota
TGT
Thr
>WENV170099743
CEAP01009940
398860
Bacteroidota
CTC
Glu
>WENV170099709
CEAP01008871
280451
Bacteroidota
CGT
Thr
>WENV170099572
CEAP01003936
418894
Bacteroidota
TTC
Glu
>WENV170099635
CEAP01005604
418894
Bacteroidota
TTC
Glu
>WENV170099636
CEAP01005604
418894
Bacteroidota
TTC
Glu
>WENV170099482
CEAP01001122
99847
Bacteroidota
GTA
Tyr
>WENV170099611
CEAP01004940
99847
Bacteroidota
GTA
Tyr
>WENV170099885
CEAP01014522
99847
Bacteroidota
GTA
Tyr
>WENV170099945
CEAP01016292
99847
Bacteroidota
GTA
Tyr
>WENV170100019
CEAP01018640
99847
Bacteroidota
GTA
Tyr
>WENV170099656
CEAP01006756
399200
Bacteroidota
CAT
Met
>WENV170099683
CEAP01007558
399200
Bacteroidota
CAT
Met
>WENV170099545
CEAP01002765
186874
Bacteroidota
CAT
Met
>WENV170100027
CEAP01018643
186874
Bacteroidota
CAT
Met
>WENV170099685
CEAP01007706
332896
Bacteroidota
TTT
Lys
>WENV170100004
CEAP01017906
332896
Bacteroidota
TTT
Lys
>WENV170100020
CEAP01018642
332896
Bacteroidota
TTT
Lys
>WENV170099506
CEAP01001582
488746
Bacteroidota
CTG
Gln
>WENV170099497
CEAP01001271
280478
Bacteroidota
GCC
Gly
>WENV170099870
CEAP01014123
280478
Bacteroidota
GCC
Gly
>WENV170099872
CEAP01014123
280478
Bacteroidota
GCC
Gly
>WENV170099669
CEAP01007101
175844
Bacteroidota
GGC
Ala
>WENV170099976
CEAP01017344
73011
Bacteroidota
CAA
Leu
>WENV170099970
CEAP01017180
280515
Bacteroidota
CCA
Trp
>WENV170099543
CEAP01002632
158068
Bacteroidota
GGG
Pro
>WENV170099725
CEAP01009514
158068
Bacteroidota
GGG
Pro
>WENV170099785
CEAP01011310
158068
Bacteroidota
GGG
Pro
>WENV170099884
CEAP01014522
158068
Bacteroidota
GGG
Pro
>WENV170099892
CEAP01015059
398828
Bacteroidota
CCG
Arg
>WENV170099498
CEAP01001271
74084
Bacteroidota
CAG
Leu
>WENV170099902
CEAP01015347
74084
Bacteroidota
CAG
Leu
>WENV170099802
CEAP01012031
159415
Bacteroidota
TAC
Val
>WENV170099803
CEAP01012031
159415
Bacteroidota
TAC
Val
>WENV170099940
CEAP01016248
480325
Bacteroidota
CTG
Gln
>WENV170099941
CEAP01016248
480325
Bacteroidota
CTG
Gln
>WENV170100017
CEAP01018556
480325
Bacteroidota
CTG
Gln
>WENV170100018
CEAP01018556
480325
Bacteroidota
CTG
Gln
>WENV170099947
CEAP01016335
140771
Bacteroidota
>WENV170099950
CEAP01016335
140771
Bacteroidota
>WENV170099584
CEAP01004276
176192
Bacteroidota
TCT
Arg
>WENV170099464
CEAP01000170
400088
Bacteroidota
GGT
Thr
>WENV170099532
CEAP01002514
280446
Bacteroidota
TTT
Lys
>WENV170099699
CEAP01008183
280446
Bacteroidota
TTT
Lys
>WENV170099856
CEAP01013944
280446
Bacteroidota
TTT
Lys
>WENV170100011
CEAP01018375
280446
Bacteroidota
TTT
Lys
>WENV170099523
CEAP01002171
484496
Bacteroidota
TTG
Gln
>WENV170099582
CEAP01004267
484496
Bacteroidota
TTG
Gln
>WENV170099648
CEAP01006355
484496
Bacteroidota
TTG
Gln
>WENV170099910
CEAP01015591
484496
Bacteroidota
TTG
Gln
>WENV170099849
CEAP01013807
285750
Bacteroidota
CCC
Gly
>WENV170099761
CEAP01010564
398836
Bacteroidota
GCA
Cys
>WENV170099832
CEAP01013199
398836
Bacteroidota
GCA
Cys
>WENV170099916
CEAP01015985
398836
Bacteroidota
GCA
Cys
>WENV170099942
CEAP01016248
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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