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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
129 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170105214
CEAZ01066109
117741
Bacteroidota
TAG
Leu
>WENV170105118
CEAZ01061862
398829
Bacteroidota
CCT
Arg
>WENV170104291
CEAZ01028201
175838
Bacteroidota
GTT
Asn
>WENV170105089
CEAZ01060955
404226
Bacteroidota
CCT
Arg
>WENV170104065
CEAZ01018408
175904
Bacteroidota
CGG
Pro
>WENV170104450
CEAZ01033500
175904
Bacteroidota
CGG
Pro
>WENV170104128
CEAZ01022198
289031
Bacteroidota
CAT
Met
>WENV170104543
CEAZ01037842
289031
Bacteroidota
CAT
Met
>WENV170104678
CEAZ01043863
289031
Bacteroidota
CAT
Met
>WENV170104930
CEAZ01054882
289031
Bacteroidota
CAT
Met
>WENV170103833
CEAZ01008721
280553
Bacteroidota
TTT
Lys
>WENV170104349
CEAZ01029810
280553
Bacteroidota
TTT
Lys
>WENV170104560
CEAZ01038415
280557
Bacteroidota
CAT
Met
>WENV170105172
CEAZ01064524
280557
Bacteroidota
CAT
Met
>WENV170103972
CEAZ01014423
20492
Bacteroidota
GGA
Ser
>WENV170104239
CEAZ01026071
20492
Bacteroidota
GGA
Ser
>WENV170103911
CEAZ01011860
20206
Bacteroidota
GGA
Ser
>WENV170104544
CEAZ01037842
483416
Bacteroidota
CTG
Gln
>WENV170105075
CEAZ01060391
483416
Bacteroidota
CTG
Gln
>WENV170104791
CEAZ01048329
398871
Bacteroidota
TTC
Glu
>WENV170104792
CEAZ01048329
398871
Bacteroidota
TTC
Glu
>WENV170105087
CEAZ01060955
398871
Bacteroidota
TTC
Glu
>WENV170105088
CEAZ01060955
398871
Bacteroidota
TTC
Glu
>WENV170104395
CEAZ01031733
201819
Bacteroidota
CAT
Met
>WENV170104396
CEAZ01031733
201819
Bacteroidota
CAT
Met
>WENV170104351
CEAZ01029811
56493
Bacteroidota
TGA
Ser
>WENV170104352
CEAZ01029811
56493
Bacteroidota
TGA
Ser
>WENV170105006
CEAZ01058501
56493
Bacteroidota
TGA
Ser
>WENV170105007
CEAZ01058501
56493
Bacteroidota
TGA
Ser
>WENV170104513
CEAZ01036277
175906
Bacteroidota
GTG
His
>WENV170105225
CEAZ01066646
175906
Bacteroidota
GTG
His
>WENV170104428
CEAZ01032933
175903
Bacteroidota
GTG
His
>WENV170103671
CEAZ01001530
351598
Bacteroidota
CGG
Pro
>WENV170103855
CEAZ01009391
351598
Bacteroidota
CGG
Pro
>WENV170104019
CEAZ01016671
351598
Bacteroidota
CGG
Pro
>WENV170104077
CEAZ01018991
351598
Bacteroidota
CGG
Pro
>WENV170104299
CEAZ01028206
351598
Bacteroidota
CGG
Pro
>WENV170104482
CEAZ01035183
351598
Bacteroidota
CGG
Pro
>WENV170105229
CEAZ01066654
351598
Bacteroidota
CGG
Pro
>WENV170104020
CEAZ01016739
118089
Bacteroidota
TAG
Leu
>WENV170104593
CEAZ01041010
118089
Bacteroidota
TAG
Leu
>WENV170104010
CEAZ01016278
398872
Bacteroidota
GGT
Thr
>WENV170104391
CEAZ01031301
175908
Bacteroidota
GTC
Asp
>WENV170104451
CEAZ01033500
280530
Bacteroidota
CCA
Trp
>WENV170103836
CEAZ01008724
203954
Bacteroidota
GTC
Asp
>WENV170104390
CEAZ01031301
203954
Bacteroidota
GTC
Asp
>WENV170104953
CEAZ01056021
178907
Bacteroidota
TCT
Arg
>WENV170103664
CEAZ01001523
172085
Bacteroidota
TAC
Val
>WENV170104793
CEAZ01048363
405877
Bacteroidota
GGT
Thr
>WENV170104261
CEAZ01027140
29791
Bacteroidota
GCT
Ser
>WENV170104247
CEAZ01026567
20449
Bacteroidota
GGA
Ser
>WENV170104787
CEAZ01048136
20449
Bacteroidota
GGA
Ser
>WENV170105091
CEAZ01060958
20449
Bacteroidota
GGA
Ser
>WENV170103969
CEAZ01014017
21127
Bacteroidota
GGA
Ser
>WENV170104683
CEAZ01044397
21127
Bacteroidota
GGA
Ser
>WENV170105120
CEAZ01061862
56072
Bacteroidota
TAA
Leu
>WENV170103696
CEAZ01002568
175902
Bacteroidota
GGC
Ala
>WENV170104262
CEAZ01027140
398860
Bacteroidota
CTC
Glu
>WENV170103810
CEAZ01007642
480404
Bacteroidota
TTG
Gln
>WENV170104975
CEAZ01057377
280451
Bacteroidota
CGT
Thr
>WENV170103799
CEAZ01007135
99847
Bacteroidota
GTA
Tyr
>WENV170104293
CEAZ01028201
99847
Bacteroidota
GTA
Tyr
>WENV170104477
CEAZ01035108
99847
Bacteroidota
GTA
Tyr
>WENV170104435
CEAZ01032980
399200
Bacteroidota
CAT
Met
>WENV170104878
CEAZ01051503
399200
Bacteroidota
CAT
Met
>WENV170105114
CEAZ01061860
399200
Bacteroidota
CAT
Met
>WENV170104231
CEAZ01025657
186874
Bacteroidota
CAT
Met
>WENV170104572
CEAZ01039272
186874
Bacteroidota
CAT
Met
>WENV170104673
CEAZ01043863
186874
Bacteroidota
CAT
Met
>WENV170103910
CEAZ01011860
488746
Bacteroidota
CTG
Gln
>WENV170103666
CEAZ01001523
280478
Bacteroidota
GCC
Gly
>WENV170103668
CEAZ01001523
280478
Bacteroidota
GCC
Gly
>WENV170103844
CEAZ01008799
280478
Bacteroidota
GCC
Gly
>WENV170103928
CEAZ01012405
280478
Bacteroidota
GCC
Gly
>WENV170103930
CEAZ01012405
280478
Bacteroidota
GCC
Gly
>WENV170103959
CEAZ01013862
280478
Bacteroidota
GCC
Gly
>WENV170104664
CEAZ01043333
280478
Bacteroidota
GCC
Gly
>WENV170104666
CEAZ01043333
280478
Bacteroidota
GCC
Gly
>WENV170104579
CEAZ01039718
175844
Bacteroidota
GGC
Ala
>WENV170105196
CEAZ01065594
175844
Bacteroidota
GGC
Ala
>WENV170105221
CEAZ01066193
175844
Bacteroidota
GGC
Ala
>WENV170104021
CEAZ01016739
73011
Bacteroidota
CAA
Leu
>WENV170104297
CEAZ01028202
183889
Bacteroidota
GGC
Ala
>WENV170104893
CEAZ01052629
480318
Bacteroidota
CTG
Gln
>WENV170104518
CEAZ01036679
158068
Bacteroidota
GGG
Pro
>WENV170104081
CEAZ01019443
186142
Bacteroidota
GAT
Ile
>WENV170104083
CEAZ01019483
398828
Bacteroidota
CCG
Arg
>WENV170104365
CEAZ01030305
398828
Bacteroidota
CCG
Arg
>WENV170103845
CEAZ01008799
74084
Bacteroidota
CAG
Leu
>WENV170104453
CEAZ01033500
74084
Bacteroidota
CAG
Leu
>WENV170105062
CEAZ01060336
480325
Bacteroidota
CTG
Gln
>WENV170105063
CEAZ01060336
480325
Bacteroidota
CTG
Gln
>WENV170103977
CEAZ01014432
140771
Bacteroidota
>WENV170104277
CEAZ01027690
140771
Bacteroidota
>WENV170104280
CEAZ01027690
140771
Bacteroidota
>WENV170104168
CEAZ01023335
176192
Bacteroidota
TCT
Arg
>WENV170104622
CEAZ01041626
176192
Bacteroidota
TCT
Arg
>WENV170104680
CEAZ01043894
176192
Bacteroidota
TCT
Arg
>WENV170104582
CEAZ01039791
400088
Bacteroidota
GGT
Thr
>WENV170103633
CEAZ01000011
69204
Bacteroidota
TGA
Ser
>WENV170103863
CEAZ01009780
69204
Bacteroidota
TGA
Ser
>WENV170104266
CEAZ01027168
69204
Bacteroidota
TGA
Ser
>WENV170105013
CEAZ01058516
69204
Bacteroidota
TGA
Ser
>WENV170105176
CEAZ01064996
69204
Bacteroidota
TGA
Ser
>WENV170103909
CEAZ01011860
280446
Bacteroidota
TTT
Lys
>WENV170104189
CEAZ01023923
280446
Bacteroidota
TTT
Lys
>WENV170105022
CEAZ01058989
280446
Bacteroidota
TTT
Lys
>WENV170104064
CEAZ01018402
484496
Bacteroidota
TTG
Gln
>WENV170104101
CEAZ01020638
484496
Bacteroidota
TTG
Gln
>WENV170104916
CEAZ01053781
484496
Bacteroidota
TTG
Gln
>WENV170105101
CEAZ01061458
484496
Bacteroidota
TTG
Gln
>WENV170103973
CEAZ01014427
285750
Bacteroidota
CCC
Gly
>WENV170104949
CEAZ01055978
285750
Bacteroidota
CCC
Gly
>WENV170104480
CEAZ01035143
117804
Bacteroidota
TAG
Leu
>WENV170104082
CEAZ01019443
186143
Bacteroidota
TGC
Ala
>WENV170103783
CEAZ01005960
365112
Bacteroidota
TTT
Lys
>WENV170104059
CEAZ01018395
365112
Bacteroidota
TTT
Lys
>WENV170104074
CEAZ01018934
365112
Bacteroidota
TTT
Lys
>WENV170104210
CEAZ01024409
365112
Bacteroidota
TTT
Lys
>WENV170104260
CEAZ01027140
365112
Bacteroidota
TTT
Lys
>WENV170104350
CEAZ01029811
365112
Bacteroidota
TTT
Lys
>WENV170104684
CEAZ01044404
365112
Bacteroidota
TTT
Lys
>WENV170105005
CEAZ01058501
365112
Bacteroidota
TTT
Lys
>WENV170103636
CEAZ01000502
398836
Bacteroidota
GCA
Cys
>WENV170104417
CEAZ01032345
398836
Bacteroidota
GCA
Cys
>WENV170104468
CEAZ01034547
398836
Bacteroidota
GCA
Cys
>WENV170105024
CEAZ01058989
398836
Bacteroidota
GCA
Cys
>WENV170105193
CEAZ01065594
398836
Bacteroidota
GCA
Cys
>WENV170103711
CEAZ01003524
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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