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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
62 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV170109811
CECB01007662
117741
Bacteroidota
TAG
Leu
>WENV170109743
CECB01006080
398829
Bacteroidota
CCT
Arg
>WENV170109803
CECB01007363
398829
Bacteroidota
CCT
Arg
>WENV170109681
CECB01005224
175838
Bacteroidota
GTT
Asn
>WENV170109682
CECB01005224
175838
Bacteroidota
GTT
Asn
>WENV170109795
CECB01007153
400161
Bacteroidota
GGT
Thr
>WENV170109566
CECB01003255
156422
Bacteroidota
TAC
Val
>WENV170109759
CECB01006449
280557
Bacteroidota
CAT
Met
>WENV170109506
CECB01002258
20206
Bacteroidota
GGA
Ser
>WENV170109635
CECB01004390
201819
Bacteroidota
CAT
Met
>WENV170109636
CECB01004390
201819
Bacteroidota
CAT
Met
>WENV170109452
CECB01001121
118221
Bacteroidota
CAA
Leu
>WENV170109412
CECB01000352
56493
Bacteroidota
TGA
Ser
>WENV170109805
CECB01007413
175903
Bacteroidota
GTG
His
>WENV170109500
CECB01002173
351598
Bacteroidota
CGG
Pro
>WENV170109809
CECB01007552
351598
Bacteroidota
CGG
Pro
>WENV170109603
CECB01003615
56385
Bacteroidota
TGA
Ser
>WENV170109423
CECB01000568
29791
Bacteroidota
GCT
Ser
>WENV170109796
CECB01007153
312035
Bacteroidota
CCA
Trp
>WENV170109823
CECB01007970
242241
Bacteroidota
GTC
Asp
>WENV170109824
CECB01007970
242241
Bacteroidota
GTC
Asp
>WENV170109825
CECB01007970
242241
Bacteroidota
GTC
Asp
>WENV170109826
CECB01007970
242241
Bacteroidota
GTC
Asp
>WENV170109742
CECB01006080
56072
Bacteroidota
TAA
Leu
>WENV170109583
CECB01003437
57807
Bacteroidota
TGA
Ser
>WENV170109563
CECB01003135
175902
Bacteroidota
GGC
Ala
>WENV170109750
CECB01006346
175902
Bacteroidota
GGC
Ala
>WENV170109424
CECB01000568
398860
Bacteroidota
CTC
Glu
>WENV170109797
CECB01007204
280451
Bacteroidota
CGT
Thr
>WENV170109471
CECB01001532
99847
Bacteroidota
GTA
Tyr
>WENV170109483
CECB01001745
99847
Bacteroidota
GTA
Tyr
>WENV170109684
CECB01005224
99847
Bacteroidota
GTA
Tyr
>WENV170109694
CECB01005355
99847
Bacteroidota
GTA
Tyr
>WENV170109519
CECB01002546
404109
Bacteroidota
CTC
Glu
>WENV170109520
CECB01002546
404109
Bacteroidota
CTC
Glu
>WENV170109521
CECB01002546
404109
Bacteroidota
CTC
Glu
>WENV170109827
CECB01007970
404109
Bacteroidota
CTC
Glu
>WENV170109828
CECB01007970
404109
Bacteroidota
CTC
Glu
>WENV170109665
CECB01004959
46648
Bacteroidota
TAA
Leu
>WENV170109674
CECB01005056
488746
Bacteroidota
CTG
Gln
>WENV170109680
CECB01005222
175844
Bacteroidota
GGC
Ala
>WENV170109638
CECB01004390
398828
Bacteroidota
CCG
Arg
>WENV170109647
CECB01004693
140771
Bacteroidota
>WENV170109650
CECB01004693
140771
Bacteroidota
>WENV170109769
CECB01006815
140771
Bacteroidota
>WENV170109771
CECB01006815
140771
Bacteroidota
>WENV170109713
CECB01005719
176192
Bacteroidota
TCT
Arg
>WENV170109667
CECB01004959
481328
Bacteroidota
TTG
Gln
>WENV170109705
CECB01005560
69204
Bacteroidota
TGA
Ser
>WENV170109727
CECB01005910
69204
Bacteroidota
TGA
Ser
>WENV170109804
CECB01007412
280446
Bacteroidota
TTT
Lys
>WENV170109444
CECB01000969
484496
Bacteroidota
TTG
Gln
>WENV170109467
CECB01001355
484496
Bacteroidota
TTG
Gln
>WENV170109484
CECB01001746
484496
Bacteroidota
TTG
Gln
>WENV170109806
CECB01007413
27502
Bacteroidota
GGA
Ser
>WENV170109473
CECB01001532
365112
Bacteroidota
TTT
Lys
>WENV170109560
CECB01003024
365112
Bacteroidota
TTT
Lys
>WENV170109760
CECB01006525
365112
Bacteroidota
TTT
Lys
>WENV170109505
CECB01002257
398836
Bacteroidota
GCA
Cys
>WENV170109601
CECB01003609
398836
Bacteroidota
GCA
Cys
>WENV170109517
CECB01002545
170323
Bacteroidota
GGG
Pro
>WENV170109790
CECB01007030
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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